FFCP PHASE1:Mm9::chr7:3629133..3629155,-: Difference between revisions
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|id=chr7:3629133..3629155,- | |id=chr7:3629133..3629155,- | ||
|ontology_enrichment_celltype=CL:0002563!2.81e-07!9;CL:0002251!2.81e-07!9 | |ontology_enrichment_celltype=CL:0002563!2.81e-07!9;CL:0002251!2.81e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.83e-08,9;CL:0002251,1.83e-08,9;CL:0000066,1.38e-07,25;CL:0002076,2.59e-07,15;CL:0000239,9.58e-07,6;CL:0000677,9.58e-07,6;CL:0000584,9.58e-07,6;CL:0000075,9.85e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.24e-24!130;UBERON:0000925!2.24e-24!130;UBERON:0006595!2.24e-24!130;UBERON:0001007!2.54e-23!128;UBERON:0001555!2.54e-23!128;UBERON:0007026!2.54e-23!128;UBERON:0005409!3.89e-23!59;UBERON:0000160!8.74e-23!43;UBERON:0004921!6.57e-22!126;UBERON:0004185!6.57e-22!126;UBERON:0000344!1.23e-11!15;UBERON:0001242!3.11e-10!13;UBERON:0000060!3.11e-10!13;UBERON:0001262!3.11e-10!13;UBERON:0004786!3.11e-10!13;UBERON:0004923!5.03e-09!24;UBERON:0002108!1.87e-08!16;UBERON:0000481!5.31e-08!230;UBERON:0000077!5.94e-08!97;UBERON:0003350!2.81e-07!9;UBERON:0004808!2.81e-07!9;UBERON:0001277!2.81e-07!9;UBERON:0000485!3.01e-07!11;UBERON:0000464!7.67e-07!57 | |ontology_enrichment_uberon=UBERON:0004119!2.24e-24!130;UBERON:0000925!2.24e-24!130;UBERON:0006595!2.24e-24!130;UBERON:0001007!2.54e-23!128;UBERON:0001555!2.54e-23!128;UBERON:0007026!2.54e-23!128;UBERON:0005409!3.89e-23!59;UBERON:0000160!8.74e-23!43;UBERON:0004921!6.57e-22!126;UBERON:0004185!6.57e-22!126;UBERON:0000344!1.23e-11!15;UBERON:0001242!3.11e-10!13;UBERON:0000060!3.11e-10!13;UBERON:0001262!3.11e-10!13;UBERON:0004786!3.11e-10!13;UBERON:0004923!5.03e-09!24;UBERON:0002108!1.87e-08!16;UBERON:0000481!5.31e-08!230;UBERON:0000077!5.94e-08!97;UBERON:0003350!2.81e-07!9;UBERON:0004808!2.81e-07!9;UBERON:0001277!2.81e-07!9;UBERON:0000485!3.01e-07!11;UBERON:0000464!7.67e-07!57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.96e-20,31;UBERON:0005409,1.46e-18,47;UBERON:0004119,9.17e-15,118;UBERON:0000925,9.17e-15,118;UBERON:0006595,9.17e-15,118;UBERON:0001007,7.76e-14,116;UBERON:0001555,7.76e-14,116;UBERON:0007026,7.76e-14,116;UBERON:0000344,1.02e-13,15;UBERON:0004921,1.28e-12,114;UBERON:0001242,5.04e-12,13;UBERON:0001262,5.04e-12,13;UBERON:0004786,5.04e-12,13;UBERON:0004923,1.41e-09,24;UBERON:0003350,1.83e-08,9;UBERON:0004808,1.83e-08,9;UBERON:0001277,1.83e-08,9;UBERON:0000485,2.00e-08,11;UBERON:0007023,6.48e-08,51;UBERON:0001008,1.08e-07,19;UBERON:0006554,3.34e-07,18;UBERON:0001264,9.10e-07,12 | |||
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| ||
|short_description=p3@Tmc4 | |short_description=p3@Tmc4 | ||
}} | }} |
Revision as of 19:59, 14 November 2012
Short description: | p3@Tmc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_181820, uc009evo.1_5end |
EntrezGene: | Tmc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.83e-08 | 9 |
epithelial cell of alimentary canal | 1.83e-08 | 9 |
epithelial cell | 1.38e-07 | 25 |
endo-epithelial cell | 2.59e-07 | 15 |
brush border epithelial cell | 9.58e-07 | 6 |
gut absorptive cell | 9.58e-07 | 6 |
enterocyte | 9.58e-07 | 6 |
columnar/cuboidal epithelial cell | 9.85e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.96e-20 | 31 |
gastrointestinal system | 1.46e-18 | 47 |
endoderm-derived structure | 9.17e-15 | 118 |
endoderm | 9.17e-15 | 118 |
presumptive endoderm | 9.17e-15 | 118 |
digestive system | 7.76e-14 | 116 |
digestive tract | 7.76e-14 | 116 |
primitive gut | 7.76e-14 | 116 |
mucosa | 1.02e-13 | 15 |
subdivision of digestive tract | 1.28e-12 | 114 |
intestinal mucosa | 5.04e-12 | 13 |
wall of intestine | 5.04e-12 | 13 |
gastrointestinal system mucosa | 5.04e-12 | 13 |
organ component layer | 1.41e-09 | 24 |
epithelium of mucosa | 1.83e-08 | 9 |
gastrointestinal system epithelium | 1.83e-08 | 9 |
intestinal epithelium | 1.83e-08 | 9 |
simple columnar epithelium | 2.00e-08 | 11 |
adult organism | 6.48e-08 | 51 |
renal system | 1.08e-07 | 19 |
urinary system structure | 3.34e-07 | 18 |
pancreas | 9.10e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.