FFCP PHASE1:Mm9::chr9:44521279..44521301,-: Difference between revisions
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|id=chr9:44521279..44521301,- | |id=chr9:44521279..44521301,- | ||
|ontology_enrichment_celltype=CL:0002563!2.97e-09!9;CL:0002251!2.97e-09!9;CL:0000239!8.40e-07!6;CL:0000677!8.40e-07!6;CL:0000212!8.40e-07!6;CL:0000584!8.40e-07!6 | |ontology_enrichment_celltype=CL:0002563!2.97e-09!9;CL:0002251!2.97e-09!9;CL:0000239!8.40e-07!6;CL:0000677!8.40e-07!6;CL:0000212!8.40e-07!6;CL:0000584!8.40e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.34e-11,9;CL:0002251,2.34e-11,9;CL:0000066,6.70e-07,25;CL:0002250,9.11e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.05e-18!59;UBERON:0000344!3.28e-15!15;UBERON:0000160!1.30e-14!43;UBERON:0001242!1.93e-13!13;UBERON:0000060!1.93e-13!13;UBERON:0001262!1.93e-13!13;UBERON:0004786!1.93e-13!13;UBERON:0004923!1.50e-09!24;UBERON:0003350!2.97e-09!9;UBERON:0004808!2.97e-09!9;UBERON:0001277!2.97e-09!9;UBERON:0004119!2.93e-08!130;UBERON:0000925!2.93e-08!130;UBERON:0006595!2.93e-08!130;UBERON:0001007!4.14e-08!128;UBERON:0001555!4.14e-08!128;UBERON:0007026!4.14e-08!128;UBERON:0004921!3.44e-07!126;UBERON:0004185!3.44e-07!126;UBERON:0000485!4.22e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!3.05e-18!59;UBERON:0000344!3.28e-15!15;UBERON:0000160!1.30e-14!43;UBERON:0001242!1.93e-13!13;UBERON:0000060!1.93e-13!13;UBERON:0001262!1.93e-13!13;UBERON:0004786!1.93e-13!13;UBERON:0004923!1.50e-09!24;UBERON:0003350!2.97e-09!9;UBERON:0004808!2.97e-09!9;UBERON:0001277!2.97e-09!9;UBERON:0004119!2.93e-08!130;UBERON:0000925!2.93e-08!130;UBERON:0006595!2.93e-08!130;UBERON:0001007!4.14e-08!128;UBERON:0001555!4.14e-08!128;UBERON:0007026!4.14e-08!128;UBERON:0004921!3.44e-07!126;UBERON:0004185!3.44e-07!126;UBERON:0000485!4.22e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.33e-37,47;UBERON:0000160,2.94e-29,31;UBERON:0000344,1.87e-23,15;UBERON:0001242,9.49e-20,13;UBERON:0001262,9.49e-20,13;UBERON:0004786,9.49e-20,13;UBERON:0001007,8.44e-16,116;UBERON:0001555,8.44e-16,116;UBERON:0007026,8.44e-16,116;UBERON:0004119,2.07e-15,118;UBERON:0000925,2.07e-15,118;UBERON:0006595,2.07e-15,118;UBERON:0004921,8.43e-14,114;UBERON:0004923,1.44e-13,24;UBERON:0003350,2.34e-11,9;UBERON:0004808,2.34e-11,9;UBERON:0001277,2.34e-11,9;UBERON:0002108,7.21e-10,4;UBERON:0000485,4.08e-09,11;UBERON:0000945,1.10e-08,16;UBERON:0010039,1.10e-08,16;UBERON:0000331,4.50e-08,3;UBERON:0002116,4.50e-08,3;UBERON:0001204,4.50e-08,3;UBERON:0001168,4.50e-08,3;UBERON:0007023,1.92e-07,51 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,3.0246421130683,3.00537437967808,2.85394762250213,2.33612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.75291137280604,1.72269589234506,1.7230479846363,1.50829862880122,4.94060890586572,4.28451220591882,2.66076612786366,0,0,0,1.73310971850765,1.66234645358492,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.11560453330835,0,0,0.128867461322093,0,0,0.380451252225118,3.79623249235609,0.494096864172033,1.00534083520108,0.795825888164603,1.9496408711912,5.39291645192533,4.75503709724327,5.17767310461355,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,2.96795255294664,0.322928853391811,0.844380948994182,0.358117032009409,0.656563598980245,1.7488850197791,0,0.170870880797853,0,0,0,0,0,0,0,0,10.5013767981662,0,0,1.72808545314882,4.39085421630384,3.27543845619266,2.56242258131159,1.98368293740806,7.59092231753686,13.0911123024711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,4.76133805591944,0,0,0,3.28422309854724,2.25218970541418,2.38097111547445,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.618105171716683,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0.697950815278722,0.909998478779072,3.0246421130683,3.00537437967808,2.85394762250213,2.33612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.75291137280604,1.72269589234506,1.7230479846363,1.50829862880122,4.94060890586572,4.28451220591882,2.66076612786366,0,0,0,1.73310971850765,1.66234645358492,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.11560453330835,0,0,0.128867461322093,0,0,0.380451252225118,3.79623249235609,0.494096864172033,1.00534083520108,0.795825888164603,1.9496408711912,5.39291645192533,4.75503709724327,5.17767310461355,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,2.96795255294664,0.322928853391811,0.844380948994182,0.358117032009409,0.656563598980245,1.7488850197791,0,0.170870880797853,0,0,0,0,0,0,0,0,10.5013767981662,0,0,1.72808545314882,4.39085421630384,3.27543845619266,2.56242258131159,1.98368293740806,7.59092231753686,13.0911123024711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,4.76133805591944,0,0,0,3.28422309854724,2.25218970541418,2.38097111547445,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.618105171716683,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p6@Phldb1 | |short_description=p6@Phldb1 | ||
}} | }} |
Revision as of 18:16, 14 November 2012
Short description: | p6@Phldb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Phldb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:306 |
Association with transcript: | 21bp_to_ENSMUST00000144251, uc009pef.1_5end |
EntrezGene: | Phldb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.34e-11 | 9 |
epithelial cell of alimentary canal | 2.34e-11 | 9 |
epithelial cell | 6.70e-07 | 25 |
intestinal crypt stem cell | 9.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.33e-37 | 47 |
intestine | 2.94e-29 | 31 |
mucosa | 1.87e-23 | 15 |
intestinal mucosa | 9.49e-20 | 13 |
wall of intestine | 9.49e-20 | 13 |
gastrointestinal system mucosa | 9.49e-20 | 13 |
digestive system | 8.44e-16 | 116 |
digestive tract | 8.44e-16 | 116 |
primitive gut | 8.44e-16 | 116 |
endoderm-derived structure | 2.07e-15 | 118 |
endoderm | 2.07e-15 | 118 |
presumptive endoderm | 2.07e-15 | 118 |
subdivision of digestive tract | 8.43e-14 | 114 |
organ component layer | 1.44e-13 | 24 |
epithelium of mucosa | 2.34e-11 | 9 |
gastrointestinal system epithelium | 2.34e-11 | 9 |
intestinal epithelium | 2.34e-11 | 9 |
small intestine | 7.21e-10 | 4 |
simple columnar epithelium | 4.08e-09 | 11 |
stomach | 1.10e-08 | 16 |
food storage organ | 1.10e-08 | 16 |
ileal mucosa | 4.50e-08 | 3 |
ileum | 4.50e-08 | 3 |
mucosa of small intestine | 4.50e-08 | 3 |
wall of small intestine | 4.50e-08 | 3 |
adult organism | 1.92e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.