FFCP PHASE1:Mm9::chr11:6173753..6173785,+: Difference between revisions
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|id=chr11:6173753..6173785,+ | |id=chr11:6173753..6173785,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.44e-12!9;CL:0002251!1.44e-12!9;CL:0000239!9.37e-10!6;CL:0000677!9.37e-10!6;CL:0000212!9.37e-10!6;CL:0000584!9.37e-10!6;CL:0000075!3.65e-08!7 | |ontology_enrichment_celltype=CL:0002563!1.44e-12!9;CL:0002251!1.44e-12!9;CL:0000239!9.37e-10!6;CL:0000677!9.37e-10!6;CL:0000212!9.37e-10!6;CL:0000584!9.37e-10!6;CL:0000075!3.65e-08!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.16e-19,6;CL:0000677,4.16e-19,6;CL:0000584,4.16e-19,6;CL:0002563,2.31e-16,9;CL:0002251,2.31e-16,9;CL:0000075,2.81e-16,7;CL:0000066,7.86e-11,25;CL:0000682,3.10e-10,3;CL:0002076,2.09e-09,15;CL:0000223,8.45e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.34e-32!43;UBERON:0005409!4.37e-26!59;UBERON:0000344!5.43e-20!15;UBERON:0001242!2.22e-17!13;UBERON:0000060!2.22e-17!13;UBERON:0001262!2.22e-17!13;UBERON:0004786!2.22e-17!13;UBERON:0003350!1.44e-12!9;UBERON:0004808!1.44e-12!9;UBERON:0001277!1.44e-12!9;UBERON:0004923!4.32e-12!24;UBERON:0001007!1.50e-10!128;UBERON:0001555!1.50e-10!128;UBERON:0007026!1.50e-10!128;UBERON:0004119!3.44e-10!130;UBERON:0000925!3.44e-10!130;UBERON:0006595!3.44e-10!130;UBERON:0000485!7.95e-10!11;UBERON:0004921!3.04e-09!126;UBERON:0004185!3.04e-09!126;UBERON:0002108!3.62e-08!16 | |ontology_enrichment_uberon=UBERON:0000160!1.34e-32!43;UBERON:0005409!4.37e-26!59;UBERON:0000344!5.43e-20!15;UBERON:0001242!2.22e-17!13;UBERON:0000060!2.22e-17!13;UBERON:0001262!2.22e-17!13;UBERON:0004786!2.22e-17!13;UBERON:0003350!1.44e-12!9;UBERON:0004808!1.44e-12!9;UBERON:0001277!1.44e-12!9;UBERON:0004923!4.32e-12!24;UBERON:0001007!1.50e-10!128;UBERON:0001555!1.50e-10!128;UBERON:0007026!1.50e-10!128;UBERON:0004119!3.44e-10!130;UBERON:0000925!3.44e-10!130;UBERON:0006595!3.44e-10!130;UBERON:0000485!7.95e-10!11;UBERON:0004921!3.04e-09!126;UBERON:0004185!3.04e-09!126;UBERON:0002108!3.62e-08!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.43e-42,31;UBERON:0000344,7.41e-32,15;UBERON:0001242,2.16e-26,13;UBERON:0001262,2.16e-26,13;UBERON:0004786,2.16e-26,13;UBERON:0005409,3.92e-26,47;UBERON:0004923,7.09e-19,24;UBERON:0003350,2.31e-16,9;UBERON:0004808,2.31e-16,9;UBERON:0001277,2.31e-16,9;UBERON:0000485,3.34e-13,11;UBERON:0002108,1.68e-11,4;UBERON:0001007,6.18e-10,116;UBERON:0001555,6.18e-10,116;UBERON:0007026,6.18e-10,116;UBERON:0004119,1.11e-09,118;UBERON:0000925,1.11e-09,118;UBERON:0006595,1.11e-09,118;UBERON:0000331,7.16e-09,3;UBERON:0002116,7.16e-09,3;UBERON:0001204,7.16e-09,3;UBERON:0001168,7.16e-09,3;UBERON:0004921,4.80e-08,114;UBERON:0001962,4.62e-07,2;UBERON:0001961,4.62e-07,2;UBERON:0001744,4.62e-07,2 | |||
|phase1_expression=0,26.8711063882308,22.7499619694768,25.4069937497737,25.0447864973174,5.87577451691614,5.37309073369709,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,4.63978026100879,6.19405058881359,21.8208146363708,11.1998119001359,12.7128027284675,1.52018735565099,2.77233142735924,3.10422714917427,0,0,0,0.577703239502549,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2167513193519,11.9002754998595,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.951128130562796,4.74529061544512,3.45867804920423,1.75934646160189,1.39269530428806,3.11942539390592,2.69645822596266,3.8904848977445,3.58454291857861,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0.863088412352432,0.810676133875177,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943025398779491,0.885905678642318,1.22974059177571,1.03371317267288,0,0.356497378384721,1.26414703174326,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,26.8711063882308,22.7499619694768,25.4069937497737,25.0447864973174,5.87577451691614,5.37309073369709,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,4.63978026100879,6.19405058881359,21.8208146363708,11.1998119001359,12.7128027284675,1.52018735565099,2.77233142735924,3.10422714917427,0,0,0,0.577703239502549,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2167513193519,11.9002754998595,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.951128130562796,4.74529061544512,3.45867804920423,1.75934646160189,1.39269530428806,3.11942539390592,2.69645822596266,3.8904848977445,3.58454291857861,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0.863088412352432,0.810676133875177,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943025398779491,0.885905678642318,1.22974059177571,1.03371317267288,0,0.356497378384721,1.26414703174326,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:6173753..6173785,+ | |short_description=p@chr11:6173753..6173785,+ | ||
}} | }} |
Revision as of 18:05, 14 November 2012
Short description: | p@chr11:6173753..6173785, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:6173753..6173785, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.16e-19 | 6 |
gut absorptive cell | 4.16e-19 | 6 |
enterocyte | 4.16e-19 | 6 |
intestinal epithelial cell | 2.31e-16 | 9 |
epithelial cell of alimentary canal | 2.31e-16 | 9 |
columnar/cuboidal epithelial cell | 2.81e-16 | 7 |
epithelial cell | 7.86e-11 | 25 |
M cell of gut | 3.10e-10 | 3 |
endo-epithelial cell | 2.09e-09 | 15 |
endodermal cell | 8.45e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.43e-42 | 31 |
mucosa | 7.41e-32 | 15 |
intestinal mucosa | 2.16e-26 | 13 |
wall of intestine | 2.16e-26 | 13 |
gastrointestinal system mucosa | 2.16e-26 | 13 |
gastrointestinal system | 3.92e-26 | 47 |
organ component layer | 7.09e-19 | 24 |
epithelium of mucosa | 2.31e-16 | 9 |
gastrointestinal system epithelium | 2.31e-16 | 9 |
intestinal epithelium | 2.31e-16 | 9 |
simple columnar epithelium | 3.34e-13 | 11 |
small intestine | 1.68e-11 | 4 |
digestive system | 6.18e-10 | 116 |
digestive tract | 6.18e-10 | 116 |
primitive gut | 6.18e-10 | 116 |
endoderm-derived structure | 1.11e-09 | 118 |
endoderm | 1.11e-09 | 118 |
presumptive endoderm | 1.11e-09 | 118 |
ileal mucosa | 7.16e-09 | 3 |
ileum | 7.16e-09 | 3 |
mucosa of small intestine | 7.16e-09 | 3 |
wall of small intestine | 7.16e-09 | 3 |
subdivision of digestive tract | 4.80e-08 | 114 |
gut-associated lymphoid tissue | 4.62e-07 | 2 |
mucosa-associated lymphoid tissue | 4.62e-07 | 2 |
lymphoid tissue | 4.62e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.