FFCP PHASE1:Mm9::chr10:66648428..66648445,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:66648428..66648445,+ | |id=chr10:66648428..66648445,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.26e-07!32;CL:0002032!3.26e-07!32;CL:0000037!3.26e-07!32;CL:0000566!3.26e-07!32;CL:0000837!3.26e-07!32 | |ontology_enrichment_celltype=CL:0000988!3.26e-07!32;CL:0002032!3.26e-07!32;CL:0000037!3.26e-07!32;CL:0000566!3.26e-07!32;CL:0000837!3.26e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.11e-12,32;CL:0002032,2.11e-12,32;CL:0000037,2.11e-12,32;CL:0000837,2.11e-12,32;CL:0000838,7.41e-10,12;CL:0002031,3.70e-09,25;CL:0000542,8.11e-09,13;CL:0000051,8.11e-09,13;CL:0000084,8.75e-09,11;CL:0000827,8.75e-09,11;CL:0002320,4.96e-08,46;CL:0000134,4.96e-08,46;CL:0000219,5.27e-08,54;CL:0000791,1.95e-07,9;CL:0000789,1.95e-07,9;CL:0002420,1.95e-07,9;CL:0002419,1.95e-07,9;CL:0000790,1.95e-07,9;CL:0000738,2.94e-07,17;CL:0002087,2.94e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.75e-09!48;UBERON:0002390!4.95e-08!45;UBERON:0003061!4.95e-08!45 | |ontology_enrichment_uberon=UBERON:0002193!2.75e-09!48;UBERON:0002390!4.95e-08!45;UBERON:0003061!4.95e-08!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.40e-15,48;UBERON:0002405,4.40e-15,48;UBERON:0002390,5.26e-13,45;UBERON:0003061,5.26e-13,45;UBERON:0004177,1.36e-09,29;UBERON:0005057,1.36e-09,29;UBERON:0002370,3.64e-08,23;UBERON:0000974,3.64e-08,23;UBERON:0004807,3.64e-08,23;UBERON:0005058,3.64e-08,23;UBERON:0003351,3.64e-08,23;UBERON:0009113,3.64e-08,23;UBERON:0003295,3.64e-08,23;UBERON:0009722,3.64e-08,23;UBERON:0005562,3.64e-08,23;UBERON:0007690,3.64e-08,23;UBERON:0002384,4.96e-08,46;UBERON:0000077,7.22e-08,35;UBERON:0006562,1.29e-07,24;UBERON:0003408,1.29e-07,24;UBERON:0001557,1.29e-07,24;UBERON:0001042,1.29e-07,24;UBERON:0008814,1.29e-07,24;UBERON:0009145,1.29e-07,24;UBERON:0003081,3.26e-07,87 | |||
|phase1_expression=1.28119077683835,2.79180326111489,1.81999695755814,3.0246421130683,3.50627010962443,0.503637815735669,0.700837921786577,4.77756296733832,7.74337971834167,10.0647746318457,0.34243593645101,1.11681022593471,3.93761678841773,4.28359971853087,1.33243904726265,2.42970320867791,0.699561878128147,7.88655413395594,9.73512478600745,9.33657233955666,0.510259740906419,2.58156473122302,1.56719873483361,1.75991665072747,1.83527424853736,2.29692785646008,0.430761996159075,0.430942465371778,0.950117097281869,1.00812051903972,1.10865255327652,0,0.61506478758457,0,0,0,0,0,0,0.523523743973798,5.88231488031014,0.683045484958446,0,2.01434908760924,1.31790010585369,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0,1.43752564364972,12.5836954543302,3.62681071005672,7.39406358113421,0.514518872071894,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,0.899899717281399,1.97773272513395,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.768032666281217,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0.711858403995515,0.372798891650601,3.02904773332736,3.24957708459178,2.6087803983151,0,0,0,0,0.896053774194671,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.5709193985953,9.06282592765101,0.593768556259299,0.173485326766136,0.608930956624282,0.922461989024234,1.05505848386836,1.05829836422134,0.251333182659351,0.741584903203122,0.289198713839823,1.76922110389975,0.323533699894818,0.441683036920787,1.45462575940567,0,1.17112318804619,0.628340120440365,0.766371165625774,6.35020159881377,1.79970819298022,3.55796635804581,0.898743836428936,0,0.502617408451458,0.347648640384553,0.767146371990992,1.0389402227978,0.648965052271031,0.407357455401265,1.99051152976149,0.505445516867349,0.420883711772948,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.544291993210623,0.896796041993948,0.562210347358373,2.06962696591213,0.215567992932842,0.378212160335639,1.23165786914764,0.876782929710299,0,0.348252166522167,0.823128545631774,0.199034266818493,1.40442637462647,2.57347907114715,1.13665399758237,1.03562886267751,0.234526059981096,0.540186184383045,0,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.817357396570186,0.493679549740441,0.32833492815819,1.37816976227955,0.584799949701329,1.75640092232841,0.671032093801859,0,0.411618449517138,1.98251269790279,1.32225283331772,0.426576501070468,0.232236671860439,0.515469845288373,0.403367049246685,1.11189021922435,0.760902504450237,0.474529061544512,1.64698954724011,1.00534083520108,1.1937388322469,1.55971269695296,0.898819408654221,1.08069024937347,1.1948476395262,0.189667900953082,0.571242563048644,0,0.203651327845314,0.969762435838129,0.350679099451593,0.69560190836683,0.147610147979602,1.8839847340965,0.123397163921801,0.592905254174298,0.500535317148282,0.196558995113203,0.899448449539415,0.811440485554012,0.482354319504834,0.50925170356284,0.575392274901621,1.78348749452539,0.823684239564244,0,1.11642284300551,0,0.757736633841335,0.538192240565737,1.4473305640901,1.29327233116623,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0.837531287209079,0.952174563544055,0.195133647857799,0.472905432318573,0.8858587585951,0.797273843287435,0.491589944147214,0.863424909329478,0.433947175744535,3.01582567878545,0,0.491764273019036,0.275936746304732,1.28440471990234,1.52375192569864,0,0.252470927204373,0,0,0.215423397732799,0.716906393857656,1.55959071857676,0.849229592366497,0.404810701674894,1.46127928955656,1.58115111178609,0.321321316421807,0.99358059645788,0.35613120733451,0.651547837414304,1.15479086080775,0,0.242780636154981,0,0.943025398779491,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0,0,1.05418608574999,1.03135543248187,2.38307724027652,0.36012218806262,0,0.214337035031592,1.06404140185364,0.713475270408282,0.329098041204242,0,0.23467170806371,0.42366414172764,0,1.15420377059036,1.13025098687134,0.844380948994182,1.79058516004705,0.984845398470368,0.874442509889552,0.370850604021019,1.87957968877638,0.412773735926445,0.740778109478847,2.0720530270516,2.1871076435364,2.0590035588587,10.8786195196067,12.5956307091292,11.3323978519628,0,0.158167996790568,0,0.540026704109006,0.627264888043406,0.87345025498471,0.674321731924103,0.578574190077352,0,0.648074866458964,0.621339313086926,0,0.598066184175915,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.58678619322877,0.2604087696879,0.314578033277133,0,0,4.10814456816632,0.202725215290164,0.821687657318618,1.03936658382236,1.79026695667481,2.18549490259391,1.56254084375959,0.738447635872886,2.82706059854813,2.97206545954499,3.7305688500631,3.41102582589133,2.98256709085021,5.96072201126002,0.680191150845634,0.221985953374065,0.269141569828427,0,0.19318959403219,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0.207574695168353,0,0.170733605754134,0.972426868273176,0.419226325255965,0.367687016900028,1.33348036680969,0,0.320919209591815,0.252697211763798,1.52087579934144,0.377252682772152,0.655490552289177,0.576226371643824,0.402048282689293,0,0.231768651889711,0.77163688185482,0,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.658765662907314,0.338458431566706,0.182927972872773,0.526139422875686,0.407412341537585,1.12228454331548,0.830445126869219,0.29551344712669,0.409231043169689,0.464810523557898,0.771626443924566,0.749431733813838,0.467863216890817,1.28922632428979,0.382576664137687,0.882365676478062,1.15933917810211 | |phase1_expression=1.28119077683835,2.79180326111489,1.81999695755814,3.0246421130683,3.50627010962443,0.503637815735669,0.700837921786577,4.77756296733832,7.74337971834167,10.0647746318457,0.34243593645101,1.11681022593471,3.93761678841773,4.28359971853087,1.33243904726265,2.42970320867791,0.699561878128147,7.88655413395594,9.73512478600745,9.33657233955666,0.510259740906419,2.58156473122302,1.56719873483361,1.75991665072747,1.83527424853736,2.29692785646008,0.430761996159075,0.430942465371778,0.950117097281869,1.00812051903972,1.10865255327652,0,0.61506478758457,0,0,0,0,0,0,0.523523743973798,5.88231488031014,0.683045484958446,0,2.01434908760924,1.31790010585369,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0,1.43752564364972,12.5836954543302,3.62681071005672,7.39406358113421,0.514518872071894,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,0.899899717281399,1.97773272513395,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.768032666281217,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0.711858403995515,0.372798891650601,3.02904773332736,3.24957708459178,2.6087803983151,0,0,0,0,0.896053774194671,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.5709193985953,9.06282592765101,0.593768556259299,0.173485326766136,0.608930956624282,0.922461989024234,1.05505848386836,1.05829836422134,0.251333182659351,0.741584903203122,0.289198713839823,1.76922110389975,0.323533699894818,0.441683036920787,1.45462575940567,0,1.17112318804619,0.628340120440365,0.766371165625774,6.35020159881377,1.79970819298022,3.55796635804581,0.898743836428936,0,0.502617408451458,0.347648640384553,0.767146371990992,1.0389402227978,0.648965052271031,0.407357455401265,1.99051152976149,0.505445516867349,0.420883711772948,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.544291993210623,0.896796041993948,0.562210347358373,2.06962696591213,0.215567992932842,0.378212160335639,1.23165786914764,0.876782929710299,0,0.348252166522167,0.823128545631774,0.199034266818493,1.40442637462647,2.57347907114715,1.13665399758237,1.03562886267751,0.234526059981096,0.540186184383045,0,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.817357396570186,0.493679549740441,0.32833492815819,1.37816976227955,0.584799949701329,1.75640092232841,0.671032093801859,0,0.411618449517138,1.98251269790279,1.32225283331772,0.426576501070468,0.232236671860439,0.515469845288373,0.403367049246685,1.11189021922435,0.760902504450237,0.474529061544512,1.64698954724011,1.00534083520108,1.1937388322469,1.55971269695296,0.898819408654221,1.08069024937347,1.1948476395262,0.189667900953082,0.571242563048644,0,0.203651327845314,0.969762435838129,0.350679099451593,0.69560190836683,0.147610147979602,1.8839847340965,0.123397163921801,0.592905254174298,0.500535317148282,0.196558995113203,0.899448449539415,0.811440485554012,0.482354319504834,0.50925170356284,0.575392274901621,1.78348749452539,0.823684239564244,0,1.11642284300551,0,0.757736633841335,0.538192240565737,1.4473305640901,1.29327233116623,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0.837531287209079,0.952174563544055,0.195133647857799,0.472905432318573,0.8858587585951,0.797273843287435,0.491589944147214,0.863424909329478,0.433947175744535,3.01582567878545,0,0.491764273019036,0.275936746304732,1.28440471990234,1.52375192569864,0,0.252470927204373,0,0,0.215423397732799,0.716906393857656,1.55959071857676,0.849229592366497,0.404810701674894,1.46127928955656,1.58115111178609,0.321321316421807,0.99358059645788,0.35613120733451,0.651547837414304,1.15479086080775,0,0.242780636154981,0,0.943025398779491,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0,0,1.05418608574999,1.03135543248187,2.38307724027652,0.36012218806262,0,0.214337035031592,1.06404140185364,0.713475270408282,0.329098041204242,0,0.23467170806371,0.42366414172764,0,1.15420377059036,1.13025098687134,0.844380948994182,1.79058516004705,0.984845398470368,0.874442509889552,0.370850604021019,1.87957968877638,0.412773735926445,0.740778109478847,2.0720530270516,2.1871076435364,2.0590035588587,10.8786195196067,12.5956307091292,11.3323978519628,0,0.158167996790568,0,0.540026704109006,0.627264888043406,0.87345025498471,0.674321731924103,0.578574190077352,0,0.648074866458964,0.621339313086926,0,0.598066184175915,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.58678619322877,0.2604087696879,0.314578033277133,0,0,4.10814456816632,0.202725215290164,0.821687657318618,1.03936658382236,1.79026695667481,2.18549490259391,1.56254084375959,0.738447635872886,2.82706059854813,2.97206545954499,3.7305688500631,3.41102582589133,2.98256709085021,5.96072201126002,0.680191150845634,0.221985953374065,0.269141569828427,0,0.19318959403219,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0.207574695168353,0,0.170733605754134,0.972426868273176,0.419226325255965,0.367687016900028,1.33348036680969,0,0.320919209591815,0.252697211763798,1.52087579934144,0.377252682772152,0.655490552289177,0.576226371643824,0.402048282689293,0,0.231768651889711,0.77163688185482,0,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.658765662907314,0.338458431566706,0.182927972872773,0.526139422875686,0.407412341537585,1.12228454331548,0.830445126869219,0.29551344712669,0.409231043169689,0.464810523557898,0.771626443924566,0.749431733813838,0.467863216890817,1.28922632428979,0.382576664137687,0.882365676478062,1.15933917810211 | ||
|short_description=p8@Jmjd1c | |short_description=p8@Jmjd1c | ||
}} | }} |
Revision as of 18:04, 14 November 2012
Short description: | p8@Jmjd1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Jmjd1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:640 |
Association with transcript: | -51bp_to_ENSMUST00000173661_5end |
EntrezGene: | Jmjd1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.11e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.11e-12 | 32 |
hematopoietic stem cell | 2.11e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.11e-12 | 32 |
lymphoid lineage restricted progenitor cell | 7.41e-10 | 12 |
hematopoietic lineage restricted progenitor cell | 3.70e-09 | 25 |
lymphocyte | 8.11e-09 | 13 |
common lymphoid progenitor | 8.11e-09 | 13 |
T cell | 8.75e-09 | 11 |
pro-T cell | 8.75e-09 | 11 |
connective tissue cell | 4.96e-08 | 46 |
mesenchymal cell | 4.96e-08 | 46 |
motile cell | 5.27e-08 | 54 |
mature alpha-beta T cell | 1.95e-07 | 9 |
alpha-beta T cell | 1.95e-07 | 9 |
immature T cell | 1.95e-07 | 9 |
mature T cell | 1.95e-07 | 9 |
immature alpha-beta T cell | 1.95e-07 | 9 |
leukocyte | 2.94e-07 | 17 |
nongranular leukocyte | 2.94e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.40e-15 | 48 |
immune system | 4.40e-15 | 48 |
hematopoietic system | 5.26e-13 | 45 |
blood island | 5.26e-13 | 45 |
hemopoietic organ | 1.36e-09 | 29 |
immune organ | 1.36e-09 | 29 |
thymus | 3.64e-08 | 23 |
neck | 3.64e-08 | 23 |
respiratory system epithelium | 3.64e-08 | 23 |
hemolymphoid system gland | 3.64e-08 | 23 |
pharyngeal epithelium | 3.64e-08 | 23 |
thymic region | 3.64e-08 | 23 |
pharyngeal gland | 3.64e-08 | 23 |
entire pharyngeal arch endoderm | 3.64e-08 | 23 |
thymus primordium | 3.64e-08 | 23 |
early pharyngeal endoderm | 3.64e-08 | 23 |
connective tissue | 4.96e-08 | 46 |
mixed endoderm/mesoderm-derived structure | 7.22e-08 | 35 |
pharynx | 1.29e-07 | 24 |
gland of gut | 1.29e-07 | 24 |
upper respiratory tract | 1.29e-07 | 24 |
chordate pharynx | 1.29e-07 | 24 |
pharyngeal arch system | 1.29e-07 | 24 |
pharyngeal region of foregut | 1.29e-07 | 24 |
lateral plate mesoderm | 3.26e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.