FFCP PHASE1:Mm9::chr7:135136684..135136699,-: Difference between revisions
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|id=chr7:135136684..135136699,- | |id=chr7:135136684..135136699,- | ||
|ontology_enrichment_celltype=CL:0002563!1.25e-10!9;CL:0002251!1.25e-10!9;CL:0000239!6.14e-07!6;CL:0000677!6.14e-07!6;CL:0000212!6.14e-07!6;CL:0000584!6.14e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.25e-10!9;CL:0002251!1.25e-10!9;CL:0000239!6.14e-07!6;CL:0000677!6.14e-07!6;CL:0000212!6.14e-07!6;CL:0000584!6.14e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.82e-14,9;CL:0002251,2.82e-14,9;CL:0002250,5.74e-10,3;CL:0000066,4.49e-09,25;CL:0000682,1.70e-08,3;CL:0002076,3.71e-08,15;CL:0000239,6.36e-07,6;CL:0000677,6.36e-07,6;CL:0000584,6.36e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.24e-23!59;UBERON:0000160!4.86e-23!43;UBERON:0000344!5.79e-17!15;UBERON:0001242!6.12e-15!13;UBERON:0000060!6.12e-15!13;UBERON:0001262!6.12e-15!13;UBERON:0004786!6.12e-15!13;UBERON:0001007!8.38e-15!128;UBERON:0001555!8.38e-15!128;UBERON:0007026!8.38e-15!128;UBERON:0004119!2.60e-14!130;UBERON:0000925!2.60e-14!130;UBERON:0006595!2.60e-14!130;UBERON:0004921!1.98e-13!126;UBERON:0004185!1.98e-13!126;UBERON:0003350!1.25e-10!9;UBERON:0004808!1.25e-10!9;UBERON:0001277!1.25e-10!9;UBERON:0004923!7.78e-10!24;UBERON:0000485!3.21e-08!11 | |ontology_enrichment_uberon=UBERON:0005409!3.24e-23!59;UBERON:0000160!4.86e-23!43;UBERON:0000344!5.79e-17!15;UBERON:0001242!6.12e-15!13;UBERON:0000060!6.12e-15!13;UBERON:0001262!6.12e-15!13;UBERON:0004786!6.12e-15!13;UBERON:0001007!8.38e-15!128;UBERON:0001555!8.38e-15!128;UBERON:0007026!8.38e-15!128;UBERON:0004119!2.60e-14!130;UBERON:0000925!2.60e-14!130;UBERON:0006595!2.60e-14!130;UBERON:0004921!1.98e-13!126;UBERON:0004185!1.98e-13!126;UBERON:0003350!1.25e-10!9;UBERON:0004808!1.25e-10!9;UBERON:0001277!1.25e-10!9;UBERON:0004923!7.78e-10!24;UBERON:0000485!3.21e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.63e-55,31;UBERON:0005409,2.86e-37,47;UBERON:0000344,4.77e-28,15;UBERON:0001242,1.41e-23,13;UBERON:0001262,1.41e-23,13;UBERON:0004786,1.41e-23,13;UBERON:0004923,1.80e-16,24;UBERON:0001007,2.76e-15,116;UBERON:0001555,2.76e-15,116;UBERON:0007026,2.76e-15,116;UBERON:0004119,6.37e-15,118;UBERON:0000925,6.37e-15,118;UBERON:0006595,6.37e-15,118;UBERON:0003350,2.82e-14,9;UBERON:0004808,2.82e-14,9;UBERON:0001277,2.82e-14,9;UBERON:0004921,4.02e-13,114;UBERON:0000485,1.70e-11,11;UBERON:0002108,2.03e-11,4;UBERON:0000331,7.28e-09,3;UBERON:0002116,7.28e-09,3;UBERON:0001204,7.28e-09,3;UBERON:0001168,7.28e-09,3 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,2.41971369045464,1.00179145989269,3.02182689441402,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,2.55987876469451,1.60586496747019,1.14846392823004,4.30761996159075,3.23206849028834,5.13063232532209,7.05684363327806,1.55211357458713,0,0,0,10.1098066912946,11.3039558843775,10.4126371693808,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,2.11560453330835,0,0,0.38660238396628,3.22693639397348,2.89091456998331,3.42406127002606,6.16887780007865,2.14108641141214,2.26201687920243,1.79060824837036,2.14460495831032,8.98819408654222,7.13255564586491,5.57595565112228,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0.161464426695906,0.120625849856312,0.238744688006273,0,5.24665505933731,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.540026704109006,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.948033361884535,0,0,0,0,0.198681354781265,0.480781798079875,0.295379054349154,0.504832249740738,0.381034033274999,0.504130925684203,0.682205165178267,0.962118416403295,1.5193997283604,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0.348975407639361,1.81999695755814,2.41971369045464,1.00179145989269,3.02182689441402,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,2.55987876469451,1.60586496747019,1.14846392823004,4.30761996159075,3.23206849028834,5.13063232532209,7.05684363327806,1.55211357458713,0,0,0,10.1098066912946,11.3039558843775,10.4126371693808,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,2.11560453330835,0,0,0.38660238396628,3.22693639397348,2.89091456998331,3.42406127002606,6.16887780007865,2.14108641141214,2.26201687920243,1.79060824837036,2.14460495831032,8.98819408654222,7.13255564586491,5.57595565112228,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0.161464426695906,0.120625849856312,0.238744688006273,0,5.24665505933731,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.540026704109006,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.948033361884535,0,0,0,0,0.198681354781265,0.480781798079875,0.295379054349154,0.504832249740738,0.381034033274999,0.504130925684203,0.682205165178267,0.962118416403295,1.5193997283604,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr7:135136684..135136699,- | |short_description=p@chr7:135136684..135136699,- | ||
}} | }} |
Revision as of 15:44, 14 November 2012
Short description: | p@chr7:135136684..135136699, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:135136684..135136699, - |
Coexpression cluster: | MCL_coexpression_mm9:474 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.82e-14 | 9 |
epithelial cell of alimentary canal | 2.82e-14 | 9 |
intestinal crypt stem cell | 5.74e-10 | 3 |
epithelial cell | 4.49e-09 | 25 |
M cell of gut | 1.70e-08 | 3 |
endo-epithelial cell | 3.71e-08 | 15 |
brush border epithelial cell | 6.36e-07 | 6 |
gut absorptive cell | 6.36e-07 | 6 |
enterocyte | 6.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.63e-55 | 31 |
gastrointestinal system | 2.86e-37 | 47 |
mucosa | 4.77e-28 | 15 |
intestinal mucosa | 1.41e-23 | 13 |
wall of intestine | 1.41e-23 | 13 |
gastrointestinal system mucosa | 1.41e-23 | 13 |
organ component layer | 1.80e-16 | 24 |
digestive system | 2.76e-15 | 116 |
digestive tract | 2.76e-15 | 116 |
primitive gut | 2.76e-15 | 116 |
endoderm-derived structure | 6.37e-15 | 118 |
endoderm | 6.37e-15 | 118 |
presumptive endoderm | 6.37e-15 | 118 |
epithelium of mucosa | 2.82e-14 | 9 |
gastrointestinal system epithelium | 2.82e-14 | 9 |
intestinal epithelium | 2.82e-14 | 9 |
subdivision of digestive tract | 4.02e-13 | 114 |
simple columnar epithelium | 1.70e-11 | 11 |
small intestine | 2.03e-11 | 4 |
ileal mucosa | 7.28e-09 | 3 |
ileum | 7.28e-09 | 3 |
mucosa of small intestine | 7.28e-09 | 3 |
wall of small intestine | 7.28e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.