FFCP PHASE1:Mm9::chr17:8533892..8533912,+: Difference between revisions
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|id=chr17:8533892..8533912,+ | |id=chr17:8533892..8533912,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.12e-17!23;CL:0000337!4.12e-17!23;CL:0000540!6.88e-13!33;CL:0000047!6.88e-13!33;CL:0000031!6.88e-13!33;CL:0000404!6.88e-13!33;CL:0002319!2.57e-10!43;CL:0000221!7.50e-10!44;CL:0000133!7.50e-10!44;CL:0000393!1.96e-09!39;CL:0000211!1.96e-09!39;CL:0000055!1.66e-07!50 | |ontology_enrichment_celltype=CL:0000117!4.12e-17!23;CL:0000337!4.12e-17!23;CL:0000540!6.88e-13!33;CL:0000047!6.88e-13!33;CL:0000031!6.88e-13!33;CL:0000404!6.88e-13!33;CL:0002319!2.57e-10!43;CL:0000221!7.50e-10!44;CL:0000133!7.50e-10!44;CL:0000393!1.96e-09!39;CL:0000211!1.96e-09!39;CL:0000055!1.66e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.93e-24,23;CL:0000337,8.93e-24,23;CL:0000540,3.41e-15,33;CL:0000047,3.41e-15,33;CL:0000031,3.41e-15,33;CL:0000404,3.41e-15,33;CL:0000393,3.56e-12,39;CL:0000211,3.56e-12,39;CL:0002319,5.06e-12,43;CL:0000221,1.21e-11,44;CL:0000133,1.21e-11,44;CL:0000120,1.90e-07,3;CL:0002613,2.30e-07,3;CL:0002612,4.48e-07,3;CL:0002610,7.82e-07,3;CL:0002614,8.18e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.87e-25!73;UBERON:0005743!1.87e-25!73;UBERON:0000073!3.38e-24!75;UBERON:0001016!3.38e-24!75;UBERON:0001049!2.35e-21!52;UBERON:0005068!2.35e-21!52;UBERON:0006241!2.35e-21!52;UBERON:0007135!2.35e-21!52;UBERON:0000955!5.63e-19!50;UBERON:0006238!5.63e-19!50;UBERON:0002616!1.77e-18!49;UBERON:0002346!1.95e-18!71;UBERON:0003075!1.95e-18!71;UBERON:0007284!1.95e-18!71;UBERON:0002020!1.98e-18!34;UBERON:0004121!5.15e-18!102;UBERON:0000924!5.15e-18!102;UBERON:0006601!5.15e-18!102;UBERON:0000033!8.11e-18!63;UBERON:0003056!1.17e-15!49;UBERON:0003080!1.60e-14!40;UBERON:0002791!5.12e-14!29;UBERON:0003528!5.12e-14!29;UBERON:0001893!5.12e-14!29;UBERON:0002780!8.79e-14!39;UBERON:0001890!8.79e-14!39;UBERON:0006240!8.79e-14!39;UBERON:0007811!7.66e-09!86;UBERON:0002420!4.56e-08!8;UBERON:0007245!4.56e-08!8;UBERON:0010009!4.56e-08!8;UBERON:0010011!4.56e-08!8;UBERON:0000454!4.56e-08!8;UBERON:0000956!6.18e-08!21;UBERON:0001869!6.18e-08!21;UBERON:0000203!6.18e-08!21;UBERON:0003076!1.02e-07!12;UBERON:0003057!1.02e-07!12;UBERON:0000153!2.55e-07!94;UBERON:0002240!5.06e-07!6;UBERON:0005174!5.06e-07!6;UBERON:0001137!5.06e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!1.87e-25!73;UBERON:0005743!1.87e-25!73;UBERON:0000073!3.38e-24!75;UBERON:0001016!3.38e-24!75;UBERON:0001049!2.35e-21!52;UBERON:0005068!2.35e-21!52;UBERON:0006241!2.35e-21!52;UBERON:0007135!2.35e-21!52;UBERON:0000955!5.63e-19!50;UBERON:0006238!5.63e-19!50;UBERON:0002616!1.77e-18!49;UBERON:0002346!1.95e-18!71;UBERON:0003075!1.95e-18!71;UBERON:0007284!1.95e-18!71;UBERON:0002020!1.98e-18!34;UBERON:0004121!5.15e-18!102;UBERON:0000924!5.15e-18!102;UBERON:0006601!5.15e-18!102;UBERON:0000033!8.11e-18!63;UBERON:0003056!1.17e-15!49;UBERON:0003080!1.60e-14!40;UBERON:0002791!5.12e-14!29;UBERON:0003528!5.12e-14!29;UBERON:0001893!5.12e-14!29;UBERON:0002780!8.79e-14!39;UBERON:0001890!8.79e-14!39;UBERON:0006240!8.79e-14!39;UBERON:0007811!7.66e-09!86;UBERON:0002420!4.56e-08!8;UBERON:0007245!4.56e-08!8;UBERON:0010009!4.56e-08!8;UBERON:0010011!4.56e-08!8;UBERON:0000454!4.56e-08!8;UBERON:0000956!6.18e-08!21;UBERON:0001869!6.18e-08!21;UBERON:0000203!6.18e-08!21;UBERON:0003076!1.02e-07!12;UBERON:0003057!1.02e-07!12;UBERON:0000153!2.55e-07!94;UBERON:0002240!5.06e-07!6;UBERON:0005174!5.06e-07!6;UBERON:0001137!5.06e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.29e-28,54;UBERON:0001017,1.21e-27,73;UBERON:0001016,1.12e-26,75;UBERON:0001049,5.14e-25,52;UBERON:0005068,5.14e-25,52;UBERON:0006241,5.14e-25,52;UBERON:0007135,5.14e-25,52;UBERON:0002020,1.97e-21,34;UBERON:0004121,2.86e-19,95;UBERON:0000924,2.86e-19,95;UBERON:0006601,2.86e-19,95;UBERON:0002346,5.62e-19,64;UBERON:0003075,5.62e-19,64;UBERON:0007284,5.62e-19,64;UBERON:0002616,4.41e-16,46;UBERON:0010371,9.26e-16,73;UBERON:0002420,1.00e-15,8;UBERON:0007245,1.00e-15,8;UBERON:0010009,1.00e-15,8;UBERON:0010011,1.00e-15,8;UBERON:0000454,1.00e-15,8;UBERON:0000955,1.27e-15,47;UBERON:0006238,1.27e-15,47;UBERON:0003076,6.06e-14,12;UBERON:0003057,6.06e-14,12;UBERON:0003528,1.17e-13,29;UBERON:0002791,1.17e-13,29;UBERON:0001893,1.17e-13,29;UBERON:0003080,1.71e-13,40;UBERON:0002240,1.85e-13,6;UBERON:0005174,1.85e-13,6;UBERON:0001137,1.85e-13,6;UBERON:0002780,2.63e-12,39;UBERON:0001890,2.63e-12,39;UBERON:0006240,2.63e-12,39;UBERON:0001948,2.62e-11,5;UBERON:0002315,2.62e-11,5;UBERON:0010314,4.63e-11,92;UBERON:0000369,1.71e-10,5;UBERON:0002435,1.71e-10,5;UBERON:0000204,1.71e-10,5;UBERON:0010082,1.71e-10,5;UBERON:0003056,3.65e-10,49;UBERON:0000025,5.15e-10,114;UBERON:0004111,7.14e-09,122;UBERON:0002950,1.62e-08,4;UBERON:0001891,1.62e-08,4;UBERON:0009616,1.62e-08,4;UBERON:0010286,1.62e-08,4;UBERON:0002021,4.09e-08,10;UBERON:0000411,4.09e-08,10;UBERON:0001950,4.09e-08,10;UBERON:0002257,4.48e-07,3;UBERON:0011216,6.23e-07,194;UBERON:0004684,7.82e-07,3;UBERON:0002275,7.82e-07,3;UBERON:0002038,8.18e-07,3;UBERON:0009663,8.18e-07,3;UBERON:0009661,8.18e-07,3;UBERON:0000125,8.18e-07,3;UBERON:0002308,8.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0.336093799142464,0,0,0,5.26022798234954,4.23192783417626,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.405017814995072,0.630974884054146,5.99867067247988,5.96345060569357,0.979926393719632,0.862609239164127,0,1.10115880999389,5.49055553766307,3.84016333140609,3.69281605644543,3.65950574409639,5.73004707612436,3.62937898701795,2.25105044012672,3.20876320331301,3.24091444021034,3.13217697758026,4.65998614563251,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,2.30391377494801,0,0,0,0,2.84602214869163,1.37250180845588,2.38743269014442,0.695297280769106,0.767146371990992,4.77912502486988,3.73154905055843,0,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.408218994907967,0.384341160854549,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.89260953707715,0.823236899034275,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,1.00503754465089,1.6663054862021,0.780534591431195,1.26108115284953,0,0.159454768657487,0,0,0.578596234326046,0,0,0,0,5.61927064957272,5.86058432961016,0,0,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,7.41701208042039,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,1.20297227640581,2.05524755931193,3.0215755895588,0.675022500231806,0.900642406448441,0,1.03552062350364,0,0,0.512200817262403,0.486213434136588,0.838452650511929,0.551530525350042,0.44449345560323,0.206035057238894,1.28367683836726,1.26348605881899,1.01391719956096,0.754505365544305,0.655490552289177,1.21647789569252,0.229741875822453,1.90517476513229,0.579421629724277,0,0.824171801606613,0.294397840268795,0,0.887379030796687,0.715308569841963,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.526139422875686,1.35804113845862,3.36685362994643,0.711810108745045,0.886540341380071,0,0.77468420592983,0.771626443924566,1.49886346762768,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0.336093799142464,0,0,0,5.26022798234954,4.23192783417626,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.405017814995072,0.630974884054146,5.99867067247988,5.96345060569357,0.979926393719632,0.862609239164127,0,1.10115880999389,5.49055553766307,3.84016333140609,3.69281605644543,3.65950574409639,5.73004707612436,3.62937898701795,2.25105044012672,3.20876320331301,3.24091444021034,3.13217697758026,4.65998614563251,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,2.30391377494801,0,0,0,0,2.84602214869163,1.37250180845588,2.38743269014442,0.695297280769106,0.767146371990992,4.77912502486988,3.73154905055843,0,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.408218994907967,0.384341160854549,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.89260953707715,0.823236899034275,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,1.00503754465089,1.6663054862021,0.780534591431195,1.26108115284953,0,0.159454768657487,0,0,0.578596234326046,0,0,0,0,5.61927064957272,5.86058432961016,0,0,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,7.41701208042039,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,1.20297227640581,2.05524755931193,3.0215755895588,0.675022500231806,0.900642406448441,0,1.03552062350364,0,0,0.512200817262403,0.486213434136588,0.838452650511929,0.551530525350042,0.44449345560323,0.206035057238894,1.28367683836726,1.26348605881899,1.01391719956096,0.754505365544305,0.655490552289177,1.21647789569252,0.229741875822453,1.90517476513229,0.579421629724277,0,0.824171801606613,0.294397840268795,0,0.887379030796687,0.715308569841963,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.526139422875686,1.35804113845862,3.36685362994643,0.711810108745045,0.886540341380071,0,0.77468420592983,0.771626443924566,1.49886346762768,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr17:8533892..8533912,+ | |short_description=p@chr17:8533892..8533912,+ | ||
}} | }} |
Revision as of 02:31, 14 November 2012
Short description: | p@chr17:8533892..8533912, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:8533892..8533912, + |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.93e-24 | 23 |
neuroblast (sensu Vertebrata) | 8.93e-24 | 23 |
neuron | 3.41e-15 | 33 |
neuronal stem cell | 3.41e-15 | 33 |
neuroblast | 3.41e-15 | 33 |
electrically signaling cell | 3.41e-15 | 33 |
electrically responsive cell | 3.56e-12 | 39 |
electrically active cell | 3.56e-12 | 39 |
neural cell | 5.06e-12 | 43 |
ectodermal cell | 1.21e-11 | 44 |
neurectodermal cell | 1.21e-11 | 44 |
granule cell | 1.90e-07 | 3 |
striatum neuron | 2.30e-07 | 3 |
neuron of the ventral spinal cord | 4.48e-07 | 3 |
raphe nuclei neuron | 7.82e-07 | 3 |
neuron of the substantia nigra | 8.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.