FFCP PHASE1:Mm9::chr12:111682896..111682907,+: Difference between revisions
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|id=chr12:111682896..111682907,+ | |id=chr12:111682896..111682907,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.65e-26!9;CL:0002251!4.65e-26!9;CL:0000239!2.55e-18!6;CL:0000677!2.55e-18!6;CL:0000212!2.55e-18!6;CL:0000584!2.55e-18!6;CL:0000075!1.35e-15!7;CL:0000066!4.42e-15!25;CL:0002076!6.15e-15!15;CL:0000223!9.08e-11!20;CL:0000473!1.05e-09!3;CL:0000627!1.05e-09!3;CL:0000682!1.05e-09!3;CL:0002250!2.61e-09!3 | |ontology_enrichment_celltype=CL:0002563!4.65e-26!9;CL:0002251!4.65e-26!9;CL:0000239!2.55e-18!6;CL:0000677!2.55e-18!6;CL:0000212!2.55e-18!6;CL:0000584!2.55e-18!6;CL:0000075!1.35e-15!7;CL:0000066!4.42e-15!25;CL:0002076!6.15e-15!15;CL:0000223!9.08e-11!20;CL:0000473!1.05e-09!3;CL:0000627!1.05e-09!3;CL:0000682!1.05e-09!3;CL:0002250!2.61e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.07e-48,9;CL:0002251,3.07e-48,9;CL:0000239,2.10e-41,6;CL:0000677,2.10e-41,6;CL:0000584,2.10e-41,6;CL:0000075,1.75e-35,7;CL:0000066,4.08e-32,25;CL:0002076,9.33e-29,15;CL:0000223,1.98e-21,20;CL:0000682,7.30e-21,3;CL:0002250,6.17e-10,3;CL:0000473,2.70e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!4.65e-26!9;UBERON:0004808!4.65e-26!9;UBERON:0001277!4.65e-26!9;UBERON:0000160!5.88e-25!43;UBERON:0000344!1.04e-21!15;UBERON:0001242!2.80e-21!13;UBERON:0000060!2.80e-21!13;UBERON:0001262!2.80e-21!13;UBERON:0004786!2.80e-21!13;UBERON:0000485!5.27e-21!11;UBERON:0005409!1.13e-18!59;UBERON:0004923!1.05e-12!24;UBERON:0001007!8.84e-07!128;UBERON:0001555!8.84e-07!128;UBERON:0007026!8.84e-07!128 | |ontology_enrichment_uberon=UBERON:0003350!4.65e-26!9;UBERON:0004808!4.65e-26!9;UBERON:0001277!4.65e-26!9;UBERON:0000160!5.88e-25!43;UBERON:0000344!1.04e-21!15;UBERON:0001242!2.80e-21!13;UBERON:0000060!2.80e-21!13;UBERON:0001262!2.80e-21!13;UBERON:0004786!2.80e-21!13;UBERON:0000485!5.27e-21!11;UBERON:0005409!1.13e-18!59;UBERON:0004923!1.05e-12!24;UBERON:0001007!8.84e-07!128;UBERON:0001555!8.84e-07!128;UBERON:0007026!8.84e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.07e-48,9;UBERON:0004808,3.07e-48,9;UBERON:0001277,3.07e-48,9;UBERON:0000485,2.17e-39,11;UBERON:0001242,2.94e-33,13;UBERON:0001262,2.94e-33,13;UBERON:0004786,2.94e-33,13;UBERON:0000344,9.33e-29,15;UBERON:0004923,9.30e-18,24;UBERON:0000160,4.26e-17,31;UBERON:0005409,5.43e-11,47;UBERON:0003929,2.41e-07,55 | |||
|phase1_expression=0,8.72438519098403,5.91499011206397,13.9133537201142,19.0340377379612,4.19698179779725,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,6.31655160526522,2.15380998079537,4.09395342103189,0.190023419456374,0,0,0,0,0,2.59966457776147,0.332469290716985,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,8.72438519098403,5.91499011206397,13.9133537201142,19.0340377379612,4.19698179779725,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,6.31655160526522,2.15380998079537,4.09395342103189,0.190023419456374,0,0,0,0,0,2.59966457776147,0.332469290716985,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:111682896..111682907,+ | |short_description=p@chr12:111682896..111682907,+ | ||
}} | }} |
Revision as of 21:40, 13 November 2012
Short description: | p@chr12:111682896..111682907, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111682896..111682907, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.07e-48 | 9 |
epithelial cell of alimentary canal | 3.07e-48 | 9 |
brush border epithelial cell | 2.10e-41 | 6 |
gut absorptive cell | 2.10e-41 | 6 |
enterocyte | 2.10e-41 | 6 |
columnar/cuboidal epithelial cell | 1.75e-35 | 7 |
epithelial cell | 4.08e-32 | 25 |
endo-epithelial cell | 9.33e-29 | 15 |
endodermal cell | 1.98e-21 | 20 |
M cell of gut | 7.30e-21 | 3 |
intestinal crypt stem cell | 6.17e-10 | 3 |
defensive cell | 2.70e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.07e-48 | 9 |
gastrointestinal system epithelium | 3.07e-48 | 9 |
intestinal epithelium | 3.07e-48 | 9 |
simple columnar epithelium | 2.17e-39 | 11 |
intestinal mucosa | 2.94e-33 | 13 |
wall of intestine | 2.94e-33 | 13 |
gastrointestinal system mucosa | 2.94e-33 | 13 |
mucosa | 9.33e-29 | 15 |
organ component layer | 9.30e-18 | 24 |
intestine | 4.26e-17 | 31 |
gastrointestinal system | 5.43e-11 | 47 |
gut epithelium | 2.41e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.