FFCP PHASE1:Mm9::chr14:56376667..56376693,+: Difference between revisions
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|id=chr14:56376667..56376693,+ | |id=chr14:56376667..56376693,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.01e-12!9;CL:0002251!8.01e-12!9;CL:0000239!1.69e-09!6;CL:0000677!1.69e-09!6;CL:0000212!1.69e-09!6;CL:0000584!1.69e-09!6;CL:0000075!5.87e-08!7;CL:0000066!6.41e-07!25 | |ontology_enrichment_celltype=CL:0002563!8.01e-12!9;CL:0002251!8.01e-12!9;CL:0000239!1.69e-09!6;CL:0000677!1.69e-09!6;CL:0000212!1.69e-09!6;CL:0000584!1.69e-09!6;CL:0000075!5.87e-08!7;CL:0000066!6.41e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.29e-18,6;CL:0000677,3.29e-18,6;CL:0000584,3.29e-18,6;CL:0002563,1.16e-15,9;CL:0002251,1.16e-15,9;CL:0000075,1.63e-15,7;CL:0000066,2.65e-10,25;CL:0000682,9.94e-10,3;CL:0002076,5.24e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.75e-23!43;UBERON:0005409!2.27e-22!59;UBERON:0000344!2.40e-19!15;UBERON:0001242!8.53e-17!13;UBERON:0000060!8.53e-17!13;UBERON:0001262!8.53e-17!13;UBERON:0004786!8.53e-17!13;UBERON:0004923!4.95e-15!24;UBERON:0003350!8.01e-12!9;UBERON:0004808!8.01e-12!9;UBERON:0001277!8.01e-12!9;UBERON:0004119!1.29e-10!130;UBERON:0000925!1.29e-10!130;UBERON:0006595!1.29e-10!130;UBERON:0001007!1.41e-09!128;UBERON:0001555!1.41e-09!128;UBERON:0007026!1.41e-09!128;UBERON:0000485!2.99e-09!11;UBERON:0004921!2.34e-08!126;UBERON:0004185!2.34e-08!126 | |ontology_enrichment_uberon=UBERON:0000160!3.75e-23!43;UBERON:0005409!2.27e-22!59;UBERON:0000344!2.40e-19!15;UBERON:0001242!8.53e-17!13;UBERON:0000060!8.53e-17!13;UBERON:0001262!8.53e-17!13;UBERON:0004786!8.53e-17!13;UBERON:0004923!4.95e-15!24;UBERON:0003350!8.01e-12!9;UBERON:0004808!8.01e-12!9;UBERON:0001277!8.01e-12!9;UBERON:0004119!1.29e-10!130;UBERON:0000925!1.29e-10!130;UBERON:0006595!1.29e-10!130;UBERON:0001007!1.41e-09!128;UBERON:0001555!1.41e-09!128;UBERON:0007026!1.41e-09!128;UBERON:0000485!2.99e-09!11;UBERON:0004921!2.34e-08!126;UBERON:0004185!2.34e-08!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-50,31;UBERON:0005409,1.82e-34,47;UBERON:0000344,5.38e-31,15;UBERON:0001242,9.41e-26,13;UBERON:0001262,9.41e-26,13;UBERON:0004786,9.41e-26,13;UBERON:0004923,2.35e-18,24;UBERON:0003350,1.16e-15,9;UBERON:0004808,1.16e-15,9;UBERON:0001277,1.16e-15,9;UBERON:0001007,2.02e-13,116;UBERON:0001555,2.02e-13,116;UBERON:0007026,2.02e-13,116;UBERON:0004119,4.21e-13,118;UBERON:0000925,4.21e-13,118;UBERON:0006595,4.21e-13,118;UBERON:0000485,1.22e-12,11;UBERON:0002108,2.32e-11,4;UBERON:0004921,3.17e-11,114;UBERON:0000331,7.16e-09,3;UBERON:0002116,7.16e-09,3;UBERON:0001204,7.16e-09,3;UBERON:0001168,7.16e-09,3;UBERON:0001962,7.94e-07,2;UBERON:0001961,7.94e-07,2;UBERON:0001744,7.94e-07,2 | |||
|phase1_expression=0,11.5161884520989,15.9249733786338,22.3823516367054,13.023288978605,1.51091344720701,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59973479776923,5.27641346454491,10.9104073181854,4.73838195774982,7.32602191132023,4.94060890586572,1.76421090831952,3.10422714917427,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.407271685558,7.66906643324278,0,0,0.128867461322093,0.80673409849337,1.77902435075896,3.04361001780095,10.9141684155238,6.25856027951241,6.78605063760728,3.18330355265841,2.72949721966768,5.39291645192533,10.8069024937347,11.3510525754989,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.436725127492355,0.674321731924103,0.41326727862668,1.04702376793612,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,11.5161884520989,15.9249733786338,22.3823516367054,13.023288978605,1.51091344720701,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59973479776923,5.27641346454491,10.9104073181854,4.73838195774982,7.32602191132023,4.94060890586572,1.76421090831952,3.10422714917427,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.407271685558,7.66906643324278,0,0,0.128867461322093,0.80673409849337,1.77902435075896,3.04361001780095,10.9141684155238,6.25856027951241,6.78605063760728,3.18330355265841,2.72949721966768,5.39291645192533,10.8069024937347,11.3510525754989,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.436725127492355,0.674321731924103,0.41326727862668,1.04702376793612,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr14:56376667..56376693,+ | |short_description=p@chr14:56376667..56376693,+ | ||
}} | }} |
Revision as of 14:42, 13 November 2012
Short description: | p@chr14:56376667..56376693, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:56376667..56376693, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.29e-18 | 6 |
gut absorptive cell | 3.29e-18 | 6 |
enterocyte | 3.29e-18 | 6 |
intestinal epithelial cell | 1.16e-15 | 9 |
epithelial cell of alimentary canal | 1.16e-15 | 9 |
columnar/cuboidal epithelial cell | 1.63e-15 | 7 |
epithelial cell | 2.65e-10 | 25 |
M cell of gut | 9.94e-10 | 3 |
endo-epithelial cell | 5.24e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-50 | 31 |
gastrointestinal system | 1.82e-34 | 47 |
mucosa | 5.38e-31 | 15 |
intestinal mucosa | 9.41e-26 | 13 |
wall of intestine | 9.41e-26 | 13 |
gastrointestinal system mucosa | 9.41e-26 | 13 |
organ component layer | 2.35e-18 | 24 |
epithelium of mucosa | 1.16e-15 | 9 |
gastrointestinal system epithelium | 1.16e-15 | 9 |
intestinal epithelium | 1.16e-15 | 9 |
digestive system | 2.02e-13 | 116 |
digestive tract | 2.02e-13 | 116 |
primitive gut | 2.02e-13 | 116 |
endoderm-derived structure | 4.21e-13 | 118 |
endoderm | 4.21e-13 | 118 |
presumptive endoderm | 4.21e-13 | 118 |
simple columnar epithelium | 1.22e-12 | 11 |
small intestine | 2.32e-11 | 4 |
subdivision of digestive tract | 3.17e-11 | 114 |
ileal mucosa | 7.16e-09 | 3 |
ileum | 7.16e-09 | 3 |
mucosa of small intestine | 7.16e-09 | 3 |
wall of small intestine | 7.16e-09 | 3 |
gut-associated lymphoid tissue | 7.94e-07 | 2 |
mucosa-associated lymphoid tissue | 7.94e-07 | 2 |
lymphoid tissue | 7.94e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.