FFCP PHASE1:Mm9::chr6:63206353..63206375,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr6:63206353..63206375,+ | |id=chr6:63206353..63206375,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.39e-14!33;CL:0000047!3.39e-14!33;CL:0000031!3.39e-14!33;CL:0000404!3.39e-14!33;CL:0000117!9.95e-11!23;CL:0000337!9.95e-11!23;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39;CL:0000221!6.28e-10!44;CL:0000133!6.28e-10!44;CL:0002319!1.66e-09!43;CL:0000055!5.07e-07!50 | |ontology_enrichment_celltype=CL:0000540!3.39e-14!33;CL:0000047!3.39e-14!33;CL:0000031!3.39e-14!33;CL:0000404!3.39e-14!33;CL:0000117!9.95e-11!23;CL:0000337!9.95e-11!23;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39;CL:0000221!6.28e-10!44;CL:0000133!6.28e-10!44;CL:0002319!1.66e-09!43;CL:0000055!5.07e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.96e-27,23;CL:0000337,4.96e-27,23;CL:0000540,1.22e-20,33;CL:0000047,1.22e-20,33;CL:0000031,1.22e-20,33;CL:0000404,1.22e-20,33;CL:0000393,6.09e-17,39;CL:0000211,6.09e-17,39;CL:0002319,4.75e-15,43;CL:0000221,1.25e-14,44;CL:0000133,1.25e-14,44;CL:0002612,1.83e-10,3;CL:0002614,2.80e-10,3;CL:0000120,1.81e-09,3;CL:0002321,5.96e-08,70;CL:0002611,8.88e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.24e-17!73;UBERON:0005743!2.24e-17!73;UBERON:0000073!3.23e-17!75;UBERON:0001016!3.23e-17!75;UBERON:0004121!1.39e-14!102;UBERON:0000924!1.39e-14!102;UBERON:0006601!1.39e-14!102;UBERON:0002346!1.54e-12!71;UBERON:0003075!1.54e-12!71;UBERON:0007284!1.54e-12!71;UBERON:0001049!1.54e-11!52;UBERON:0005068!1.54e-11!52;UBERON:0006241!1.54e-11!52;UBERON:0007135!1.54e-11!52;UBERON:0000033!1.55e-11!63;UBERON:0000955!6.50e-09!50;UBERON:0006238!6.50e-09!50;UBERON:0003076!7.65e-09!12;UBERON:0003057!7.65e-09!12;UBERON:0002420!1.22e-08!8;UBERON:0007245!1.22e-08!8;UBERON:0010009!1.22e-08!8;UBERON:0010011!1.22e-08!8;UBERON:0000454!1.22e-08!8;UBERON:0002616!2.25e-08!49;UBERON:0002020!5.21e-08!34;UBERON:0003056!1.21e-07!49;UBERON:0002298!2.73e-07!6;UBERON:0002240!3.23e-07!6;UBERON:0005174!3.23e-07!6;UBERON:0001137!3.23e-07!6;UBERON:0000153!5.55e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!2.24e-17!73;UBERON:0005743!2.24e-17!73;UBERON:0000073!3.23e-17!75;UBERON:0001016!3.23e-17!75;UBERON:0004121!1.39e-14!102;UBERON:0000924!1.39e-14!102;UBERON:0006601!1.39e-14!102;UBERON:0002346!1.54e-12!71;UBERON:0003075!1.54e-12!71;UBERON:0007284!1.54e-12!71;UBERON:0001049!1.54e-11!52;UBERON:0005068!1.54e-11!52;UBERON:0006241!1.54e-11!52;UBERON:0007135!1.54e-11!52;UBERON:0000033!1.55e-11!63;UBERON:0000955!6.50e-09!50;UBERON:0006238!6.50e-09!50;UBERON:0003076!7.65e-09!12;UBERON:0003057!7.65e-09!12;UBERON:0002420!1.22e-08!8;UBERON:0007245!1.22e-08!8;UBERON:0010009!1.22e-08!8;UBERON:0010011!1.22e-08!8;UBERON:0000454!1.22e-08!8;UBERON:0002616!2.25e-08!49;UBERON:0002020!5.21e-08!34;UBERON:0003056!1.21e-07!49;UBERON:0002298!2.73e-07!6;UBERON:0002240!3.23e-07!6;UBERON:0005174!3.23e-07!6;UBERON:0001137!3.23e-07!6;UBERON:0000153!5.55e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-28,73;UBERON:0001016,5.18e-27,75;UBERON:0000073,1.37e-25,54;UBERON:0003076,1.38e-24,12;UBERON:0003057,1.38e-24,12;UBERON:0001049,3.63e-24,52;UBERON:0005068,3.63e-24,52;UBERON:0006241,3.63e-24,52;UBERON:0007135,3.63e-24,52;UBERON:0004121,3.04e-20,95;UBERON:0000924,3.04e-20,95;UBERON:0006601,3.04e-20,95;UBERON:0002346,8.72e-19,64;UBERON:0003075,8.72e-19,64;UBERON:0007284,8.72e-19,64;UBERON:0002240,6.31e-18,6;UBERON:0005174,6.31e-18,6;UBERON:0001137,6.31e-18,6;UBERON:0010371,9.68e-18,73;UBERON:0002020,4.03e-17,34;UBERON:0001948,1.33e-15,5;UBERON:0002315,1.33e-15,5;UBERON:0002616,9.73e-14,46;UBERON:0002420,1.70e-13,8;UBERON:0007245,1.70e-13,8;UBERON:0010009,1.70e-13,8;UBERON:0010011,1.70e-13,8;UBERON:0000454,1.70e-13,8;UBERON:0000955,2.25e-13,47;UBERON:0006238,2.25e-13,47;UBERON:0010314,4.22e-13,92;UBERON:0002950,1.56e-12,4;UBERON:0001891,1.56e-12,4;UBERON:0009616,1.56e-12,4;UBERON:0010286,1.56e-12,4;UBERON:0002257,1.83e-10,3;UBERON:0002038,2.80e-10,3;UBERON:0009663,2.80e-10,3;UBERON:0009661,2.80e-10,3;UBERON:0000125,2.80e-10,3;UBERON:0002308,2.80e-10,3;UBERON:0004733,5.48e-09,6;UBERON:0004732,5.48e-09,6;UBERON:0002028,5.48e-09,6;UBERON:0007277,5.48e-09,6;UBERON:0004111,1.03e-08,122;UBERON:0003528,1.31e-08,29;UBERON:0002791,1.31e-08,29;UBERON:0001893,1.31e-08,29;UBERON:0000025,1.52e-08,114;UBERON:0003080,1.94e-08,40;UBERON:0002780,2.55e-07,39;UBERON:0001890,2.55e-07,39;UBERON:0006240,2.55e-07,39;UBERON:0001896,3.15e-07,2;UBERON:0002298,3.15e-07,2;UBERON:0005290,3.15e-07,2;UBERON:0010096,3.15e-07,2;UBERON:0011216,3.51e-07,194;UBERON:0002256,8.88e-07,2 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.32521124570968,0,0.191690942036473,0,0,1.14918604276669,1.84327839907492,1.18697658957174,0.823388792421687,2.08365348222704,2.79182999001381,2.8138130501584,1.37518422999129,2.06240009831567,2.84743361598206,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,27.5213949190854,21.154117388159,0,0,0,0,1.04853447583376,1.37250180845588,0.502617408451458,0.521472960576829,1.79000820131231,1.87009240103604,0.486723789203273,0,0,0,0,0,0.229902104433473,0.180062129805349,0.452114453507145,0.272145996605311,0.512454881139399,0.187403449119458,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.540186184383045,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,2.72936002979246,1.64096361229084,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.955875191810208,0.222798674082394,0.849229592366497,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,1.11255181206306,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,1.84130094602871,1.14579102687879,1.20297227640581,0,0,0,1.35096360967266,0.906284817968409,0,0,0.798049746802062,0.341467211508268,0.729320151204882,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.402048282689293,0.476293691283074,0.579421629724277,0,0.412085900803307,0.735994600671987,0,0,0,0.581385666529314,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843 | |phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.32521124570968,0,0.191690942036473,0,0,1.14918604276669,1.84327839907492,1.18697658957174,0.823388792421687,2.08365348222704,2.79182999001381,2.8138130501584,1.37518422999129,2.06240009831567,2.84743361598206,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,27.5213949190854,21.154117388159,0,0,0,0,1.04853447583376,1.37250180845588,0.502617408451458,0.521472960576829,1.79000820131231,1.87009240103604,0.486723789203273,0,0,0,0,0,0.229902104433473,0.180062129805349,0.452114453507145,0.272145996605311,0.512454881139399,0.187403449119458,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.540186184383045,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,2.72936002979246,1.64096361229084,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.955875191810208,0.222798674082394,0.849229592366497,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,1.11255181206306,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,1.84130094602871,1.14579102687879,1.20297227640581,0,0,0,1.35096360967266,0.906284817968409,0,0,0.798049746802062,0.341467211508268,0.729320151204882,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.402048282689293,0.476293691283074,0.579421629724277,0,0.412085900803307,0.735994600671987,0,0,0,0.581385666529314,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843 | ||
|short_description=p4@Grid2 | |short_description=p4@Grid2 | ||
}} | }} |
Revision as of 12:53, 13 November 2012
Short description: | p4@Grid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Grid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 164bp_to_ENSMUST00000160408_5end |
EntrezGene: | Grid2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.96e-27 | 23 |
neuroblast (sensu Vertebrata) | 4.96e-27 | 23 |
neuron | 1.22e-20 | 33 |
neuronal stem cell | 1.22e-20 | 33 |
neuroblast | 1.22e-20 | 33 |
electrically signaling cell | 1.22e-20 | 33 |
electrically responsive cell | 6.09e-17 | 39 |
electrically active cell | 6.09e-17 | 39 |
neural cell | 4.75e-15 | 43 |
ectodermal cell | 1.25e-14 | 44 |
neurectodermal cell | 1.25e-14 | 44 |
neuron of the ventral spinal cord | 1.83e-10 | 3 |
neuron of the substantia nigra | 2.80e-10 | 3 |
granule cell | 1.81e-09 | 3 |
embryonic cell | 5.96e-08 | 70 |
neuron of the dorsal spinal cord | 8.88e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.