FFCP PHASE1:Mm9::chr1:138126959..138126971,-: Difference between revisions
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|id=chr1:138126959..138126971,- | |id=chr1:138126959..138126971,- | ||
|ontology_enrichment_celltype=CL:0002563!2.52e-07!9;CL:0002251!2.52e-07!9;CL:0002076!5.98e-07!15 | |ontology_enrichment_celltype=CL:0002563!2.52e-07!9;CL:0002251!2.52e-07!9;CL:0002076!5.98e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.03e-16,9;CL:0002251,5.03e-16,9;CL:0002076,2.09e-14,15;CL:0000066,1.92e-13,25;CL:0000223,2.83e-10,20;CL:0000239,8.61e-10,6;CL:0000677,8.61e-10,6;CL:0000584,8.61e-10,6;CL:0000075,2.46e-08,7;CL:0002250,5.63e-08,3;CL:0000682,1.79e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.49e-21!59;UBERON:0000160!4.83e-19!43;UBERON:0000344!5.66e-12!15;UBERON:0001242!1.48e-10!13;UBERON:0000060!1.48e-10!13;UBERON:0001262!1.48e-10!13;UBERON:0004786!1.48e-10!13;UBERON:0004119!1.62e-10!130;UBERON:0000925!1.62e-10!130;UBERON:0006595!1.62e-10!130;UBERON:0001007!1.90e-10!128;UBERON:0001555!1.90e-10!128;UBERON:0007026!1.90e-10!128;UBERON:0004921!1.67e-09!126;UBERON:0004185!1.67e-09!126;UBERON:0004923!1.31e-07!24;UBERON:0003350!2.52e-07!9;UBERON:0004808!2.52e-07!9;UBERON:0001277!2.52e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!3.49e-21!59;UBERON:0000160!4.83e-19!43;UBERON:0000344!5.66e-12!15;UBERON:0001242!1.48e-10!13;UBERON:0000060!1.48e-10!13;UBERON:0001262!1.48e-10!13;UBERON:0004786!1.48e-10!13;UBERON:0004119!1.62e-10!130;UBERON:0000925!1.62e-10!130;UBERON:0006595!1.62e-10!130;UBERON:0001007!1.90e-10!128;UBERON:0001555!1.90e-10!128;UBERON:0007026!1.90e-10!128;UBERON:0004921!1.67e-09!126;UBERON:0004185!1.67e-09!126;UBERON:0004923!1.31e-07!24;UBERON:0003350!2.52e-07!9;UBERON:0004808!2.52e-07!9;UBERON:0001277!2.52e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.67e-30,47;UBERON:0000160,2.88e-28,31;UBERON:0000344,6.65e-21,15;UBERON:0001242,8.93e-21,13;UBERON:0001262,8.93e-21,13;UBERON:0004786,8.93e-21,13;UBERON:0003350,5.03e-16,9;UBERON:0004808,5.03e-16,9;UBERON:0001277,5.03e-16,9;UBERON:0004923,1.90e-14,24;UBERON:0000485,7.59e-13,11;UBERON:0001007,1.35e-12,116;UBERON:0001555,1.35e-12,116;UBERON:0007026,1.35e-12,116;UBERON:0004119,2.90e-12,118;UBERON:0000925,2.90e-12,118;UBERON:0006595,2.90e-12,118;UBERON:0004921,7.20e-12,114;UBERON:0002108,2.23e-10,4;UBERON:0000331,2.49e-08,3;UBERON:0002116,2.49e-08,3;UBERON:0001204,2.49e-08,3;UBERON:0001168,2.49e-08,3 | |||
|phase1_expression=0,1.04692622291808,1.81999695755814,1.81478526784098,0,3.18970616632591,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,1.37645568640302,1.14846392823004,3.01533397311352,1.72376986148711,3.04037471130198,2.52030129759931,2.43903561720835,0,0,0,2.3108129580102,1.99481574430191,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,2.16491041011214,3.04031838570118,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,4.6967043869531,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0.213288250535234,0,1.28867461322093,1.00841762311671,0.889512175379481,1.71203063501303,0.949058123089023,0.988193728344065,1.50801125280162,1.59165177632921,1.36474860983384,0,1.29682829924817,1.59313018603494,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.69560190836683,0.295220295959204,1.41298855057237,0.616985819609003,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.98931751764888,0.161464426695906,0.301564624640779,0.477489376012546,0.656563598980245,2.04036585640896,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.813277868507395,0.972048067396211,0.836353184057875,1.9652630737156,1.07891477107857,1.23980183588004,2.09404753587224,3.88844919875379,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,2.56412273974171,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0,0,0.187283014939765,0.320125762024346,0.17230640686684,0,0,0,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.81999695755814,1.81478526784098,0,3.18970616632591,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,1.37645568640302,1.14846392823004,3.01533397311352,1.72376986148711,3.04037471130198,2.52030129759931,2.43903561720835,0,0,0,2.3108129580102,1.99481574430191,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,2.16491041011214,3.04031838570118,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,4.6967043869531,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0.213288250535234,0,1.28867461322093,1.00841762311671,0.889512175379481,1.71203063501303,0.949058123089023,0.988193728344065,1.50801125280162,1.59165177632921,1.36474860983384,0,1.29682829924817,1.59313018603494,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.69560190836683,0.295220295959204,1.41298855057237,0.616985819609003,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.98931751764888,0.161464426695906,0.301564624640779,0.477489376012546,0.656563598980245,2.04036585640896,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.813277868507395,0.972048067396211,0.836353184057875,1.9652630737156,1.07891477107857,1.23980183588004,2.09404753587224,3.88844919875379,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,2.56412273974171,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0,0,0.187283014939765,0.320125762024346,0.17230640686684,0,0,0,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0,0,0,0 | ||
|short_description=p6@5730559C18Rik | |short_description=p6@5730559C18Rik | ||
}} | }} |
Revision as of 12:47, 13 November 2012
Short description: | p6@5730559C18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_5730559C18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3232 |
Association with transcript: | -72bp_to_ENSMUST00000144464_5end |
EntrezGene: | 5730559C18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.03e-16 | 9 |
epithelial cell of alimentary canal | 5.03e-16 | 9 |
endo-epithelial cell | 2.09e-14 | 15 |
epithelial cell | 1.92e-13 | 25 |
endodermal cell | 2.83e-10 | 20 |
brush border epithelial cell | 8.61e-10 | 6 |
gut absorptive cell | 8.61e-10 | 6 |
enterocyte | 8.61e-10 | 6 |
columnar/cuboidal epithelial cell | 2.46e-08 | 7 |
intestinal crypt stem cell | 5.63e-08 | 3 |
M cell of gut | 1.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.67e-30 | 47 |
intestine | 2.88e-28 | 31 |
mucosa | 6.65e-21 | 15 |
intestinal mucosa | 8.93e-21 | 13 |
wall of intestine | 8.93e-21 | 13 |
gastrointestinal system mucosa | 8.93e-21 | 13 |
epithelium of mucosa | 5.03e-16 | 9 |
gastrointestinal system epithelium | 5.03e-16 | 9 |
intestinal epithelium | 5.03e-16 | 9 |
organ component layer | 1.90e-14 | 24 |
simple columnar epithelium | 7.59e-13 | 11 |
digestive system | 1.35e-12 | 116 |
digestive tract | 1.35e-12 | 116 |
primitive gut | 1.35e-12 | 116 |
endoderm-derived structure | 2.90e-12 | 118 |
endoderm | 2.90e-12 | 118 |
presumptive endoderm | 2.90e-12 | 118 |
subdivision of digestive tract | 7.20e-12 | 114 |
small intestine | 2.23e-10 | 4 |
ileal mucosa | 2.49e-08 | 3 |
ileum | 2.49e-08 | 3 |
mucosa of small intestine | 2.49e-08 | 3 |
wall of small intestine | 2.49e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.