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Revision as of 17:18, 15 June 2012

Name:gland of diencephalon
Definition:"A gland that is part of a diencephalon [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA:4475
EHDAA2:0000395
EMAPA:16646
EMAPA:16897

VHOG:0000653
Synonyms: "between brain gland" EXACT [OBOL:automatic]
"diencephalon gland" EXACT [OBOL:automatic]
"gland of between brain" EXACT [OBOL:automatic]
"gland of interbrain" EXACT [OBOL:automatic]
"gland of mature diencephalon" EXACT [OBOL:automatic]
"interbrain gland" EXACT [OBOL:automatic]
"mature diencephalon gland" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002530(gland),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0001894(diencephalon)



Children

is a:UBERON:0000007 (pituitary gland),UBERON:0001905 (pineal body)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003296 (gland of diencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.57e-195FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
2.57e-195FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
1.0e-156FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.0e-156FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.5e-156FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262cep@chr12:128210626..128210641, -
1.5e-156FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262cep@chr12:128210626..128210641, -
6.94e-147FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979677..7979703, +
6.94e-147FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979677..7979703, +
6.94e-147FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
6.94e-147FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
2.79e-131FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
2.79e-131FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
1.07e-130FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.07e-130FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.0e-112FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.0e-112FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.76e-111FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
1.76e-111FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
8.91e-111FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
8.91e-111FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
2.76e-110FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
2.76e-110FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
2.76e-110FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
5.02e-99FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
5.02e-99FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
1.38e-98FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.38e-98FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.55e-98FFCP PHASE2:Hg19::chr16:18066399..18066411,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:18066399..18066411, -
1.55e-98FFCP PHASE2:Hg19::chr12:89881337..89881342,-#_86c8842de92bb34e78ab840208c7dc62p@chr12:89881337..89881342, -
1.55e-98FFCP PHASE1:Hg19::chr17:61996252..61996253,-#_86c8842de92bb34e78ab840208c7dc62p2@GH1, p3@CSHL1
1.55e-98FFCP PHASE1:Hg19::chr6:22287710..22287718,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287710..22287718, -
1.55e-98FFCP PHASE1:Hg19::chr16:50898038..50898042,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:50898038..50898042, -
1.55e-98FFCP PHASE2:Hg19::chr11:18053180..18053192,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18053180..18053192, -
1.55e-98FFCP PHASE1:Hg19::chr5:134871183..134871197,-#_86c8842de92bb34e78ab840208c7dc62p3@NEUROG1
1.55e-98FFCP PHASE2:Hg19::chr7:9202487..9202498,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:9202487..9202498, -
1.55e-98FFCP PHASE1:Hg19::chr2:44903714..44903719,+#_86c8842de92bb34e78ab840208c7dc62p8@CAMKMT
1.55e-98FFCP PHASE2:Hg19::chr5:7338484..7338504,-#_86c8842de92bb34e78ab840208c7dc62p@chr5:7338484..7338504, -
1.55e-98FFCP PHASE1:Hg19::chr7:9178350..9178369,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:9178350..9178369, -
1.55e-98FFCP PHASE2:Hg19::chr3:54952462..54952471,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:54952462..54952471, -
1.55e-98FFCP PHASE2:Hg19::chr2:17185712..17185735,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17185712..17185735, +
1.55e-98FFCP PHASE2:Hg19::chr8:135473472..135473477,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135473472..135473477, -
1.55e-98FFCP PHASE1:Hg19::chr13:56628524..56628547,-#_86c8842de92bb34e78ab840208c7dc62p@chr13:56628524..56628547, -
1.55e-98FFCP PHASE1:Hg19::chr3:100942645..100942655,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:100942645..100942655, -
1.55e-98FFCP PHASE2:Hg19::chr17:61996018..61996019,-#_86c8842de92bb34e78ab840208c7dc62p5@AB591020
1.55e-98FFCP PHASE2:Hg19::chr14:49512240..49512248,-#_86c8842de92bb34e78ab840208c7dc62p@chr14:49512240..49512248, -
1.55e-98FFCP PHASE1:Hg19::chr5:119867229..119867240,+#_86c8842de92bb34e78ab840208c7dc62p9@PRR16
1.55e-98FFCP PHASE1:Hg19::chr1:99860753..99860764,-#_86c8842de92bb34e78ab840208c7dc62p@chr1:99860753..99860764, -
1.55e-98FFCP PHASE1:Hg19::chr8:135504314..135504320,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135504314..135504320, -
1.55e-98FFCP PHASE1:Hg19::chr7:31006831..31006834,+#_86c8842de92bb34e78ab840208c7dc62p@chr7:31006831..31006834, +
1.55e-98FFCP PHASE1:Hg19::chr11:18041199..18041200,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18041199..18041200, -
1.55e-98FFCP PHASE2:Hg19::chr7:9178350..9178369,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:9178350..9178369, -
1.55e-98FFCP PHASE2:Hg19::chr4:68620100..68620112,-#_86c8842de92bb34e78ab840208c7dc62p1@GNRHR
1.55e-98FFCP PHASE2:Hg19::chr11:18067904..18067908,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18067904..18067908, -
1.55e-98FFCP PHASE1:Hg19::chr3:87325636..87325643,-#_86c8842de92bb34e78ab840208c7dc62p2@POU1F1
1.55e-98FFCP PHASE2:Hg19::chr17:61995371..61995384,+#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995371..61995384, +
1.55e-98FFCP PHASE1:Hg19::chr8:130017368..130017390,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:130017368..130017390, +
1.55e-98FFCP PHASE1:Hg19::chr16:51808960..51808964,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:51808960..51808964, -
1.55e-98FFCP PHASE2:Hg19::chr5:119867229..119867240,+#_86c8842de92bb34e78ab840208c7dc62p9@PRR16
1.55e-98FFCP PHASE2:Hg19::chr8:135504314..135504320,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135504314..135504320, -
1.55e-98FFCP PHASE2:Hg19::chr7:31006831..31006834,+#_86c8842de92bb34e78ab840208c7dc62p@chr7:31006831..31006834, +
1.55e-98FFCP PHASE1:Hg19::chr12:49621641..49621650,+#_86c8842de92bb34e78ab840208c7dc62p22@TUBA1C
1.55e-98FFCP PHASE1:Hg19::chr9:75733141..75733143,+#_86c8842de92bb34e78ab840208c7dc62p@chr9:75733141..75733143, +
1.55e-98FFCP PHASE1:Hg19::chr8:135473983..135473986,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135473983..135473986, -
1.55e-98FFCP PHASE2:Hg19::chr6:22287710..22287718,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287710..22287718, -
1.55e-98FFCP PHASE2:Hg19::chr16:17930871..17930877,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:17930871..17930877, -
1.55e-98FFCP PHASE2:Hg19::chr5:134871183..134871197,-#_86c8842de92bb34e78ab840208c7dc62p3@NEUROG1
1.55e-98FFCP PHASE2:Hg19::chr3:139938385..139938390,+#_86c8842de92bb34e78ab840208c7dc62p@chr3:139938385..139938390, +
1.55e-98FFCP PHASE1:Hg19::chr18:56962131..56962138,-#_86c8842de92bb34e78ab840208c7dc62p@chr18:56962131..56962138, -
1.55e-98FFCP PHASE1:Hg19::chr17:61995704..61995739,+#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995704..61995739, +
1.55e-98FFCP PHASE1:Hg19::chr1:204667243..204667248,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:204667243..204667248, +
1.55e-98FFCP PHASE2:Hg19::chr13:56628548..56628553,-#_86c8842de92bb34e78ab840208c7dc62p@chr13:56628548..56628553, -
1.55e-98FFCP PHASE2:Hg19::chr8:130017368..130017390,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:130017368..130017390, +
1.55e-98FFCP PHASE1:Hg19::chr11:18063707..18063720,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18063707..18063720, -
1.55e-98FFCP PHASE1:Hg19::chr5:136699666..136699696,-#_86c8842de92bb34e78ab840208c7dc62p@chr5:136699666..136699696, -
1.55e-98FFCP PHASE1:Hg19::chr2:48705144..48705150,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:48705144..48705150, +
1.55e-98FFCP PHASE1:Hg19::chr7:9228468..9228494,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:9228468..9228494, -
1.55e-98FFCP PHASE2:Hg19::chr9:75733141..75733143,+#_86c8842de92bb34e78ab840208c7dc62p@chr9:75733141..75733143, +
1.55e-98FFCP PHASE2:Hg19::chr8:135473983..135473986,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135473983..135473986, -
1.55e-98FFCP PHASE1:Hg19::chr11:72297717..72297725,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:72297717..72297725, -
1.55e-98FFCP PHASE2:Hg19::chr20:58401898..58401905,+#_86c8842de92bb34e78ab840208c7dc62p@chr20:58401898..58401905, +
1.55e-98FFCP PHASE1:Hg19::chr17:61994760..61994767,+#_86c8842de92bb34e78ab840208c7dc62p@chr17:61994760..61994767, +
1.55e-98FFCP PHASE2:Hg19::chr1:154540028..154540037,+#_86c8842de92bb34e78ab840208c7dc62p4@CHRNB2
1.55e-98FFCP PHASE2:Hg19::chr5:136699666..136699696,-#_86c8842de92bb34e78ab840208c7dc62p@chr5:136699666..136699696, -
1.55e-98FFCP PHASE2:Hg19::chr4:20985967..20985972,-#_86c8842de92bb34e78ab840208c7dc62p28@KCNIP4
1.55e-98FFCP PHASE1:Hg19::chr6:22287787..22287798,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287787..22287798, -
1.55e-98FFCP PHASE2:Hg19::chr8:99033417..99033423,+#_86c8842de92bb34e78ab840208c7dc62p17@MATN2
1.55e-98FFCP PHASE2:Hg19::chr7:9228468..9228494,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:9228468..9228494, -
1.55e-98FFCP PHASE2:Hg19::chr19:49547457..49547458,+#_86c8842de92bb34e78ab840208c7dc62p2@CGB5
1.55e-98FFCP PHASE2:Hg19::chr17:18021982..18021985,+#_86c8842de92bb34e78ab840208c7dc62p3@MYO15A
1.55e-98FFCP PHASE2:Hg19::chr17:61996393..61996421,-#_86c8842de92bb34e78ab840208c7dc62p4@CSHL1, p4@GH1
1.55e-98FFCP PHASE1:Hg19::chr8:107844170..107844179,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:107844170..107844179, +
1.55e-98FFCP PHASE2:Hg19::chr12:55422565..55422604,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:55422565..55422604, +
1.55e-98FFCP PHASE1:Hg19::chr4:1352813..1352818,-#_86c8842de92bb34e78ab840208c7dc62p@chr4:1352813..1352818, -

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