FFCP PHASE2:Hg19::chr5:63986233..63986261,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:100132916 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:34236 |TS...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=100132916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=34236 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=D6RH14 | ||
|association_with_transcript=-7bp_to_ENST00000509189_5end | |association_with_transcript=-7bp_to_ENST00000509189_5end | ||
|cluster_id=chr5:63986233..63986261,+ | |cluster_id=chr5:63986233..63986261,+ |
Latest revision as of 09:57, 18 September 2015
Short description: | p2@FAM159B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM159B_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -7bp_to_ENST00000509189_5end |
EntrezGene: | FAM159B |
HGNC: | 34236 |
UniProt: | D6RH14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@FAM159B |
---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.99e-41 | 2 |
keratinocyte | 4.64e-17 | 5 |
embryonic stem cell | 1.21e-16 | 5 |
stratified squamous epithelial cell | 2.18e-14 | 6 |
keratin accumulating cell | 2.18e-14 | 6 |
stratified epithelial cell | 2.18e-14 | 6 |
keratinizing barrier epithelial cell | 2.18e-14 | 6 |
epithelial fate stem cell | 2.18e-14 | 6 |
stratified epithelial stem cell | 2.18e-14 | 6 |
surface ectodermal cell | 2.18e-14 | 6 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
duodenum | 6.34e-08 | 2 |
medulla oblongata | 6.78e-08 | 3 |
myelencephalon | 6.78e-08 | 3 |
future myelencephalon | 6.78e-08 | 3 |
Showing 1 to 4 of 4 entries