FFCP PHASE1:Hg19::chr7:130126107..130126120,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=4232 | |EntrezGene=entrezgene:4232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7028 | |HGNC=HGNC:7028 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=C9JSW2 | |UniProt=uniprot:C9JSW2 | ||
|association_with_transcript=-56bp_to_ENST00000427521_5end | |association_with_transcript=-56bp_to_ENST00000427521_5end | ||
|cluster_id=chr7:130126107..130126120,+ | |||
|coexpression_cluster_id=C4651 | |coexpression_cluster_id=C4651 | ||
|description=CAGE_peak_4_at_MEST_5end | |description=CAGE_peak_4_at_MEST_5end | ||
Revision as of 05:59, 31 July 2015
| Short description: | p4@MEST |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_MEST_5end |
| Coexpression cluster: | C4651_argyrophil_colon_Prostate_Intestinal_acute_epidermoid_HES3GFP |
| Association with transcript: | -56bp_to_ENST00000427521_5end |
| EntrezGene: | 4232 |
| HGNC: | 7028 |
| UniProt: | C9JSW2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@MEST |
|---|
0
5
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.83e-10 | 253 |
| embryonic stem cell | 1.61e-07 | 5 |
| germ line cell | 2.37e-07 | 7 |
| germ cell | 2.37e-07 | 7 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 2.83e-22 | 106 |
| cancer | 9.38e-21 | 235 |
| disease of cellular proliferation | 8.40e-20 | 239 |
| cell type cancer | 8.59e-16 | 143 |
| organ system cancer | 6.41e-11 | 137 |
| myeloid leukemia | 1.14e-09 | 31 |
| leukemia | 8.39e-08 | 39 |
Showing 1 to 7 of 7 entries
