FFCP PHASE1:Mm9::chrX:71126170..71126179,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16728|HGNC=|MCL_coexpression_id=13|UniProt=Q6PGJ3,F7CG04,E9Q597|association_with_transcript=0bp_to_ENSMUST00000102871,ENSMUST00000114417,ENSMUST00000114433,NM_008478,uc009tmv.1,uc009tmw.1_5end|description=CAGE_peak_2_at_L1cam_5end|id=chrX:71126170..71126179,-|ontology_enrichment_celltype=CL:0000540!7.93e-20!33;CL:0000047!7.93e-20!33;CL:0000031!7.93e-20!33;CL:0000404!7.93e-20!33;CL:0000117!1.41e-15!23;CL:0000337!1.41e-15!23;CL:0000393!3.28e-14!39;CL:0000211!3.28e-14!39;CL:0002319!1.42e-13!43;CL:0000221!2.16e-13!44;CL:0000133!2.16e-13!44;CL:0000055!2.04e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.42e-32,33;CL:0000047,3.42e-32,33;CL:0000031,3.42e-32,33;CL:0000404,3.42e-32,33;CL:0000117,1.37e-25,23;CL:0000337,1.37e-25,23;CL:0000393,1.92e-25,39;CL:0000211,1.92e-25,39;CL:0002319,1.34e-23,43;CL:0000221,8.48e-23,44;CL:0000133,8.48e-23,44;CL:0002321,5.06e-12,70;CL:0000107,7.54e-09,9;CL:0002609,3.79e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.26e-22!75;UBERON:0001016!1.26e-22!75;UBERON:0001017!6.61e-22!73;UBERON:0005743!6.61e-22!73;UBERON:0004121!6.76e-22!102;UBERON:0000924!6.76e-22!102;UBERON:0006601!6.76e-22!102;UBERON:0002346!9.53e-17!71;UBERON:0003075!9.53e-17!71;UBERON:0007284!9.53e-17!71;UBERON:0001049!1.26e-15!52;UBERON:0005068!1.26e-15!52;UBERON:0006241!1.26e-15!52;UBERON:0007135!1.26e-15!52;UBERON:0002020!1.33e-15!34;UBERON:0002616!1.59e-13!49;UBERON:0000955!2.07e-13!50;UBERON:0006238!2.07e-13!50;UBERON:0000033!4.43e-13!63;UBERON:0002791!3.90e-12!29;UBERON:0003528!3.90e-12!29;UBERON:0001893!3.90e-12!29;UBERON:0003080!2.26e-11!40;UBERON:0002780!6.96e-11!39;UBERON:0001890!6.96e-11!39;UBERON:0006240!6.96e-11!39;UBERON:0003056!7.25e-11!49;UBERON:0000956!1.34e-07!21;UBERON:0001869!1.34e-07!21;UBERON:0000203!1.34e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.97e-38,75;UBERON:0001017,2.67e-38,73;UBERON:0000073,5.18e-30,54;UBERON:0001049,7.12e-28,52;UBERON:0005068,7.12e-28,52;UBERON:0006241,7.12e-28,52;UBERON:0007135,7.12e-28,52;UBERON:0002020,7.82e-28,34;UBERON:0004121,1.74e-26,95;UBERON:0000924,1.74e-26,95;UBERON:0006601,1.74e-26,95;UBERON:0002346,4.33e-24,64;UBERON:0003075,4.33e-24,64;UBERON:0007284,4.33e-24,64;UBERON:0003528,9.68e-22,29;UBERON:0002791,9.68e-22,29;UBERON:0001893,9.68e-22,29;UBERON:0002616,3.57e-21,46;UBERON:0000955,1.77e-20,47;UBERON:0006238,1.77e-20,47;UBERON:0010371,2.33e-19,73;UBERON:0003080,2.80e-19,40;UBERON:0002780,1.98e-18,39;UBERON:0001890,1.98e-18,39;UBERON:0006240,1.98e-18,39;UBERON:0003056,6.46e-14,49;UBERON:0000956,9.35e-14,21;UBERON:0001869,9.35e-14,21;UBERON:0000203,9.35e-14,21;UBERON:0010314,2.75e-13,92;UBERON:0002619,3.55e-10,17;UBERON:0002420,2.06e-09,8;UBERON:0007245,2.06e-09,8;UBERON:0010009,2.06e-09,8;UBERON:0010011,2.06e-09,8;UBERON:0000454,2.06e-09,8;UBERON:0011216,3.44e-09,194;UBERON:0003076,3.75e-09,12;UBERON:0003057,3.75e-09,12;UBERON:0002410,7.54e-09,9;UBERON:0000010,1.84e-08,11;UBERON:0002240,2.03e-08,6;UBERON:0005174,2.03e-08,6;UBERON:0001137,2.03e-08,6;UBERON:0002021,1.47e-07,10;UBERON:0000411,1.47e-07,10;UBERON:0001950,1.47e-07,10;UBERON:0001948,1.84e-07,5;UBERON:0002315,1.84e-07,5;UBERON:0000369,4.42e-07,5;UBERON:0002435,4.42e-07,5;UBERON:0000204,4.42e-07,5;UBERON:0010082,4.42e-07,5|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,2.01455126294268,2.80335168714631,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0.157731082679119,0.274228867211478,0,0.935476191661768,0,0,1.11994695955385,0.91763712426868,0.57423196411502,0.430761996159075,3.23206849028834,1.14014051673824,1.51218077855958,2.88249663851896,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0,0.588231488031014,2.04913645487534,0,0,0,0,0,0,0,0,0.139986421625363,0,0,1.45072428402269,0.336093799142464,0,0.286533439938757,0,3.43937983461316,4.23192783417626,5.70448263155561,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,3.42175720617976,3.37514845829227,4.20649922702764,5.99867067247988,5.07997644188711,3.06226998037385,3.1629005436018,3.67687514644008,3.30347642998166,5.10749352340751,3.37934373163736,6.06676923558892,6.22115976496386,4.68822033501084,2.23346399201105,3.37657566019008,2.59757021220577,9.1334861496837,4.55589378557129,5.40558392893372,0.757261933331841,2.26714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.913396434936424,1.15307748628029,0.753613202763113,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,4.68449275218475,2.93225389538837,1.02182822083437,0,0,0,2.99581278809645,3.20250421973039,4.52355667606312,2.60736480288415,0.767146371990992,5.194701113989,3.73154905055843,0.203678727700633,0.124406970610093,0,0.420883711772948,0.130120442962704,0.229902104433473,0.540186389416048,0.452114453507145,0.408218994907967,0.384341160854549,0.843315521037559,0.258703370739016,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,4.93942139420565,0.330418782983798,1.05780226665418,0,0.232236671860439,1.03093969057675,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0.432276099749388,0.796565093017469,0,0,1.1270773567308,0,0.387904974335251,0.841629838683823,1.07502113111237,1.18088118383682,0.31399745568275,0.863780147452604,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0,0,0.469380496577004,0.670025029767263,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.345369963731791,0.433947175744535,4.52373851817817,0.54390568381871,0,0.275936746304732,2.24770825982909,1.99259867206745,0,0.504941854408746,2.52406575533005,2.34263246577983,2.36965737506079,2.86762557543062,3.56477878531831,4.24614796183249,4.04810701674894,2.04579100537918,1.97643888973262,0.321321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.987294123612726,1.522324745573,0,0,0.661585194164886,0.8244312647074,0.322928853391811,0.361877549568935,0.596861720015682,0.492422699235184,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.674321731924103,0.247960367176008,0,1.8146096260851,0.621339313086926,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0.221985953374065,0.448569283047378,1.17519231454855,0.579568782096571,0.187682475451182,0,1.07184189539533,0,4.51801474093653,5.52390283808612,6.30185064783336,2.57779773515531,0,3.0215755895588,2.02506750069542,1.35096360967266,1.35942722695261,1.03552062350364,0.207574695168353,1.59609949360412,0.853668028770671,0.972426868273176,0,0.735374033800057,1.11123363900808,1.23621034343337,0.962757628775446,1.26348605881899,1.01391719956096,0.754505365544305,1.12369808963859,0.640251524048693,0.861532034334199,0.476293691283074,1.15884325944855,0.578727661391115,0.824171801606613,0.735994600671987,1.02860775715625,0.532427418478012,0.715308569841963,0.436039249896986,1.41164070622996,0.507687647350059,0.73171189149109,0.789209134313529,1.22223702461276,0.561142271657738,0.830445126869219,0.985044823755635,1.22769312950907,0.619747364743864,0.964533054905707,2.24829520144151,0.935726433781634,2.14871054048298,0.765153328275374,0.882365676478062,0.231867835620421|short_description=p2@L1cam}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16728 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6PGJ3,uniprot:F7CG04,uniprot:E9Q597 | |||
|association_with_transcript=0bp_to_ENSMUST00000102871,ENSMUST00000114417,ENSMUST00000114433,NM_008478,uc009tmv.1,uc009tmw.1_5end | |||
|cluster_id=chrX:71126170..71126179,- | |||
|description=CAGE_peak_2_at_L1cam_5end | |||
|id=chrX:71126170..71126179,- | |||
|ontology_enrichment_celltype=CL:0000540!7.93e-20!33;CL:0000047!7.93e-20!33;CL:0000031!7.93e-20!33;CL:0000404!7.93e-20!33;CL:0000117!1.41e-15!23;CL:0000337!1.41e-15!23;CL:0000393!3.28e-14!39;CL:0000211!3.28e-14!39;CL:0002319!1.42e-13!43;CL:0000221!2.16e-13!44;CL:0000133!2.16e-13!44;CL:0000055!2.04e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.42e-32,33;CL:0000047,3.42e-32,33;CL:0000031,3.42e-32,33;CL:0000404,3.42e-32,33;CL:0000117,1.37e-25,23;CL:0000337,1.37e-25,23;CL:0000393,1.92e-25,39;CL:0000211,1.92e-25,39;CL:0002319,1.34e-23,43;CL:0000221,8.48e-23,44;CL:0000133,8.48e-23,44;CL:0002321,5.06e-12,70;CL:0000107,7.54e-09,9;CL:0002609,3.79e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.26e-22!75;UBERON:0001016!1.26e-22!75;UBERON:0001017!6.61e-22!73;UBERON:0005743!6.61e-22!73;UBERON:0004121!6.76e-22!102;UBERON:0000924!6.76e-22!102;UBERON:0006601!6.76e-22!102;UBERON:0002346!9.53e-17!71;UBERON:0003075!9.53e-17!71;UBERON:0007284!9.53e-17!71;UBERON:0001049!1.26e-15!52;UBERON:0005068!1.26e-15!52;UBERON:0006241!1.26e-15!52;UBERON:0007135!1.26e-15!52;UBERON:0002020!1.33e-15!34;UBERON:0002616!1.59e-13!49;UBERON:0000955!2.07e-13!50;UBERON:0006238!2.07e-13!50;UBERON:0000033!4.43e-13!63;UBERON:0002791!3.90e-12!29;UBERON:0003528!3.90e-12!29;UBERON:0001893!3.90e-12!29;UBERON:0003080!2.26e-11!40;UBERON:0002780!6.96e-11!39;UBERON:0001890!6.96e-11!39;UBERON:0006240!6.96e-11!39;UBERON:0003056!7.25e-11!49;UBERON:0000956!1.34e-07!21;UBERON:0001869!1.34e-07!21;UBERON:0000203!1.34e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.97e-38,75;UBERON:0001017,2.67e-38,73;UBERON:0000073,5.18e-30,54;UBERON:0001049,7.12e-28,52;UBERON:0005068,7.12e-28,52;UBERON:0006241,7.12e-28,52;UBERON:0007135,7.12e-28,52;UBERON:0002020,7.82e-28,34;UBERON:0004121,1.74e-26,95;UBERON:0000924,1.74e-26,95;UBERON:0006601,1.74e-26,95;UBERON:0002346,4.33e-24,64;UBERON:0003075,4.33e-24,64;UBERON:0007284,4.33e-24,64;UBERON:0003528,9.68e-22,29;UBERON:0002791,9.68e-22,29;UBERON:0001893,9.68e-22,29;UBERON:0002616,3.57e-21,46;UBERON:0000955,1.77e-20,47;UBERON:0006238,1.77e-20,47;UBERON:0010371,2.33e-19,73;UBERON:0003080,2.80e-19,40;UBERON:0002780,1.98e-18,39;UBERON:0001890,1.98e-18,39;UBERON:0006240,1.98e-18,39;UBERON:0003056,6.46e-14,49;UBERON:0000956,9.35e-14,21;UBERON:0001869,9.35e-14,21;UBERON:0000203,9.35e-14,21;UBERON:0010314,2.75e-13,92;UBERON:0002619,3.55e-10,17;UBERON:0002420,2.06e-09,8;UBERON:0007245,2.06e-09,8;UBERON:0010009,2.06e-09,8;UBERON:0010011,2.06e-09,8;UBERON:0000454,2.06e-09,8;UBERON:0011216,3.44e-09,194;UBERON:0003076,3.75e-09,12;UBERON:0003057,3.75e-09,12;UBERON:0002410,7.54e-09,9;UBERON:0000010,1.84e-08,11;UBERON:0002240,2.03e-08,6;UBERON:0005174,2.03e-08,6;UBERON:0001137,2.03e-08,6;UBERON:0002021,1.47e-07,10;UBERON:0000411,1.47e-07,10;UBERON:0001950,1.47e-07,10;UBERON:0001948,1.84e-07,5;UBERON:0002315,1.84e-07,5;UBERON:0000369,4.42e-07,5;UBERON:0002435,4.42e-07,5;UBERON:0000204,4.42e-07,5;UBERON:0010082,4.42e-07,5 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,2.01455126294268,2.80335168714631,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0.157731082679119,0.274228867211478,0,0.935476191661768,0,0,1.11994695955385,0.91763712426868,0.57423196411502,0.430761996159075,3.23206849028834,1.14014051673824,1.51218077855958,2.88249663851896,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0,0.588231488031014,2.04913645487534,0,0,0,0,0,0,0,0,0.139986421625363,0,0,1.45072428402269,0.336093799142464,0,0.286533439938757,0,3.43937983461316,4.23192783417626,5.70448263155561,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,3.42175720617976,3.37514845829227,4.20649922702764,5.99867067247988,5.07997644188711,3.06226998037385,3.1629005436018,3.67687514644008,3.30347642998166,5.10749352340751,3.37934373163736,6.06676923558892,6.22115976496386,4.68822033501084,2.23346399201105,3.37657566019008,2.59757021220577,9.1334861496837,4.55589378557129,5.40558392893372,0.757261933331841,2.26714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.913396434936424,1.15307748628029,0.753613202763113,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,4.68449275218475,2.93225389538837,1.02182822083437,0,0,0,2.99581278809645,3.20250421973039,4.52355667606312,2.60736480288415,0.767146371990992,5.194701113989,3.73154905055843,0.203678727700633,0.124406970610093,0,0.420883711772948,0.130120442962704,0.229902104433473,0.540186389416048,0.452114453507145,0.408218994907967,0.384341160854549,0.843315521037559,0.258703370739016,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,4.93942139420565,0.330418782983798,1.05780226665418,0,0.232236671860439,1.03093969057675,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0.432276099749388,0.796565093017469,0,0,1.1270773567308,0,0.387904974335251,0.841629838683823,1.07502113111237,1.18088118383682,0.31399745568275,0.863780147452604,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0,0,0.469380496577004,0.670025029767263,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.345369963731791,0.433947175744535,4.52373851817817,0.54390568381871,0,0.275936746304732,2.24770825982909,1.99259867206745,0,0.504941854408746,2.52406575533005,2.34263246577983,2.36965737506079,2.86762557543062,3.56477878531831,4.24614796183249,4.04810701674894,2.04579100537918,1.97643888973262,0.321321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.987294123612726,1.522324745573,0,0,0.661585194164886,0.8244312647074,0.322928853391811,0.361877549568935,0.596861720015682,0.492422699235184,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.674321731924103,0.247960367176008,0,1.8146096260851,0.621339313086926,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0.221985953374065,0.448569283047378,1.17519231454855,0.579568782096571,0.187682475451182,0,1.07184189539533,0,4.51801474093653,5.52390283808612,6.30185064783336,2.57779773515531,0,3.0215755895588,2.02506750069542,1.35096360967266,1.35942722695261,1.03552062350364,0.207574695168353,1.59609949360412,0.853668028770671,0.972426868273176,0,0.735374033800057,1.11123363900808,1.23621034343337,0.962757628775446,1.26348605881899,1.01391719956096,0.754505365544305,1.12369808963859,0.640251524048693,0.861532034334199,0.476293691283074,1.15884325944855,0.578727661391115,0.824171801606613,0.735994600671987,1.02860775715625,0.532427418478012,0.715308569841963,0.436039249896986,1.41164070622996,0.507687647350059,0.73171189149109,0.789209134313529,1.22223702461276,0.561142271657738,0.830445126869219,0.985044823755635,1.22769312950907,0.619747364743864,0.964533054905707,2.24829520144151,0.935726433781634,2.14871054048298,0.765153328275374,0.882365676478062,0.231867835620421 | |||
|short_description=p2@L1cam | |||
}} |
Revision as of 10:22, 6 August 2015
Short description: | p2@L1cam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_L1cam_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000102871, ENSMUST00000114417, ENSMUST00000114433, NM_008478, uc009tmv.1, uc009tmw.1_5end |
EntrezGene: | 16728 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.42e-32 | 33 |
neuronal stem cell | 3.42e-32 | 33 |
neuroblast | 3.42e-32 | 33 |
electrically signaling cell | 3.42e-32 | 33 |
CNS neuron (sensu Vertebrata) | 1.37e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.37e-25 | 23 |
electrically responsive cell | 1.92e-25 | 39 |
electrically active cell | 1.92e-25 | 39 |
neural cell | 1.34e-23 | 43 |
ectodermal cell | 8.48e-23 | 44 |
neurectodermal cell | 8.48e-23 | 44 |
embryonic cell | 5.06e-12 | 70 |
autonomic neuron | 7.54e-09 | 9 |
neuron of cerebral cortex | 3.79e-07 | 6 |