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FFCP PHASE1:Mm9::chrX:19941681..19941742,+: Difference between revisions

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{{FFCP|EntrezGene=19889|HGNC=|MCL_coexpression_id=163|UniProt=Q9EPK2,B1B076,B1B077|association_with_transcript=0bp_to_ENSMUST00000067979,ENSMUST00000115387,ENSMUST00000134349,ENSMUST00000169495,NM_133669,uc009ssv.1,uc009ssw.1,uc009ssx.1,uc012hfe.1_5end|description=CAGE_peak_1_at_Rp2h_5end|id=chrX:19941681..19941742,+|ontology_enrichment_celltype=CL:0002076!5.51e-07!15|ontology_enrichment_celltype_v019_2=CL:0002076,5.51e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!4.34e-12!128;UBERON:0001555!4.34e-12!128;UBERON:0007026!4.34e-12!128;UBERON:0005409!4.82e-12!59;UBERON:0004119!6.21e-12!130;UBERON:0000925!6.21e-12!130;UBERON:0006595!6.21e-12!130;UBERON:0004921!3.42e-11!126;UBERON:0004185!3.42e-11!126;UBERON:0000160!3.33e-09!43;UBERON:0004923!1.10e-08!24;UBERON:0000344!8.77e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.10e-12,47;UBERON:0001007,3.59e-11,116;UBERON:0001555,3.59e-11,116;UBERON:0007026,3.59e-11,116;UBERON:0004119,5.24e-11,118;UBERON:0000925,5.24e-11,118;UBERON:0006595,5.24e-11,118;UBERON:0004921,2.65e-10,114;UBERON:0000160,2.05e-09,31;UBERON:0004923,1.10e-08,24;UBERON:0000344,8.77e-08,15|phase1_expression=6.24580503708696,66.654302859118,60.9698980781978,55.3509506691499,51.0913644545274,23.6709773395765,14.0167584357315,2.84071311571468,1.12630977721333,0.936258105287974,0.68487187290202,1.51567102091139,2.56801094896809,3.3219752919219,12.9912807108108,10.1237633694913,12.5921138063066,17.9813434254195,20.2929361736493,19.5219239827094,14.1171861650776,12.4113689001107,12.7987896678078,21.2789922315231,22.940928106717,47.0870210574317,37.4762936658395,32.3206849028834,24.893067948785,33.5200072580708,14.6342137032501,2.54012269383853,1.23012957516914,0,7.79899373328441,7.48055904113216,6.12508068787107,59.4314915646409,67.9761749735706,68.0580867165938,57.6466858270394,51.2284113718834,72.3410426016419,6.29484089877886,5.87986201073184,7.34187008646726,4.69434806608824,3.92445281484804,3.95435128922049,6.22175677037707,2.51975558925653,2.87505128729943,16.6104779997159,2.17608642603403,5.04140698713696,5.65970759279083,6.5902691185914,10.3134418455488,2.22548106945558,1.5869729378161,3.1691570175309,1.0165335962074,7.11435836888911,6.74924787961049,4.94433181283487,5.6838409195688,4.19440154725767,4.61061966385865,5.70292867696627,3.24014251996058,3.36519938162211,0.571301968807607,4.19650227808066,3.79721477566358,3.64212789869298,5.51531271966013,1.10115880999389,4.72443150915195,6.29786786350598,2.63772575460388,1.9212405156506,3.12548022334056,3.90856198601933,7.87867654044352,6.1119299110724,7.36571463684169,5.83723891276322,4.10078780815661,5.90664307998836,12.1670211771925,6.66688324013859,4.30211938490693,2.03991400112325,3.2382191498269,5.84798775702902,3.13618820968135,8.14577636764161,11.2484012901518,7.79358013808606,11.6602059588412,8.30976176682415,10.2661181931454,15.2883143823987,28.4426681261332,11.4740251735943,12.92135313923,14.6602089054287,10.8474685733107,25.8937883647172,5.49235914539852,4.68410382268567,1.52232739156071,3.22861696158482,3.3158980921577,3.99801604261396,6.40899615781345,7.41584903203122,6.36237170447611,19.4614321428972,8.08834249737046,12.5879665522424,11.1521308221101,13.0474232852686,3.80615036115011,5.65506108396329,15.8383374229327,9.58520996047362,10.1983464268879,9.91147771169905,3.59497534571574,2.74500361691176,4.64921102817598,4.51943232499919,4.34716277461562,3.1168206683934,3.56930778749067,6.72139801412087,11.3210343255185,4.54900965180614,3.78795340595653,4.42409506073193,3.21862946206862,5.58192602396583,4.67184935290717,5.51095643125756,6.53379973452734,7.21503279109912,2.84573707812917,5.17363183038821,4.53854592402766,4.57472922826267,5.2606975782618,4.17070873838397,5.92028683087683,5.96768195583036,6.36909653819178,13.3420505589515,10.0365683774739,13.0715209721973,4.34964122324554,4.92504725960302,5.94204802821349,6.62885259638589,4.32881309844288,6.47921874126989,6.74348439776183,4.29237442239391,5.13767506415546,6.58239399653922,6.895033491322,5.43161023957233,5.84799949701329,5.04965265169416,4.02619256281115,3.57492912559016,3.80747065803352,37.9981600431368,11.1069237998689,6.18535926552179,4.64473343720877,6.57224052742676,9.27744213267376,5.55945109612176,7.98947629672748,18.0321043386914,8.56434564564857,10.0534083520108,10.9426059622633,7.21367122340745,13.4822911298133,16.2103537406021,20.9098336917086,0.948339504765408,5.59817711787671,4.50830942692322,7.94240178596726,5.04276466635827,5.89140887078676,7.27220176928959,6.34723636312289,5.18095801876537,5.42947521255922,4.74324203339438,4.50481785433454,4.32429789249047,6.97072548393047,7.70868461276311,7.71766911207734,6.87489799809833,8.91858026097513,7.62035565842666,6.58947391651396,14.3768206527355,10.0478055870496,7.17686648163489,6.56705082662491,4.4849353380478,8.20153986317724,12.3784637411625,6.44270800019648,7.49638891633319,6.78980343100753,6.80601720036656,6.70025029767263,6.903265585694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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19889
|HGNC=
|MCL_coexpression_id=163
|TSSclassifier=NA
|UniProt=uniprot:Q9EPK2,uniprot:B1B076,uniprot:B1B077
|association_with_transcript=0bp_to_ENSMUST00000067979,ENSMUST00000115387,ENSMUST00000134349,ENSMUST00000169495,NM_133669,uc009ssv.1,uc009ssw.1,uc009ssx.1,uc012hfe.1_5end
|cluster_id=chrX:19941681..19941742,+
|description=CAGE_peak_1_at_Rp2h_5end
|id=chrX:19941681..19941742,+
|ontology_enrichment_celltype=CL:0002076!5.51e-07!15
|ontology_enrichment_celltype_v019_2=CL:0002076,5.51e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!4.34e-12!128;UBERON:0001555!4.34e-12!128;UBERON:0007026!4.34e-12!128;UBERON:0005409!4.82e-12!59;UBERON:0004119!6.21e-12!130;UBERON:0000925!6.21e-12!130;UBERON:0006595!6.21e-12!130;UBERON:0004921!3.42e-11!126;UBERON:0004185!3.42e-11!126;UBERON:0000160!3.33e-09!43;UBERON:0004923!1.10e-08!24;UBERON:0000344!8.77e-08!15
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.10e-12,47;UBERON:0001007,3.59e-11,116;UBERON:0001555,3.59e-11,116;UBERON:0007026,3.59e-11,116;UBERON:0004119,5.24e-11,118;UBERON:0000925,5.24e-11,118;UBERON:0006595,5.24e-11,118;UBERON:0004921,2.65e-10,114;UBERON:0000160,2.05e-09,31;UBERON:0004923,1.10e-08,24;UBERON:0000344,8.77e-08,15
|phase1_expression=6.24580503708696,66.654302859118,60.9698980781978,55.3509506691499,51.0913644545274,23.6709773395765,14.0167584357315,2.84071311571468,1.12630977721333,0.936258105287974,0.68487187290202,1.51567102091139,2.56801094896809,3.3219752919219,12.9912807108108,10.1237633694913,12.5921138063066,17.9813434254195,20.2929361736493,19.5219239827094,14.1171861650776,12.4113689001107,12.7987896678078,21.2789922315231,22.940928106717,47.0870210574317,37.4762936658395,32.3206849028834,24.893067948785,33.5200072580708,14.6342137032501,2.54012269383853,1.23012957516914,0,7.79899373328441,7.48055904113216,6.12508068787107,59.4314915646409,67.9761749735706,68.0580867165938,57.6466858270394,51.2284113718834,72.3410426016419,6.29484089877886,5.87986201073184,7.34187008646726,4.69434806608824,3.92445281484804,3.95435128922049,6.22175677037707,2.51975558925653,2.87505128729943,16.6104779997159,2.17608642603403,5.04140698713696,5.65970759279083,6.5902691185914,10.3134418455488,2.22548106945558,1.5869729378161,3.1691570175309,1.0165335962074,7.11435836888911,6.74924787961049,4.94433181283487,5.6838409195688,4.19440154725767,4.61061966385865,5.70292867696627,3.24014251996058,3.36519938162211,0.571301968807607,4.19650227808066,3.79721477566358,3.64212789869298,5.51531271966013,1.10115880999389,4.72443150915195,6.29786786350598,2.63772575460388,1.9212405156506,3.12548022334056,3.90856198601933,7.87867654044352,6.1119299110724,7.36571463684169,5.83723891276322,4.10078780815661,5.90664307998836,12.1670211771925,6.66688324013859,4.30211938490693,2.03991400112325,3.2382191498269,5.84798775702902,3.13618820968135,8.14577636764161,11.2484012901518,7.79358013808606,11.6602059588412,8.30976176682415,10.2661181931454,15.2883143823987,28.4426681261332,11.4740251735943,12.92135313923,14.6602089054287,10.8474685733107,25.8937883647172,5.49235914539852,4.68410382268567,1.52232739156071,3.22861696158482,3.3158980921577,3.99801604261396,6.40899615781345,7.41584903203122,6.36237170447611,19.4614321428972,8.08834249737046,12.5879665522424,11.1521308221101,13.0474232852686,3.80615036115011,5.65506108396329,15.8383374229327,9.58520996047362,10.1983464268879,9.91147771169905,3.59497534571574,2.74500361691176,4.64921102817598,4.51943232499919,4.34716277461562,3.1168206683934,3.56930778749067,6.72139801412087,11.3210343255185,4.54900965180614,3.78795340595653,4.42409506073193,3.21862946206862,5.58192602396583,4.67184935290717,5.51095643125756,6.53379973452734,7.21503279109912,2.84573707812917,5.17363183038821,4.53854592402766,4.57472922826267,5.2606975782618,4.17070873838397,5.92028683087683,5.96768195583036,6.36909653819178,13.3420505589515,10.0365683774739,13.0715209721973,4.34964122324554,4.92504725960302,5.94204802821349,6.62885259638589,4.32881309844288,6.47921874126989,6.74348439776183,4.29237442239391,5.13767506415546,6.58239399653922,6.895033491322,5.43161023957233,5.84799949701329,5.04965265169416,4.02619256281115,3.57492912559016,3.80747065803352,37.9981600431368,11.1069237998689,6.18535926552179,4.64473343720877,6.57224052742676,9.27744213267376,5.55945109612176,7.98947629672748,18.0321043386914,8.56434564564857,10.0534083520108,10.9426059622633,7.21367122340745,13.4822911298133,16.2103537406021,20.9098336917086,0.948339504765408,5.59817711787671,4.50830942692322,7.94240178596726,5.04276466635827,5.89140887078676,7.27220176928959,6.34723636312289,5.18095801876537,5.42947521255922,4.74324203339438,4.50481785433454,4.32429789249047,6.97072548393047,7.70868461276311,7.71766911207734,6.87489799809833,8.91858026097513,7.62035565842666,6.58947391651396,14.3768206527355,10.0478055870496,7.17686648163489,6.56705082662491,4.4849353380478,8.20153986317724,12.3784637411625,6.44270800019648,7.49638891633319,6.78980343100753,6.80601720036656,6.70025029767263,6.9032655856944,10.3420833364633,10.5615546551148,10.6303051031412,13.2347457985714,10.651115456523,9.84304396635605,15.6220983268033,27.142431109069,36.4416808158535,6.39293554924747,6.07060841870411,3.05046120976805,3.39913891117389,5.08198330667694,3.53459298086122,6.31016438832513,5.0757036758563,6.46270193198397,7.40803273652911,10.0259403337077,16.9845918473299,8.50102473517278,7.59865230569411,7.11518000303742,1.28528526568723,8.09058485687131,3.38324646967785,8.47012188638596,9.73323725537959,10.619611067197,2.42780636154981,6.04647113929502,7.92141334974772,4.13422650033082,6.7635732547664,8.5281336745513,8.72480950746013,9.26893183800275,10.4292130118819,9.48767477174989,8.25084345985495,4.42571487479924,6.30213829109586,1.16422815404479,5.78709994585299,4.61084607469911,4.8159580752559,4.60737257685939,1.8267896946876,4.92810586933792,7.20229040936989,7.05690873775878,5.27636009412736,7.10443477461984,6.27254419252821,5.13301079213487,2.9545361954111,12.2421951384537,5.00648315428376,11.7900907750518,7.84270098260245,11.1116716421827,11.8672127912955,13.6694227721025,9.37990510146743,6.28920190977265,8.53703859174314,8.56839837587428,5.72802370809068,5.852215881251,9.96265388921559,8.3164112432787,6.89991376847747,7.86105229486239,7.95699643670442,8.10003866108292,8.63794608547298,20.9976256732704,10.5627683224777,46.2228209721036,4.33597983527538,4.79829622325583,6.61134040369762,3.48731523389874,5.06868376472335,4.45957506853865,5.59878854828985,2.62148361064277,2.41584120826006,19.8740704317927,11.0603892219862,4.05450430580328,5.34096977257102,7.01572444080093,6.80301443536429,8.34461690081313,7.21172697119813,7.08909730437971,6.86571859647404,7.46826705218998,5.74709255279991,5.75001496364539,9.23633679747163,9.70078288107022,4.76133805591944,6.88156455459601,4.84454825691169,5.87596157274275,9.07991091951295,8.44571139530319,9.15758121336325,4.93047271881851,7.02200945649509,2.25900737046827,7.36520378411483,4.01026859407578,6.8741272937475,4.7955776383945,3.0215755895588,6.07520250208625,4.5032120322422,2.26571204492102,2.5888015587591,5.91587881229807,4.78829848081237,5.29274177837816,4.61902762429759,4.40187641518763,6.80220981265052,5.11167473943715,3.7086310303001,7.38114182061175,4.29585259998456,6.08350319736575,4.90428487603798,5.43120743325318,5.12201219238954,6.83482080571798,5.23923060411381,8.22778714208474,6.94473193669338,4.12085900803307,5.5935589651071,4.4573002810104,6.38912902173615,5.48403236878838,5.0871245821315,5.64656282491984,4.73841804193388,4.39027134894654,5.26139422875686,5.16055632614275,3.36685362994643,5.69448086996036,6.79680928391388,5.32000356120596,6.66228417099654,5.20847849649082,3.49734809113124,4.44470056046276,4.94203424311086,3.63447830930802,8.16188250742207,6.72416723299222
|short_description=p1@Rp2h
}}

Revision as of 05:25, 6 August 2015

Short description:p1@Rp2h
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rp2h_5end
Coexpression cluster:MCL_coexpression_mm9:163
Association with transcript: 0bp_to_ENSMUST00000067979, ENSMUST00000115387, ENSMUST00000134349, ENSMUST00000169495, NM_133669, uc009ssv.1, uc009ssw.1, uc009ssx.1, uc012hfe.1_5end
EntrezGene:19889
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rp2h

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I566.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I660.97
CD326+ enterocyte, pool1.CNhs13542.11848-124I355.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I451.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.02
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.12
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.80
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.94
GP2+ M cell, pool1.CNhs13228.11845-124H947.09
GP2+ M cell, pool2.CNhs13231.11846-124I137.48
GP2+ M cell, pool3.CNhs13240.11847-124I232.32
Ileum epithelium, pool1.CNhs13199.10252-104B924.89
Ileum epithelium, pool2.CNhs13232.10253-104C133.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G859.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H167.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H368.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G957.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H251.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H472.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.61
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D95.91
Mouse Schwann, donor2.CNhs12573.11746-123F912.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.85
accessory axillary lymph node, adult.CNhs10475.1063-29H925.89
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I36.41
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H16.36
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F58.09
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H715.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.91
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.32
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C65.51
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.07
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C66.48
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G15.43
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I338.00
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D86.57
intestine, embryo E16.CNhs10585.463-22H49.28
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F210.94
intestine, neonate N10.CNhs11098.755-23A57.21
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E316.21
intestine, neonate N30.CNhs11131.1384-42G120.91
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G75.89
kidney, neonate N10.CNhs11206.758-6D57.27
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F35.18
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E16.97
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F57.72
liver, embryo E17.CNhs10510.481-18A36.87
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F47.62
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B112.38
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F87.50
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C610.34
lung, neonate N06.CNhs11212.683-20E510.56
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E613.23
lung, neonate N20.CNhs11109.822-18A410.65
lung, neonate N25.CNhs11119.1359-25C79.84
lung, neonate N30.CNhs11133.1394-42H215.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A136.44
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I78.09
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I48.47
oviduct, adult pregnant day01.CNhs10500.988-6G69.73
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E57.92
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H36.27
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G211.79
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F211.11
spleen, neonate N10.CNhs11116.752-24D111.87
spleen, neonate N20.CNhs11112.824-19H113.67
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.57
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D48.32
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C67.86
stomach, neonate N03.CNhs11193.1340-24B87.96
stomach, neonate N07.CNhs11210.718-18A98.10
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I121.00
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G546.22
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B74.46
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E219.87
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C57.02
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G48.34
thymus, neonate N02.CNhs11181.1541-43F87.21
thymus, neonate N03.CNhs11137.2104-43C77.09
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D37.47
thymus, neonate N10.CNhs11194.748-24E45.75
thymus, neonate N20.CNhs11186.820-7A25.75
thymus, neonate N25.CNhs11125.1362-25G79.24
thymus, neonate N30.CNhs11132.1393-42G29.70
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F58.45
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D18.16
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endo-epithelial cell5.51e-0715

Uber anatomy
Ontology termp-valuen
gastrointestinal system5.10e-1247
digestive system3.59e-11116
digestive tract3.59e-11116
primitive gut3.59e-11116
endoderm-derived structure5.24e-11118
endoderm5.24e-11118
presumptive endoderm5.24e-11118
subdivision of digestive tract2.65e-10114
intestine2.05e-0931
organ component layer1.10e-0824
mucosa8.77e-0815
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