FFCP PHASE1:Mm9::chr9:65992829..65992835,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:65992829..65992835,+|id=chr9:65992829..65992835,+|ontology_enrichment_celltype=CL:0002563!4.70e-22!9;CL:0002251!4.70e-22!9;CL:0000239!5.02e-14!6;CL:0000677!5.02e-14!6;CL:0000212!5.02e-14!6;CL:0000584!5.02e-14!6;CL:0000066!5.88e-14!25;CL:0002076!9.96e-13!15;CL:0000075!5.63e-12!7;CL:0000473!5.32e-11!3;CL:0000627!5.32e-11!3;CL:0000682!5.32e-11!3;CL:0002250!1.10e-09!3;CL:0000223!3.15e-09!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.74e-30,6;CL:0000677,1.74e-30,6;CL:0000584,1.74e-30,6;CL:0000075,3.68e-26,7;CL:0000682,4.72e-23,3;CL:0002563,2.20e-20,9;CL:0002251,2.20e-20,9;CL:0000066,2.51e-18,25;CL:0002076,2.90e-12,15;CL:0000473,3.03e-10,7;CL:0000223,3.36e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.98e-34!15;UBERON:0001242!2.95e-28!13;UBERON:0000060!2.95e-28!13;UBERON:0001262!2.95e-28!13;UBERON:0004786!2.95e-28!13;UBERON:0003350!4.70e-22!9;UBERON:0004808!4.70e-22!9;UBERON:0001277!4.70e-22!9;UBERON:0004923!1.63e-20!24;UBERON:0000485!8.11e-18!11;UBERON:0000160!1.08e-11!43;UBERON:0005409!4.88e-09!59;UBERON:0001962!8.02e-08!2;UBERON:0001961!8.02e-08!2;UBERON:0001744!8.02e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.41e-38,15;UBERON:0001242,6.06e-27,13;UBERON:0001262,6.06e-27,13;UBERON:0004786,6.06e-27,13;UBERON:0004923,6.60e-24,24;UBERON:0003350,2.20e-20,9;UBERON:0004808,2.20e-20,9;UBERON:0001277,2.20e-20,9;UBERON:0000485,1.07e-16,11;UBERON:0001962,8.11e-16,2;UBERON:0001961,8.11e-16,2;UBERON:0001744,8.11e-16,2;UBERON:0000160,4.29e-11,31;UBERON:0002465,7.26e-11,3;UBERON:0003199,7.41e-09,1;UBERON:0005409,3.72e-07,47|phase1_expression=0,6.2815573375085,9.09998478779072,1.20985684522732,0,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,3.03985603307473,5.73523202667925,4.59385571292016,4.73838195774982,6.24866574789078,0.380046838912748,0,2.88249663851896,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.241251699712623,0.477489376012546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:65992829..65992835,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:65992829..65992835,+ | |||
|description=CAGE_peak_at_chr9:65992829..65992835,+ | |||
|id=chr9:65992829..65992835,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.70e-22!9;CL:0002251!4.70e-22!9;CL:0000239!5.02e-14!6;CL:0000677!5.02e-14!6;CL:0000212!5.02e-14!6;CL:0000584!5.02e-14!6;CL:0000066!5.88e-14!25;CL:0002076!9.96e-13!15;CL:0000075!5.63e-12!7;CL:0000473!5.32e-11!3;CL:0000627!5.32e-11!3;CL:0000682!5.32e-11!3;CL:0002250!1.10e-09!3;CL:0000223!3.15e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.74e-30,6;CL:0000677,1.74e-30,6;CL:0000584,1.74e-30,6;CL:0000075,3.68e-26,7;CL:0000682,4.72e-23,3;CL:0002563,2.20e-20,9;CL:0002251,2.20e-20,9;CL:0000066,2.51e-18,25;CL:0002076,2.90e-12,15;CL:0000473,3.03e-10,7;CL:0000223,3.36e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.98e-34!15;UBERON:0001242!2.95e-28!13;UBERON:0000060!2.95e-28!13;UBERON:0001262!2.95e-28!13;UBERON:0004786!2.95e-28!13;UBERON:0003350!4.70e-22!9;UBERON:0004808!4.70e-22!9;UBERON:0001277!4.70e-22!9;UBERON:0004923!1.63e-20!24;UBERON:0000485!8.11e-18!11;UBERON:0000160!1.08e-11!43;UBERON:0005409!4.88e-09!59;UBERON:0001962!8.02e-08!2;UBERON:0001961!8.02e-08!2;UBERON:0001744!8.02e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.41e-38,15;UBERON:0001242,6.06e-27,13;UBERON:0001262,6.06e-27,13;UBERON:0004786,6.06e-27,13;UBERON:0004923,6.60e-24,24;UBERON:0003350,2.20e-20,9;UBERON:0004808,2.20e-20,9;UBERON:0001277,2.20e-20,9;UBERON:0000485,1.07e-16,11;UBERON:0001962,8.11e-16,2;UBERON:0001961,8.11e-16,2;UBERON:0001744,8.11e-16,2;UBERON:0000160,4.29e-11,31;UBERON:0002465,7.26e-11,3;UBERON:0003199,7.41e-09,1;UBERON:0005409,3.72e-07,47 | |||
|phase1_expression=0,6.2815573375085,9.09998478779072,1.20985684522732,0,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,3.03985603307473,5.73523202667925,4.59385571292016,4.73838195774982,6.24866574789078,0.380046838912748,0,2.88249663851896,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.241251699712623,0.477489376012546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:65992829..65992835,+ | |||
}} |
Latest revision as of 12:31, 5 August 2015
Short description: | p@chr9:65992829..65992835, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:65992829..65992835, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.74e-30 | 6 |
gut absorptive cell | 1.74e-30 | 6 |
enterocyte | 1.74e-30 | 6 |
columnar/cuboidal epithelial cell | 3.68e-26 | 7 |
M cell of gut | 4.72e-23 | 3 |
intestinal epithelial cell | 2.20e-20 | 9 |
epithelial cell of alimentary canal | 2.20e-20 | 9 |
epithelial cell | 2.51e-18 | 25 |
endo-epithelial cell | 2.90e-12 | 15 |
defensive cell | 3.03e-10 | 7 |
endodermal cell | 3.36e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.41e-38 | 15 |
intestinal mucosa | 6.06e-27 | 13 |
wall of intestine | 6.06e-27 | 13 |
gastrointestinal system mucosa | 6.06e-27 | 13 |
organ component layer | 6.60e-24 | 24 |
epithelium of mucosa | 2.20e-20 | 9 |
gastrointestinal system epithelium | 2.20e-20 | 9 |
intestinal epithelium | 2.20e-20 | 9 |
simple columnar epithelium | 1.07e-16 | 11 |
gut-associated lymphoid tissue | 8.11e-16 | 2 |
mucosa-associated lymphoid tissue | 8.11e-16 | 2 |
lymphoid tissue | 8.11e-16 | 2 |
intestine | 4.29e-11 | 31 |
lymphoid system | 7.26e-11 | 3 |
egg chamber | 7.41e-09 | 1 |
gastrointestinal system | 3.72e-07 | 47 |