FFCP PHASE1:Mm9::chr7:53493867..53493883,-: Difference between revisions
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{{FFCP|EntrezGene=72088|HGNC=|MCL_coexpression_id=12|UniProt=E9QMN1|association_with_transcript=0bp_to_ENSMUST00000009667_5end|description=CAGE_peak_2_at_Ush1c_5end|id=chr7:53493867..53493883,-|ontology_enrichment_celltype=CL:0002563!1.58e-08!9;CL:0002251!1.58e-08!9;CL:0000075!3.52e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.07e-12,9;CL:0002251,1.07e-12,9;CL:0000075,1.49e-10,7;CL:0000239,1.82e-09,6;CL:0000677,1.82e-09,6;CL:0000584,1.82e-09,6;CL:0000066,7.75e-09,25;CL:0002076,9.81e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.73e-24!43;UBERON:0005409!5.61e-20!59;UBERON:0000344!8.61e-14!15;UBERON:0001242!3.94e-12!13;UBERON:0000060!3.94e-12!13;UBERON:0001262!3.94e-12!13;UBERON:0004786!3.94e-12!13;UBERON:0000485!7.85e-10!11;UBERON:0003350!1.58e-08!9;UBERON:0004808!1.58e-08!9;UBERON:0001277!1.58e-08!9;UBERON:0004923!4.97e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.73e-36,31;UBERON:0005409,5.79e-24,47;UBERON:0000344,4.07e-21,15;UBERON:0001242,1.85e-18,13;UBERON:0001262,1.85e-18,13;UBERON:0004786,1.85e-18,13;UBERON:0000485,8.83e-15,11;UBERON:0003350,1.07e-12,9;UBERON:0004808,1.07e-12,9;UBERON:0001277,1.07e-12,9;UBERON:0004923,1.86e-11,24;UBERON:0002108,3.95e-07,4|phase1_expression=6.24580503708696,46.0647538083957,25.0249581664245,39.9252758925016,27.0483694171027,20.1455126294268,12.8486952327539,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,26.5587421837055,23.8585652309857,29.285830169866,26.7072437618626,33.3980410663128,42.9452927971405,29.7395553116718,23.5034341294623,0,0,0,15.3091358468176,9.80784407615105,10.4126371693808,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,4.0728881838208,0,0,0,13.661811718338,0,0,0,0,0,0,7.07940054258172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,33.2094171771169,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,0,0.232533944750408,1.07309360559848,0.233530684734339,0.822799249567402,0.985004784474571,1.29710095273369,1.16959989940266,1.75640092232841,1.47627060636409,0,0,68.0662692946624,20.3626936330929,0,0.464473343720877,2.44848176511977,8.47070803418039,7.78323153457046,15.4082757151173,37.9623249235609,19.7638745668813,22.368833583224,20.4925166202385,21.8359777573415,32.357498711552,28.0979464837102,36.8411355520579,0.379335801906163,0.685491075658373,0,3.05476991767971,3.49114476901726,3.7873342740772,9.80166325425988,14.3181843540214,18.5258498852822,16.0416313098341,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,1.51161778482376,0.565815239267694,0.295301892880773,0.922305443831782,4.9101375701962,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0,0,0,0,0,29.4395644996149,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.756037385752609,0.418176592028937,1.09181281873089,0.134864346384821,0.495920734352016,0,26.311839578234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.919217542250071,0.888986911206461,1.64828045791115,0.320919209591815,0.252697211763798,1.2673964994512,0.943131706930381,0.37456602987953,1.02440243847791,0.976402972245426,2.38146845641537,1.0429589335037,0.192909220463705,1.23625770240992,1.32479028120958,1.37147700954166,0.70990322463735,1.66905332963125,1.0174249164263,0.564656282491984,0.507687647350059,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.830445126869219,0.886540341380071,0,0.464810523557898,0.771626443924566,0,0.467863216890817,1.28922632428979,0,0,0|short_description=p2@Ush1c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72088 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QMN1 | |||
|association_with_transcript=0bp_to_ENSMUST00000009667_5end | |||
|cluster_id=chr7:53493867..53493883,- | |||
|description=CAGE_peak_2_at_Ush1c_5end | |||
|id=chr7:53493867..53493883,- | |||
|ontology_enrichment_celltype=CL:0002563!1.58e-08!9;CL:0002251!1.58e-08!9;CL:0000075!3.52e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.07e-12,9;CL:0002251,1.07e-12,9;CL:0000075,1.49e-10,7;CL:0000239,1.82e-09,6;CL:0000677,1.82e-09,6;CL:0000584,1.82e-09,6;CL:0000066,7.75e-09,25;CL:0002076,9.81e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.73e-24!43;UBERON:0005409!5.61e-20!59;UBERON:0000344!8.61e-14!15;UBERON:0001242!3.94e-12!13;UBERON:0000060!3.94e-12!13;UBERON:0001262!3.94e-12!13;UBERON:0004786!3.94e-12!13;UBERON:0000485!7.85e-10!11;UBERON:0003350!1.58e-08!9;UBERON:0004808!1.58e-08!9;UBERON:0001277!1.58e-08!9;UBERON:0004923!4.97e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.73e-36,31;UBERON:0005409,5.79e-24,47;UBERON:0000344,4.07e-21,15;UBERON:0001242,1.85e-18,13;UBERON:0001262,1.85e-18,13;UBERON:0004786,1.85e-18,13;UBERON:0000485,8.83e-15,11;UBERON:0003350,1.07e-12,9;UBERON:0004808,1.07e-12,9;UBERON:0001277,1.07e-12,9;UBERON:0004923,1.86e-11,24;UBERON:0002108,3.95e-07,4 | |||
|phase1_expression=6.24580503708696,46.0647538083957,25.0249581664245,39.9252758925016,27.0483694171027,20.1455126294268,12.8486952327539,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,26.5587421837055,23.8585652309857,29.285830169866,26.7072437618626,33.3980410663128,42.9452927971405,29.7395553116718,23.5034341294623,0,0,0,15.3091358468176,9.80784407615105,10.4126371693808,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,4.0728881838208,0,0,0,13.661811718338,0,0,0,0,0,0,7.07940054258172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,33.2094171771169,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,0,0.232533944750408,1.07309360559848,0.233530684734339,0.822799249567402,0.985004784474571,1.29710095273369,1.16959989940266,1.75640092232841,1.47627060636409,0,0,68.0662692946624,20.3626936330929,0,0.464473343720877,2.44848176511977,8.47070803418039,7.78323153457046,15.4082757151173,37.9623249235609,19.7638745668813,22.368833583224,20.4925166202385,21.8359777573415,32.357498711552,28.0979464837102,36.8411355520579,0.379335801906163,0.685491075658373,0,3.05476991767971,3.49114476901726,3.7873342740772,9.80166325425988,14.3181843540214,18.5258498852822,16.0416313098341,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,1.51161778482376,0.565815239267694,0.295301892880773,0.922305443831782,4.9101375701962,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0,0,0,0,0,29.4395644996149,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.756037385752609,0.418176592028937,1.09181281873089,0.134864346384821,0.495920734352016,0,26.311839578234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.919217542250071,0.888986911206461,1.64828045791115,0.320919209591815,0.252697211763798,1.2673964994512,0.943131706930381,0.37456602987953,1.02440243847791,0.976402972245426,2.38146845641537,1.0429589335037,0.192909220463705,1.23625770240992,1.32479028120958,1.37147700954166,0.70990322463735,1.66905332963125,1.0174249164263,0.564656282491984,0.507687647350059,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.830445126869219,0.886540341380071,0,0.464810523557898,0.771626443924566,0,0.467863216890817,1.28922632428979,0,0,0 | |||
|short_description=p2@Ush1c | |||
}} |
Revision as of 09:32, 5 August 2015
Short description: | p2@Ush1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ush1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000009667_5end |
EntrezGene: | 72088 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.07e-12 | 9 |
epithelial cell of alimentary canal | 1.07e-12 | 9 |
columnar/cuboidal epithelial cell | 1.49e-10 | 7 |
brush border epithelial cell | 1.82e-09 | 6 |
gut absorptive cell | 1.82e-09 | 6 |
enterocyte | 1.82e-09 | 6 |
epithelial cell | 7.75e-09 | 25 |
endo-epithelial cell | 9.81e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.73e-36 | 31 |
gastrointestinal system | 5.79e-24 | 47 |
mucosa | 4.07e-21 | 15 |
intestinal mucosa | 1.85e-18 | 13 |
wall of intestine | 1.85e-18 | 13 |
gastrointestinal system mucosa | 1.85e-18 | 13 |
simple columnar epithelium | 8.83e-15 | 11 |
epithelium of mucosa | 1.07e-12 | 9 |
gastrointestinal system epithelium | 1.07e-12 | 9 |
intestinal epithelium | 1.07e-12 | 9 |
organ component layer | 1.86e-11 | 24 |
small intestine | 3.95e-07 | 4 |