FFCP PHASE1:Mm9::chr7:52317191..52317193,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:52317191..52317193,+|id=chr7:52317191..52317193,+|ontology_enrichment_celltype=CL:0002563!2.85e-14!9;CL:0002251!2.85e-14!9;CL:0000066!1.46e-12!25;CL:0002076!5.40e-11!15;CL:0000075!5.53e-11!7;CL:0000239!4.33e-10!6;CL:0000677!4.33e-10!6;CL:0000212!4.33e-10!6;CL:0000584!4.33e-10!6;CL:0000223!4.84e-09!20|ontology_enrichment_celltype_v019_2=CL:0002563,1.93e-53,9;CL:0002251,1.93e-53,9;CL:0000066,8.68e-39,25;CL:0000239,2.85e-36,6;CL:0000677,2.85e-36,6;CL:0000584,2.85e-36,6;CL:0002076,9.66e-32,15;CL:0000075,4.58e-31,7;CL:0000223,6.24e-29,20;CL:0002250,1.36e-18,3;CL:0000682,5.25e-18,3;CL:0000473,4.82e-08,7;CL:0002321,2.07e-07,70;CL:0000213,6.32e-07,1;CL:0002078,6.32e-07,1;CL:0000115,6.32e-07,1;CL:0002262,6.32e-07,1;CL:1000398,6.32e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!3.15e-19!13;UBERON:0000060!3.15e-19!13;UBERON:0001262!3.15e-19!13;UBERON:0004786!3.15e-19!13;UBERON:0000344!9.40e-19!15;UBERON:0000160!2.60e-18!43;UBERON:0005409!1.93e-17!59;UBERON:0003350!2.85e-14!9;UBERON:0004808!2.85e-14!9;UBERON:0001277!2.85e-14!9;UBERON:0000485!1.61e-13!11;UBERON:0004923!2.23e-13!24;UBERON:0004119!4.30e-11!130;UBERON:0000925!4.30e-11!130;UBERON:0006595!4.30e-11!130;UBERON:0001007!1.27e-10!128;UBERON:0001555!1.27e-10!128;UBERON:0007026!1.27e-10!128;UBERON:0004921!3.71e-10!126;UBERON:0004185!3.71e-10!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.93e-53,9;UBERON:0004808,1.93e-53,9;UBERON:0001277,1.93e-53,9;UBERON:0001242,5.32e-45,13;UBERON:0001262,5.32e-45,13;UBERON:0004786,5.32e-45,13;UBERON:0000485,1.39e-43,11;UBERON:0000344,7.15e-39,15;UBERON:0004923,6.58e-24,24;UBERON:0000160,5.28e-22,31;UBERON:0005409,4.49e-14,47;UBERON:0003929,8.86e-10,55;UBERON:0000490,6.16e-08,66;UBERON:0005911,1.55e-07,69;UBERON:0002394,6.32e-07,1;UBERON:0001281,6.32e-07,1;UBERON:0000353,6.32e-07,1;UBERON:0003497,6.32e-07,1;UBERON:0003909,6.32e-07,1;UBERON:0003928,6.32e-07,1;UBERON:0003835,6.32e-07,1;UBERON:0003513,6.32e-07,1;UBERON:0001280,6.32e-07,1;UBERON:0004647,6.32e-07,1;UBERON:0002294,6.32e-07,1;UBERON:0001173,6.32e-07,1;UBERON:0004912,6.32e-07,1;UBERON:0005171,6.32e-07,1|phase1_expression=0,15.0059425284925,6.3699893514535,14.8207463540347,16.5295590882295,3.69334398206158,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0,3.44539178469012,3.01533397311352,1.72376986148711,0.760093677825496,1.26015064879965,0.665191531965914,0,0,0,10.3986583110459,2.32728503501889,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0.38660238396628,0,0.444756087689741,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.864552199498777,0.597423819763102,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0,0.316182685621286,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0.63549621259146,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:52317191..52317193,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:52317191..52317193,+ | |||
|description=CAGE_peak_at_chr7:52317191..52317193,+ | |||
|id=chr7:52317191..52317193,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.85e-14!9;CL:0002251!2.85e-14!9;CL:0000066!1.46e-12!25;CL:0002076!5.40e-11!15;CL:0000075!5.53e-11!7;CL:0000239!4.33e-10!6;CL:0000677!4.33e-10!6;CL:0000212!4.33e-10!6;CL:0000584!4.33e-10!6;CL:0000223!4.84e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.93e-53,9;CL:0002251,1.93e-53,9;CL:0000066,8.68e-39,25;CL:0000239,2.85e-36,6;CL:0000677,2.85e-36,6;CL:0000584,2.85e-36,6;CL:0002076,9.66e-32,15;CL:0000075,4.58e-31,7;CL:0000223,6.24e-29,20;CL:0002250,1.36e-18,3;CL:0000682,5.25e-18,3;CL:0000473,4.82e-08,7;CL:0002321,2.07e-07,70;CL:0000213,6.32e-07,1;CL:0002078,6.32e-07,1;CL:0000115,6.32e-07,1;CL:0002262,6.32e-07,1;CL:1000398,6.32e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!3.15e-19!13;UBERON:0000060!3.15e-19!13;UBERON:0001262!3.15e-19!13;UBERON:0004786!3.15e-19!13;UBERON:0000344!9.40e-19!15;UBERON:0000160!2.60e-18!43;UBERON:0005409!1.93e-17!59;UBERON:0003350!2.85e-14!9;UBERON:0004808!2.85e-14!9;UBERON:0001277!2.85e-14!9;UBERON:0000485!1.61e-13!11;UBERON:0004923!2.23e-13!24;UBERON:0004119!4.30e-11!130;UBERON:0000925!4.30e-11!130;UBERON:0006595!4.30e-11!130;UBERON:0001007!1.27e-10!128;UBERON:0001555!1.27e-10!128;UBERON:0007026!1.27e-10!128;UBERON:0004921!3.71e-10!126;UBERON:0004185!3.71e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.93e-53,9;UBERON:0004808,1.93e-53,9;UBERON:0001277,1.93e-53,9;UBERON:0001242,5.32e-45,13;UBERON:0001262,5.32e-45,13;UBERON:0004786,5.32e-45,13;UBERON:0000485,1.39e-43,11;UBERON:0000344,7.15e-39,15;UBERON:0004923,6.58e-24,24;UBERON:0000160,5.28e-22,31;UBERON:0005409,4.49e-14,47;UBERON:0003929,8.86e-10,55;UBERON:0000490,6.16e-08,66;UBERON:0005911,1.55e-07,69;UBERON:0002394,6.32e-07,1;UBERON:0001281,6.32e-07,1;UBERON:0000353,6.32e-07,1;UBERON:0003497,6.32e-07,1;UBERON:0003909,6.32e-07,1;UBERON:0003928,6.32e-07,1;UBERON:0003835,6.32e-07,1;UBERON:0003513,6.32e-07,1;UBERON:0001280,6.32e-07,1;UBERON:0004647,6.32e-07,1;UBERON:0002294,6.32e-07,1;UBERON:0001173,6.32e-07,1;UBERON:0004912,6.32e-07,1;UBERON:0005171,6.32e-07,1 | |||
|phase1_expression=0,15.0059425284925,6.3699893514535,14.8207463540347,16.5295590882295,3.69334398206158,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0,3.44539178469012,3.01533397311352,1.72376986148711,0.760093677825496,1.26015064879965,0.665191531965914,0,0,0,10.3986583110459,2.32728503501889,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0.38660238396628,0,0.444756087689741,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.864552199498777,0.597423819763102,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0,0.316182685621286,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0.63549621259146,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:52317191..52317193,+ | |||
}} |
Latest revision as of 07:57, 5 August 2015
Short description: | p@chr7:52317191..52317193, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52317191..52317193, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.93e-53 | 9 |
epithelial cell of alimentary canal | 1.93e-53 | 9 |
epithelial cell | 8.68e-39 | 25 |
brush border epithelial cell | 2.85e-36 | 6 |
gut absorptive cell | 2.85e-36 | 6 |
enterocyte | 2.85e-36 | 6 |
endo-epithelial cell | 9.66e-32 | 15 |
columnar/cuboidal epithelial cell | 4.58e-31 | 7 |
endodermal cell | 6.24e-29 | 20 |
intestinal crypt stem cell | 1.36e-18 | 3 |
M cell of gut | 5.25e-18 | 3 |
defensive cell | 4.82e-08 | 7 |
embryonic cell | 2.07e-07 | 70 |
lining cell | 6.32e-07 | 1 |
meso-epithelial cell | 6.32e-07 | 1 |
endothelial cell | 6.32e-07 | 1 |
endothelial cell of sinusoid | 6.32e-07 | 1 |
endothelial cell of hepatic sinusoid | 6.32e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.93e-53 | 9 |
gastrointestinal system epithelium | 1.93e-53 | 9 |
intestinal epithelium | 1.93e-53 | 9 |
intestinal mucosa | 5.32e-45 | 13 |
wall of intestine | 5.32e-45 | 13 |
gastrointestinal system mucosa | 5.32e-45 | 13 |
simple columnar epithelium | 1.39e-43 | 11 |
mucosa | 7.15e-39 | 15 |
organ component layer | 6.58e-24 | 24 |
intestine | 5.28e-22 | 31 |
gastrointestinal system | 4.49e-14 | 47 |
gut epithelium | 8.86e-10 | 55 |
unilaminar epithelium | 6.16e-08 | 66 |
endo-epithelium | 1.55e-07 | 69 |
bile duct | 6.32e-07 | 1 |
hepatic sinusoid | 6.32e-07 | 1 |
parenchyma | 6.32e-07 | 1 |
abdomen blood vessel | 6.32e-07 | 1 |
sinusoid | 6.32e-07 | 1 |
digestive system duct | 6.32e-07 | 1 |
abdominal segment blood vessel | 6.32e-07 | 1 |
trunk blood vessel | 6.32e-07 | 1 |
liver parenchyma | 6.32e-07 | 1 |
liver lobule | 6.32e-07 | 1 |
biliary system | 6.32e-07 | 1 |
biliary tree | 6.32e-07 | 1 |
biliary bud | 6.32e-07 | 1 |
hepatic duct | 6.32e-07 | 1 |