FFCP PHASE1:Mm9::chr7:51591045..51591057,+: Difference between revisions
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{{FFCP|EntrezGene=243961|HGNC=|MCL_coexpression_id=367|UniProt=|association_with_transcript=-328bp_to_ENSMUST00000134470_5end|description=CAGE_peak_7_at_Shank1_5end|id=chr7:51591045..51591057,+|ontology_enrichment_celltype=CL:0000117!3.74e-18!23;CL:0000337!3.74e-18!23;CL:0000540!1.24e-11!33;CL:0000047!1.24e-11!33;CL:0000031!1.24e-11!33;CL:0000404!1.24e-11!33;CL:0000393!7.79e-09!39;CL:0000211!7.79e-09!39;CL:0002609!2.74e-08!6;CL:0002319!1.95e-07!43;CL:0000221!3.95e-07!44;CL:0000133!3.95e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-28,23;CL:0000337,1.70e-28,23;CL:0000540,6.00e-19,33;CL:0000047,6.00e-19,33;CL:0000031,6.00e-19,33;CL:0000404,6.00e-19,33;CL:0000393,1.44e-15,39;CL:0000211,1.44e-15,39;CL:0002319,7.71e-14,43;CL:0002609,8.01e-14,6;CL:0000221,1.86e-13,44;CL:0000133,1.86e-13,44;CL:0002613,9.60e-11,3;CL:0002608,2.71e-10,3;CL:0002321,2.37e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.93e-32!71;UBERON:0003075!5.93e-32!71;UBERON:0007284!5.93e-32!71;UBERON:0001049!7.74e-31!52;UBERON:0005068!7.74e-31!52;UBERON:0006241!7.74e-31!52;UBERON:0007135!7.74e-31!52;UBERON:0000033!2.26e-28!63;UBERON:0000955!1.01e-27!50;UBERON:0006238!1.01e-27!50;UBERON:0002616!1.32e-26!49;UBERON:0001017!3.05e-26!73;UBERON:0005743!3.05e-26!73;UBERON:0000073!3.98e-25!75;UBERON:0001016!3.98e-25!75;UBERON:0004121!1.99e-24!102;UBERON:0000924!1.99e-24!102;UBERON:0006601!1.99e-24!102;UBERON:0003056!3.32e-24!49;UBERON:0003080!3.47e-22!40;UBERON:0002020!2.31e-21!34;UBERON:0002780!5.29e-21!39;UBERON:0001890!5.29e-21!39;UBERON:0006240!5.29e-21!39;UBERON:0002791!3.37e-17!29;UBERON:0003528!3.37e-17!29;UBERON:0001893!3.37e-17!29;UBERON:0007811!7.17e-17!86;UBERON:0000153!3.04e-14!94;UBERON:0000956!4.83e-11!21;UBERON:0001869!4.83e-11!21;UBERON:0000203!4.83e-11!21;UBERON:0003076!5.48e-09!12;UBERON:0003057!5.48e-09!12;UBERON:0002420!1.31e-07!8;UBERON:0007245!1.31e-07!8;UBERON:0010009!1.31e-07!8;UBERON:0010011!1.31e-07!8;UBERON:0000454!1.31e-07!8;UBERON:0002619!2.28e-07!17;UBERON:0000025!4.22e-07!114;UBERON:0000369!5.12e-07!5;UBERON:0002435!5.12e-07!5;UBERON:0000204!5.12e-07!5;UBERON:0010082!5.12e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-30,54;UBERON:0001049,3.94e-29,52;UBERON:0005068,3.94e-29,52;UBERON:0006241,3.94e-29,52;UBERON:0007135,3.94e-29,52;UBERON:0001017,4.14e-28,73;UBERON:0001016,3.09e-27,75;UBERON:0000955,9.49e-27,47;UBERON:0006238,9.49e-27,47;UBERON:0002616,1.14e-24,46;UBERON:0002346,7.53e-23,64;UBERON:0003075,7.53e-23,64;UBERON:0007284,7.53e-23,64;UBERON:0004121,1.60e-20,95;UBERON:0000924,1.60e-20,95;UBERON:0006601,1.60e-20,95;UBERON:0010371,1.73e-19,73;UBERON:0003080,1.37e-17,40;UBERON:0002020,6.15e-16,34;UBERON:0002780,1.26e-15,39;UBERON:0001890,1.26e-15,39;UBERON:0006240,1.26e-15,39;UBERON:0010314,1.52e-14,92;UBERON:0002420,4.70e-14,8;UBERON:0007245,4.70e-14,8;UBERON:0010009,4.70e-14,8;UBERON:0010011,4.70e-14,8;UBERON:0000454,4.70e-14,8;UBERON:0003528,6.23e-14,29;UBERON:0002791,6.23e-14,29;UBERON:0001893,6.23e-14,29;UBERON:0003056,9.22e-14,49;UBERON:0003076,7.81e-13,12;UBERON:0003057,7.81e-13,12;UBERON:0000369,3.57e-11,5;UBERON:0002435,3.57e-11,5;UBERON:0000204,3.57e-11,5;UBERON:0010082,3.57e-11,5;UBERON:0000025,7.24e-11,114;UBERON:0004111,7.41e-10,122;UBERON:0004733,2.56e-09,6;UBERON:0004732,2.56e-09,6;UBERON:0002028,2.56e-09,6;UBERON:0007277,2.56e-09,6;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0011216,1.48e-07,194;UBERON:0002950,1.67e-07,4;UBERON:0001891,1.67e-07,4;UBERON:0009616,1.67e-07,4;UBERON:0010286,1.67e-07,4;UBERON:0001954,1.71e-07,7;UBERON:0003022,1.71e-07,7;UBERON:0002421,1.71e-07,7;UBERON:0000349,1.71e-07,7;UBERON:0002600,1.71e-07,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0,0,2.07379224616955,2.97013064329719,0.841299845405528,1.14260393761521,0.220868540951614,2.08234358665422,1.15014565221884,1.83843757322004,0,1.27687338085188,1.99688493233117,1.97829431595291,3.20206752608434,1.56274011167028,1.11673199600552,0,1.06958773443767,0.294628585473668,0.427115042397309,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0,0.304465478312141,0,0.60289056221049,0,0.251333182659351,0,0,0,0,0,0,0,5.85561594023094,1.67557365450764,0,0,0,0,2.69623150928681,0.457500602818626,2.63874139437015,0.521472960576829,0.511430914660661,1.24672826735736,1.62241263067758,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.476255494059295,0.12811372028485,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0.643011105094777,0.709360934569094,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0,0,0.463537303779422,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0,0,0|short_description=p7@Shank1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243961 | |||
|HGNC= | |||
|MCL_coexpression_id=367 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-328bp_to_ENSMUST00000134470_5end | |||
|cluster_id=chr7:51591045..51591057,+ | |||
|description=CAGE_peak_7_at_Shank1_5end | |||
|id=chr7:51591045..51591057,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.74e-18!23;CL:0000337!3.74e-18!23;CL:0000540!1.24e-11!33;CL:0000047!1.24e-11!33;CL:0000031!1.24e-11!33;CL:0000404!1.24e-11!33;CL:0000393!7.79e-09!39;CL:0000211!7.79e-09!39;CL:0002609!2.74e-08!6;CL:0002319!1.95e-07!43;CL:0000221!3.95e-07!44;CL:0000133!3.95e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-28,23;CL:0000337,1.70e-28,23;CL:0000540,6.00e-19,33;CL:0000047,6.00e-19,33;CL:0000031,6.00e-19,33;CL:0000404,6.00e-19,33;CL:0000393,1.44e-15,39;CL:0000211,1.44e-15,39;CL:0002319,7.71e-14,43;CL:0002609,8.01e-14,6;CL:0000221,1.86e-13,44;CL:0000133,1.86e-13,44;CL:0002613,9.60e-11,3;CL:0002608,2.71e-10,3;CL:0002321,2.37e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.93e-32!71;UBERON:0003075!5.93e-32!71;UBERON:0007284!5.93e-32!71;UBERON:0001049!7.74e-31!52;UBERON:0005068!7.74e-31!52;UBERON:0006241!7.74e-31!52;UBERON:0007135!7.74e-31!52;UBERON:0000033!2.26e-28!63;UBERON:0000955!1.01e-27!50;UBERON:0006238!1.01e-27!50;UBERON:0002616!1.32e-26!49;UBERON:0001017!3.05e-26!73;UBERON:0005743!3.05e-26!73;UBERON:0000073!3.98e-25!75;UBERON:0001016!3.98e-25!75;UBERON:0004121!1.99e-24!102;UBERON:0000924!1.99e-24!102;UBERON:0006601!1.99e-24!102;UBERON:0003056!3.32e-24!49;UBERON:0003080!3.47e-22!40;UBERON:0002020!2.31e-21!34;UBERON:0002780!5.29e-21!39;UBERON:0001890!5.29e-21!39;UBERON:0006240!5.29e-21!39;UBERON:0002791!3.37e-17!29;UBERON:0003528!3.37e-17!29;UBERON:0001893!3.37e-17!29;UBERON:0007811!7.17e-17!86;UBERON:0000153!3.04e-14!94;UBERON:0000956!4.83e-11!21;UBERON:0001869!4.83e-11!21;UBERON:0000203!4.83e-11!21;UBERON:0003076!5.48e-09!12;UBERON:0003057!5.48e-09!12;UBERON:0002420!1.31e-07!8;UBERON:0007245!1.31e-07!8;UBERON:0010009!1.31e-07!8;UBERON:0010011!1.31e-07!8;UBERON:0000454!1.31e-07!8;UBERON:0002619!2.28e-07!17;UBERON:0000025!4.22e-07!114;UBERON:0000369!5.12e-07!5;UBERON:0002435!5.12e-07!5;UBERON:0000204!5.12e-07!5;UBERON:0010082!5.12e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-30,54;UBERON:0001049,3.94e-29,52;UBERON:0005068,3.94e-29,52;UBERON:0006241,3.94e-29,52;UBERON:0007135,3.94e-29,52;UBERON:0001017,4.14e-28,73;UBERON:0001016,3.09e-27,75;UBERON:0000955,9.49e-27,47;UBERON:0006238,9.49e-27,47;UBERON:0002616,1.14e-24,46;UBERON:0002346,7.53e-23,64;UBERON:0003075,7.53e-23,64;UBERON:0007284,7.53e-23,64;UBERON:0004121,1.60e-20,95;UBERON:0000924,1.60e-20,95;UBERON:0006601,1.60e-20,95;UBERON:0010371,1.73e-19,73;UBERON:0003080,1.37e-17,40;UBERON:0002020,6.15e-16,34;UBERON:0002780,1.26e-15,39;UBERON:0001890,1.26e-15,39;UBERON:0006240,1.26e-15,39;UBERON:0010314,1.52e-14,92;UBERON:0002420,4.70e-14,8;UBERON:0007245,4.70e-14,8;UBERON:0010009,4.70e-14,8;UBERON:0010011,4.70e-14,8;UBERON:0000454,4.70e-14,8;UBERON:0003528,6.23e-14,29;UBERON:0002791,6.23e-14,29;UBERON:0001893,6.23e-14,29;UBERON:0003056,9.22e-14,49;UBERON:0003076,7.81e-13,12;UBERON:0003057,7.81e-13,12;UBERON:0000369,3.57e-11,5;UBERON:0002435,3.57e-11,5;UBERON:0000204,3.57e-11,5;UBERON:0010082,3.57e-11,5;UBERON:0000025,7.24e-11,114;UBERON:0004111,7.41e-10,122;UBERON:0004733,2.56e-09,6;UBERON:0004732,2.56e-09,6;UBERON:0002028,2.56e-09,6;UBERON:0007277,2.56e-09,6;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0011216,1.48e-07,194;UBERON:0002950,1.67e-07,4;UBERON:0001891,1.67e-07,4;UBERON:0009616,1.67e-07,4;UBERON:0010286,1.67e-07,4;UBERON:0001954,1.71e-07,7;UBERON:0003022,1.71e-07,7;UBERON:0002421,1.71e-07,7;UBERON:0000349,1.71e-07,7;UBERON:0002600,1.71e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0,0,2.07379224616955,2.97013064329719,0.841299845405528,1.14260393761521,0.220868540951614,2.08234358665422,1.15014565221884,1.83843757322004,0,1.27687338085188,1.99688493233117,1.97829431595291,3.20206752608434,1.56274011167028,1.11673199600552,0,1.06958773443767,0.294628585473668,0.427115042397309,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0,0.304465478312141,0,0.60289056221049,0,0.251333182659351,0,0,0,0,0,0,0,5.85561594023094,1.67557365450764,0,0,0,0,2.69623150928681,0.457500602818626,2.63874139437015,0.521472960576829,0.511430914660661,1.24672826735736,1.62241263067758,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.476255494059295,0.12811372028485,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0.643011105094777,0.709360934569094,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0,0,0.463537303779422,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0,0,0 | |||
|short_description=p7@Shank1 | |||
}} |
Revision as of 06:09, 5 August 2015
Short description: | p7@Shank1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Shank1_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | -328bp_to_ENSMUST00000134470_5end |
EntrezGene: | 243961 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.70e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-28 | 23 |
neuron | 6.00e-19 | 33 |
neuronal stem cell | 6.00e-19 | 33 |
neuroblast | 6.00e-19 | 33 |
electrically signaling cell | 6.00e-19 | 33 |
electrically responsive cell | 1.44e-15 | 39 |
electrically active cell | 1.44e-15 | 39 |
neural cell | 7.71e-14 | 43 |
neuron of cerebral cortex | 8.01e-14 | 6 |
ectodermal cell | 1.86e-13 | 44 |
neurectodermal cell | 1.86e-13 | 44 |
striatum neuron | 9.60e-11 | 3 |
hippocampal neuron | 2.71e-10 | 3 |
embryonic cell | 2.37e-07 | 70 |