FFCP PHASE1:Mm9::chr7:20437373..20437394,+: Difference between revisions
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{{FFCP|EntrezGene=100502736|HGNC=|MCL_coexpression_id=87|UniProt=G3UYD9|association_with_transcript=21bp_to_ENSMUST00000172815,uc009fnl.1_5end|description=CAGE_peak_2_at_Gm19345_5end|id=chr7:20437373..20437394,+|ontology_enrichment_celltype=CL:0000117!2.33e-21!23;CL:0000337!2.33e-21!23;CL:0000540!6.70e-20!33;CL:0000047!6.70e-20!33;CL:0000031!6.70e-20!33;CL:0000404!6.70e-20!33;CL:0000393!5.20e-15!39;CL:0000211!5.20e-15!39;CL:0000221!1.07e-14!44;CL:0000133!1.07e-14!44;CL:0002319!2.92e-14!43;CL:0000055!1.16e-10!50;CL:0002321!6.14e-08!70;CL:0000220!6.14e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-45,23;CL:0000337,6.12e-45,23;CL:0000540,6.29e-30,33;CL:0000047,6.29e-30,33;CL:0000031,6.29e-30,33;CL:0000404,6.29e-30,33;CL:0000393,1.29e-24,39;CL:0000211,1.29e-24,39;CL:0002319,6.77e-22,43;CL:0000221,2.71e-21,44;CL:0000133,2.71e-21,44;CL:0002321,1.10e-11,70;CL:0002613,1.17e-09,3;CL:0000120,1.34e-09,3;CL:0002612,1.52e-09,3;CL:0002614,5.03e-09,3;CL:0002610,2.16e-08,3;CL:0000723,5.92e-08,91;CL:0000048,5.92e-08,91;CL:0000034,3.44e-07,97;CL:0002611,8.69e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.07e-26!73;UBERON:0005743!9.07e-26!73;UBERON:0000073!2.12e-25!75;UBERON:0001016!2.12e-25!75;UBERON:0004121!3.76e-22!102;UBERON:0000924!3.76e-22!102;UBERON:0006601!3.76e-22!102;UBERON:0001049!1.32e-20!52;UBERON:0005068!1.32e-20!52;UBERON:0006241!1.32e-20!52;UBERON:0007135!1.32e-20!52;UBERON:0000033!3.31e-19!63;UBERON:0000955!2.19e-18!50;UBERON:0006238!2.19e-18!50;UBERON:0002346!6.64e-18!71;UBERON:0003075!6.64e-18!71;UBERON:0007284!6.64e-18!71;UBERON:0002616!8.51e-18!49;UBERON:0003056!7.48e-14!49;UBERON:0002020!9.38e-14!34;UBERON:0003080!1.21e-13!40;UBERON:0002780!6.11e-13!39;UBERON:0001890!6.11e-13!39;UBERON:0006240!6.11e-13!39;UBERON:0007811!8.14e-10!86;UBERON:0002791!1.28e-09!29;UBERON:0003528!1.28e-09!29;UBERON:0001893!1.28e-09!29;UBERON:0000153!7.20e-09!94;UBERON:0003076!5.61e-08!12;UBERON:0003057!5.61e-08!12;UBERON:0002240!5.02e-07!6;UBERON:0005174!5.02e-07!6;UBERON:0001137!5.02e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.23e-31,54;UBERON:0001017,3.38e-30,73;UBERON:0001016,3.13e-29,75;UBERON:0001049,2.12e-27,52;UBERON:0005068,2.12e-27,52;UBERON:0006241,2.12e-27,52;UBERON:0007135,2.12e-27,52;UBERON:0004121,8.59e-22,95;UBERON:0000924,8.59e-22,95;UBERON:0006601,8.59e-22,95;UBERON:0002346,3.03e-21,64;UBERON:0003075,3.03e-21,64;UBERON:0007284,3.03e-21,64;UBERON:0003076,3.36e-21,12;UBERON:0003057,3.36e-21,12;UBERON:0002020,6.76e-20,34;UBERON:0010371,5.90e-18,73;UBERON:0002420,7.28e-17,8;UBERON:0007245,7.28e-17,8;UBERON:0010009,7.28e-17,8;UBERON:0010011,7.28e-17,8;UBERON:0000454,7.28e-17,8;UBERON:0002616,9.69e-17,46;UBERON:0002240,1.08e-16,6;UBERON:0005174,1.08e-16,6;UBERON:0001137,1.08e-16,6;UBERON:0000955,2.71e-16,47;UBERON:0006238,2.71e-16,47;UBERON:0001948,1.04e-14,5;UBERON:0002315,1.04e-14,5;UBERON:0010314,4.01e-13,92;UBERON:0003080,7.99e-12,40;UBERON:0002950,4.49e-11,4;UBERON:0001891,4.49e-11,4;UBERON:0009616,4.49e-11,4;UBERON:0010286,4.49e-11,4;UBERON:0003528,5.33e-11,29;UBERON:0002791,5.33e-11,29;UBERON:0001893,5.33e-11,29;UBERON:0002780,1.43e-10,39;UBERON:0001890,1.43e-10,39;UBERON:0006240,1.43e-10,39;UBERON:0000369,1.31e-09,5;UBERON:0002435,1.31e-09,5;UBERON:0000204,1.31e-09,5;UBERON:0010082,1.31e-09,5;UBERON:0002257,1.52e-09,3;UBERON:0000025,1.53e-09,114;UBERON:0003056,4.62e-09,49;UBERON:0002038,5.03e-09,3;UBERON:0009663,5.03e-09,3;UBERON:0009661,5.03e-09,3;UBERON:0000125,5.03e-09,3;UBERON:0002308,5.03e-09,3;UBERON:0004111,1.46e-08,122;UBERON:0004684,2.16e-08,3;UBERON:0002275,2.16e-08,3;UBERON:0011216,1.86e-07,194;UBERON:0004733,3.88e-07,6;UBERON:0004732,3.88e-07,6;UBERON:0002028,3.88e-07,6;UBERON:0007277,3.88e-07,6;UBERON:0002256,8.69e-07,2|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,7.40587370980846,4.43681982454325,0,0,0,0,0,0.299600110518405,0,0.414758449233911,1.21505344498522,0.841299845405528,3.71346279724945,3.53389665522582,1.10241719293459,0.575072826109418,1.83843757322004,1.10115880999389,3.31987079021488,1.68967186581868,3.82470234417562,5.39777097254217,3.64639359389732,4.4669279840221,1.68828783009504,1.98637722109853,5.30331453852602,3.70166370077668,3.54158947068071,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,1.19832511523858,0,1.88481528169297,0.347648640384553,0,1.45451631191692,0.811206315338788,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.408218994907967,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100502736 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UYD9 | |||
|association_with_transcript=21bp_to_ENSMUST00000172815,uc009fnl.1_5end | |||
|cluster_id=chr7:20437373..20437394,+ | |||
|description=CAGE_peak_2_at_Gm19345_5end | |||
|id=chr7:20437373..20437394,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.33e-21!23;CL:0000337!2.33e-21!23;CL:0000540!6.70e-20!33;CL:0000047!6.70e-20!33;CL:0000031!6.70e-20!33;CL:0000404!6.70e-20!33;CL:0000393!5.20e-15!39;CL:0000211!5.20e-15!39;CL:0000221!1.07e-14!44;CL:0000133!1.07e-14!44;CL:0002319!2.92e-14!43;CL:0000055!1.16e-10!50;CL:0002321!6.14e-08!70;CL:0000220!6.14e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-45,23;CL:0000337,6.12e-45,23;CL:0000540,6.29e-30,33;CL:0000047,6.29e-30,33;CL:0000031,6.29e-30,33;CL:0000404,6.29e-30,33;CL:0000393,1.29e-24,39;CL:0000211,1.29e-24,39;CL:0002319,6.77e-22,43;CL:0000221,2.71e-21,44;CL:0000133,2.71e-21,44;CL:0002321,1.10e-11,70;CL:0002613,1.17e-09,3;CL:0000120,1.34e-09,3;CL:0002612,1.52e-09,3;CL:0002614,5.03e-09,3;CL:0002610,2.16e-08,3;CL:0000723,5.92e-08,91;CL:0000048,5.92e-08,91;CL:0000034,3.44e-07,97;CL:0002611,8.69e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.07e-26!73;UBERON:0005743!9.07e-26!73;UBERON:0000073!2.12e-25!75;UBERON:0001016!2.12e-25!75;UBERON:0004121!3.76e-22!102;UBERON:0000924!3.76e-22!102;UBERON:0006601!3.76e-22!102;UBERON:0001049!1.32e-20!52;UBERON:0005068!1.32e-20!52;UBERON:0006241!1.32e-20!52;UBERON:0007135!1.32e-20!52;UBERON:0000033!3.31e-19!63;UBERON:0000955!2.19e-18!50;UBERON:0006238!2.19e-18!50;UBERON:0002346!6.64e-18!71;UBERON:0003075!6.64e-18!71;UBERON:0007284!6.64e-18!71;UBERON:0002616!8.51e-18!49;UBERON:0003056!7.48e-14!49;UBERON:0002020!9.38e-14!34;UBERON:0003080!1.21e-13!40;UBERON:0002780!6.11e-13!39;UBERON:0001890!6.11e-13!39;UBERON:0006240!6.11e-13!39;UBERON:0007811!8.14e-10!86;UBERON:0002791!1.28e-09!29;UBERON:0003528!1.28e-09!29;UBERON:0001893!1.28e-09!29;UBERON:0000153!7.20e-09!94;UBERON:0003076!5.61e-08!12;UBERON:0003057!5.61e-08!12;UBERON:0002240!5.02e-07!6;UBERON:0005174!5.02e-07!6;UBERON:0001137!5.02e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.23e-31,54;UBERON:0001017,3.38e-30,73;UBERON:0001016,3.13e-29,75;UBERON:0001049,2.12e-27,52;UBERON:0005068,2.12e-27,52;UBERON:0006241,2.12e-27,52;UBERON:0007135,2.12e-27,52;UBERON:0004121,8.59e-22,95;UBERON:0000924,8.59e-22,95;UBERON:0006601,8.59e-22,95;UBERON:0002346,3.03e-21,64;UBERON:0003075,3.03e-21,64;UBERON:0007284,3.03e-21,64;UBERON:0003076,3.36e-21,12;UBERON:0003057,3.36e-21,12;UBERON:0002020,6.76e-20,34;UBERON:0010371,5.90e-18,73;UBERON:0002420,7.28e-17,8;UBERON:0007245,7.28e-17,8;UBERON:0010009,7.28e-17,8;UBERON:0010011,7.28e-17,8;UBERON:0000454,7.28e-17,8;UBERON:0002616,9.69e-17,46;UBERON:0002240,1.08e-16,6;UBERON:0005174,1.08e-16,6;UBERON:0001137,1.08e-16,6;UBERON:0000955,2.71e-16,47;UBERON:0006238,2.71e-16,47;UBERON:0001948,1.04e-14,5;UBERON:0002315,1.04e-14,5;UBERON:0010314,4.01e-13,92;UBERON:0003080,7.99e-12,40;UBERON:0002950,4.49e-11,4;UBERON:0001891,4.49e-11,4;UBERON:0009616,4.49e-11,4;UBERON:0010286,4.49e-11,4;UBERON:0003528,5.33e-11,29;UBERON:0002791,5.33e-11,29;UBERON:0001893,5.33e-11,29;UBERON:0002780,1.43e-10,39;UBERON:0001890,1.43e-10,39;UBERON:0006240,1.43e-10,39;UBERON:0000369,1.31e-09,5;UBERON:0002435,1.31e-09,5;UBERON:0000204,1.31e-09,5;UBERON:0010082,1.31e-09,5;UBERON:0002257,1.52e-09,3;UBERON:0000025,1.53e-09,114;UBERON:0003056,4.62e-09,49;UBERON:0002038,5.03e-09,3;UBERON:0009663,5.03e-09,3;UBERON:0009661,5.03e-09,3;UBERON:0000125,5.03e-09,3;UBERON:0002308,5.03e-09,3;UBERON:0004111,1.46e-08,122;UBERON:0004684,2.16e-08,3;UBERON:0002275,2.16e-08,3;UBERON:0011216,1.86e-07,194;UBERON:0004733,3.88e-07,6;UBERON:0004732,3.88e-07,6;UBERON:0002028,3.88e-07,6;UBERON:0007277,3.88e-07,6;UBERON:0002256,8.69e-07,2 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,7.40587370980846,4.43681982454325,0,0,0,0,0,0.299600110518405,0,0.414758449233911,1.21505344498522,0.841299845405528,3.71346279724945,3.53389665522582,1.10241719293459,0.575072826109418,1.83843757322004,1.10115880999389,3.31987079021488,1.68967186581868,3.82470234417562,5.39777097254217,3.64639359389732,4.4669279840221,1.68828783009504,1.98637722109853,5.30331453852602,3.70166370077668,3.54158947068071,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,1.19832511523858,0,1.88481528169297,0.347648640384553,0,1.45451631191692,0.811206315338788,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.408218994907967,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.46144541843627,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,1.03135543248187,0.680879211507576,0,0,0.643011105094777,0.532020700926821,0.356737635204141,0.493647061806363,2.13125464380219,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.328281799490123,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.428736758158132,0,1.12950368523413,0,0,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.729320151204882,0.628839487883947,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0,0.760437899670719,0.754505365544305,0.280924522409647,0.640251524048693,0.516919220600519,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.238436189947321,0.726732083161643,0.376437521661322,0.676916863133412,0.73171189149109,0.526139422875686,0.407412341537585,1.68342681497322,0.474540072496697,0.29551344712669,0.409231043169689,0.464810523557898,0,1.24905288968973,0,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p2@Gm19345 | |||
}} |
Revision as of 18:41, 4 August 2015
Short description: | p2@Gm19345 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm19345_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 21bp_to_ENSMUST00000172815, uc009fnl.1_5end |
EntrezGene: | 100502736 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.12e-45 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-45 | 23 |
neuron | 6.29e-30 | 33 |
neuronal stem cell | 6.29e-30 | 33 |
neuroblast | 6.29e-30 | 33 |
electrically signaling cell | 6.29e-30 | 33 |
electrically responsive cell | 1.29e-24 | 39 |
electrically active cell | 1.29e-24 | 39 |
neural cell | 6.77e-22 | 43 |
ectodermal cell | 2.71e-21 | 44 |
neurectodermal cell | 2.71e-21 | 44 |
embryonic cell | 1.10e-11 | 70 |
striatum neuron | 1.17e-09 | 3 |
granule cell | 1.34e-09 | 3 |
neuron of the ventral spinal cord | 1.52e-09 | 3 |
neuron of the substantia nigra | 5.03e-09 | 3 |
raphe nuclei neuron | 2.16e-08 | 3 |
somatic stem cell | 5.92e-08 | 91 |
multi fate stem cell | 5.92e-08 | 91 |
stem cell | 3.44e-07 | 97 |
neuron of the dorsal spinal cord | 8.69e-07 | 2 |