FFCP PHASE1:Mm9::chr7:20437343..20437371,+: Difference between revisions
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{{FFCP|EntrezGene=100502736|HGNC=|MCL_coexpression_id=87|UniProt=G3UYD9|association_with_transcript=0bp_to_ENSMUST00000172815,uc009fnl.1_5end|description=CAGE_peak_1_at_Gm19345_5end|id=chr7:20437343..20437371,+|ontology_enrichment_celltype=CL:0000117!9.16e-22!23;CL:0000337!9.16e-22!23;CL:0000540!1.60e-16!33;CL:0000047!1.60e-16!33;CL:0000031!1.60e-16!33;CL:0000404!1.60e-16!33;CL:0000393!2.11e-12!39;CL:0000211!2.11e-12!39;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0002319!2.41e-10!43;CL:0000055!1.26e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.13e-37,23;CL:0000337,9.13e-37,23;CL:0000540,4.85e-24,33;CL:0000047,4.85e-24,33;CL:0000031,4.85e-24,33;CL:0000404,4.85e-24,33;CL:0000393,1.52e-19,39;CL:0000211,1.52e-19,39;CL:0002319,3.00e-17,43;CL:0000221,9.68e-17,44;CL:0000133,9.68e-17,44;CL:0002321,1.12e-08,70;CL:0002613,2.39e-08,3;CL:0002612,2.97e-08,3;CL:0000120,1.42e-07,3;CL:0002610,1.65e-07,3;CL:0002614,2.24e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.08e-24!73;UBERON:0005743!1.08e-24!73;UBERON:0001049!4.35e-24!52;UBERON:0005068!4.35e-24!52;UBERON:0006241!4.35e-24!52;UBERON:0007135!4.35e-24!52;UBERON:0000073!1.65e-23!75;UBERON:0001016!1.65e-23!75;UBERON:0000955!2.45e-21!50;UBERON:0006238!2.45e-21!50;UBERON:0002346!2.66e-21!71;UBERON:0003075!2.66e-21!71;UBERON:0007284!2.66e-21!71;UBERON:0000033!4.13e-21!63;UBERON:0002616!6.01e-21!49;UBERON:0004121!7.58e-21!102;UBERON:0000924!7.58e-21!102;UBERON:0006601!7.58e-21!102;UBERON:0002020!2.81e-20!34;UBERON:0003056!6.61e-17!49;UBERON:0003080!1.62e-16!40;UBERON:0002780!1.16e-15!39;UBERON:0001890!1.16e-15!39;UBERON:0006240!1.16e-15!39;UBERON:0002791!2.56e-15!29;UBERON:0003528!2.56e-15!29;UBERON:0001893!2.56e-15!29;UBERON:0007811!3.65e-11!86;UBERON:0000153!5.62e-09!94;UBERON:0002420!8.39e-09!8;UBERON:0007245!8.39e-09!8;UBERON:0010009!8.39e-09!8;UBERON:0010011!8.39e-09!8;UBERON:0000454!8.39e-09!8;UBERON:0000956!1.44e-08!21;UBERON:0001869!1.44e-08!21;UBERON:0000203!1.44e-08!21;UBERON:0003076!2.56e-08!12;UBERON:0003057!2.56e-08!12;UBERON:0002240!1.74e-07!6;UBERON:0005174!1.74e-07!6;UBERON:0001137!1.74e-07!6;UBERON:0002298!6.87e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.89e-29,54;UBERON:0001017,3.98e-27,73;UBERON:0001016,3.37e-26,75;UBERON:0001049,7.89e-26,52;UBERON:0005068,7.89e-26,52;UBERON:0006241,7.89e-26,52;UBERON:0007135,7.89e-26,52;UBERON:0002020,4.49e-20,34;UBERON:0002346,9.71e-20,64;UBERON:0003075,9.71e-20,64;UBERON:0007284,9.71e-20,64;UBERON:0004121,4.59e-19,95;UBERON:0000924,4.59e-19,95;UBERON:0006601,4.59e-19,95;UBERON:0003076,6.86e-18,12;UBERON:0003057,6.86e-18,12;UBERON:0010371,1.72e-16,73;UBERON:0002616,3.13e-16,46;UBERON:0000955,8.93e-16,47;UBERON:0006238,8.93e-16,47;UBERON:0002240,9.90e-15,6;UBERON:0005174,9.90e-15,6;UBERON:0001137,9.90e-15,6;UBERON:0002420,4.01e-14,8;UBERON:0007245,4.01e-14,8;UBERON:0010009,4.01e-14,8;UBERON:0010011,4.01e-14,8;UBERON:0000454,4.01e-14,8;UBERON:0001948,8.57e-13,5;UBERON:0002315,8.57e-13,5;UBERON:0003080,3.99e-12,40;UBERON:0003528,7.01e-12,29;UBERON:0002791,7.01e-12,29;UBERON:0001893,7.01e-12,29;UBERON:0010314,9.84e-12,92;UBERON:0002780,7.07e-11,39;UBERON:0001890,7.07e-11,39;UBERON:0006240,7.07e-11,39;UBERON:0002950,2.17e-09,4;UBERON:0001891,2.17e-09,4;UBERON:0009616,2.17e-09,4;UBERON:0010286,2.17e-09,4;UBERON:0003056,3.66e-09,49;UBERON:0000369,2.03e-08,5;UBERON:0002435,2.03e-08,5;UBERON:0000204,2.03e-08,5;UBERON:0010082,2.03e-08,5;UBERON:0002257,2.97e-08,3;UBERON:0000025,3.09e-08,114;UBERON:0004684,1.65e-07,3;UBERON:0002275,1.65e-07,3;UBERON:0002038,2.24e-07,3;UBERON:0009663,2.24e-07,3;UBERON:0009661,2.24e-07,3;UBERON:0000125,2.24e-07,3;UBERON:0002308,2.24e-07,3;UBERON:0004111,2.76e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.420649922702764,6.28432165688368,7.73039893330647,1.10241719293459,2.01275489138296,1.83843757322004,2.20231761998777,4.08599481872601,2.4577045320999,4.48413378282659,6.77008562657831,8.33461392890816,4.4669279840221,2.25105044012672,1.83357897332172,7.36571463684169,4.9830088279686,5.21918448310842,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,2.84602214869163,0.915001205637253,6.28271760564322,0.869121600961382,0.767146371990992,2.28566849015516,2.10913641988085,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.340182495756639,0.768682321709099,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100502736 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UYD9 | |||
|association_with_transcript=0bp_to_ENSMUST00000172815,uc009fnl.1_5end | |||
|cluster_id=chr7:20437343..20437371,+ | |||
|description=CAGE_peak_1_at_Gm19345_5end | |||
|id=chr7:20437343..20437371,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.16e-22!23;CL:0000337!9.16e-22!23;CL:0000540!1.60e-16!33;CL:0000047!1.60e-16!33;CL:0000031!1.60e-16!33;CL:0000404!1.60e-16!33;CL:0000393!2.11e-12!39;CL:0000211!2.11e-12!39;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0002319!2.41e-10!43;CL:0000055!1.26e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.13e-37,23;CL:0000337,9.13e-37,23;CL:0000540,4.85e-24,33;CL:0000047,4.85e-24,33;CL:0000031,4.85e-24,33;CL:0000404,4.85e-24,33;CL:0000393,1.52e-19,39;CL:0000211,1.52e-19,39;CL:0002319,3.00e-17,43;CL:0000221,9.68e-17,44;CL:0000133,9.68e-17,44;CL:0002321,1.12e-08,70;CL:0002613,2.39e-08,3;CL:0002612,2.97e-08,3;CL:0000120,1.42e-07,3;CL:0002610,1.65e-07,3;CL:0002614,2.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-24!73;UBERON:0005743!1.08e-24!73;UBERON:0001049!4.35e-24!52;UBERON:0005068!4.35e-24!52;UBERON:0006241!4.35e-24!52;UBERON:0007135!4.35e-24!52;UBERON:0000073!1.65e-23!75;UBERON:0001016!1.65e-23!75;UBERON:0000955!2.45e-21!50;UBERON:0006238!2.45e-21!50;UBERON:0002346!2.66e-21!71;UBERON:0003075!2.66e-21!71;UBERON:0007284!2.66e-21!71;UBERON:0000033!4.13e-21!63;UBERON:0002616!6.01e-21!49;UBERON:0004121!7.58e-21!102;UBERON:0000924!7.58e-21!102;UBERON:0006601!7.58e-21!102;UBERON:0002020!2.81e-20!34;UBERON:0003056!6.61e-17!49;UBERON:0003080!1.62e-16!40;UBERON:0002780!1.16e-15!39;UBERON:0001890!1.16e-15!39;UBERON:0006240!1.16e-15!39;UBERON:0002791!2.56e-15!29;UBERON:0003528!2.56e-15!29;UBERON:0001893!2.56e-15!29;UBERON:0007811!3.65e-11!86;UBERON:0000153!5.62e-09!94;UBERON:0002420!8.39e-09!8;UBERON:0007245!8.39e-09!8;UBERON:0010009!8.39e-09!8;UBERON:0010011!8.39e-09!8;UBERON:0000454!8.39e-09!8;UBERON:0000956!1.44e-08!21;UBERON:0001869!1.44e-08!21;UBERON:0000203!1.44e-08!21;UBERON:0003076!2.56e-08!12;UBERON:0003057!2.56e-08!12;UBERON:0002240!1.74e-07!6;UBERON:0005174!1.74e-07!6;UBERON:0001137!1.74e-07!6;UBERON:0002298!6.87e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.89e-29,54;UBERON:0001017,3.98e-27,73;UBERON:0001016,3.37e-26,75;UBERON:0001049,7.89e-26,52;UBERON:0005068,7.89e-26,52;UBERON:0006241,7.89e-26,52;UBERON:0007135,7.89e-26,52;UBERON:0002020,4.49e-20,34;UBERON:0002346,9.71e-20,64;UBERON:0003075,9.71e-20,64;UBERON:0007284,9.71e-20,64;UBERON:0004121,4.59e-19,95;UBERON:0000924,4.59e-19,95;UBERON:0006601,4.59e-19,95;UBERON:0003076,6.86e-18,12;UBERON:0003057,6.86e-18,12;UBERON:0010371,1.72e-16,73;UBERON:0002616,3.13e-16,46;UBERON:0000955,8.93e-16,47;UBERON:0006238,8.93e-16,47;UBERON:0002240,9.90e-15,6;UBERON:0005174,9.90e-15,6;UBERON:0001137,9.90e-15,6;UBERON:0002420,4.01e-14,8;UBERON:0007245,4.01e-14,8;UBERON:0010009,4.01e-14,8;UBERON:0010011,4.01e-14,8;UBERON:0000454,4.01e-14,8;UBERON:0001948,8.57e-13,5;UBERON:0002315,8.57e-13,5;UBERON:0003080,3.99e-12,40;UBERON:0003528,7.01e-12,29;UBERON:0002791,7.01e-12,29;UBERON:0001893,7.01e-12,29;UBERON:0010314,9.84e-12,92;UBERON:0002780,7.07e-11,39;UBERON:0001890,7.07e-11,39;UBERON:0006240,7.07e-11,39;UBERON:0002950,2.17e-09,4;UBERON:0001891,2.17e-09,4;UBERON:0009616,2.17e-09,4;UBERON:0010286,2.17e-09,4;UBERON:0003056,3.66e-09,49;UBERON:0000369,2.03e-08,5;UBERON:0002435,2.03e-08,5;UBERON:0000204,2.03e-08,5;UBERON:0010082,2.03e-08,5;UBERON:0002257,2.97e-08,3;UBERON:0000025,3.09e-08,114;UBERON:0004684,1.65e-07,3;UBERON:0002275,1.65e-07,3;UBERON:0002038,2.24e-07,3;UBERON:0009663,2.24e-07,3;UBERON:0009661,2.24e-07,3;UBERON:0000125,2.24e-07,3;UBERON:0002308,2.24e-07,3;UBERON:0004111,2.76e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.420649922702764,6.28432165688368,7.73039893330647,1.10241719293459,2.01275489138296,1.83843757322004,2.20231761998777,4.08599481872601,2.4577045320999,4.48413378282659,6.77008562657831,8.33461392890816,4.4669279840221,2.25105044012672,1.83357897332172,7.36571463684169,4.9830088279686,5.21918448310842,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,2.84602214869163,0.915001205637253,6.28271760564322,0.869121600961382,0.767146371990992,2.28566849015516,2.10913641988085,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.340182495756639,0.768682321709099,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,2.81308047821288,0,0,0,0,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.532020700926821,0.356737635204141,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,1.20297227640581,0,0.755393897389701,0.675022500231806,0.45032120322422,1.81256963593682,1.03552062350364,0,0.399024873401031,0,0.486213434136588,0.209613162627982,0.367687016900028,1.77797382241292,1.23621034343337,0.962757628775446,1.76888048234658,1.2673964994512,0.565879024158229,0.749132059759059,0.89635213366817,0.574354689556133,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.588795680537589,1.37147700954166,0.887379030796687,0.476872379894642,0.726732083161643,1.03520318456864,0.507687647350059,0.365855945745545,0.526139422875686,1.08643291076689,0,0.355905054372522,0.591026894253381,1.22769312950907,0.77468420592983,0,1.24905288968973,0.935726433781634,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p1@Gm19345 | |||
}} |
Revision as of 18:41, 4 August 2015
Short description: | p1@Gm19345 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm19345_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000172815, uc009fnl.1_5end |
EntrezGene: | 100502736 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.13e-37 | 23 |
neuroblast (sensu Vertebrata) | 9.13e-37 | 23 |
neuron | 4.85e-24 | 33 |
neuronal stem cell | 4.85e-24 | 33 |
neuroblast | 4.85e-24 | 33 |
electrically signaling cell | 4.85e-24 | 33 |
electrically responsive cell | 1.52e-19 | 39 |
electrically active cell | 1.52e-19 | 39 |
neural cell | 3.00e-17 | 43 |
ectodermal cell | 9.68e-17 | 44 |
neurectodermal cell | 9.68e-17 | 44 |
embryonic cell | 1.12e-08 | 70 |
striatum neuron | 2.39e-08 | 3 |
neuron of the ventral spinal cord | 2.97e-08 | 3 |
granule cell | 1.42e-07 | 3 |
raphe nuclei neuron | 1.65e-07 | 3 |
neuron of the substantia nigra | 2.24e-07 | 3 |