FFCP PHASE1:Mm9::chr7:149280994..149281003,-: Difference between revisions
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{{FFCP|EntrezGene=18218|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=-47bp_to_uc009kmo.1_5end|description=CAGE_peak_4_at_Dusp8_5end|id=chr7:149280994..149281003,-|ontology_enrichment_celltype=CL:0000117!4.83e-15!23;CL:0000337!4.83e-15!23;CL:0000540!1.47e-10!33;CL:0000047!1.47e-10!33;CL:0000031!1.47e-10!33;CL:0000404!1.47e-10!33;CL:0002319!7.40e-09!43;CL:0000221!9.84e-09!44;CL:0000133!9.84e-09!44;CL:0000393!5.37e-07!39;CL:0000211!5.37e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-27,23;CL:0000337,1.92e-27,23;CL:0000540,4.25e-17,33;CL:0000047,4.25e-17,33;CL:0000031,4.25e-17,33;CL:0000404,4.25e-17,33;CL:0000393,1.78e-13,39;CL:0000211,1.78e-13,39;CL:0002319,8.51e-13,43;CL:0000221,2.34e-12,44;CL:0000133,2.34e-12,44;CL:0002321,5.42e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.18e-22!34;UBERON:0001017!4.00e-20!73;UBERON:0005743!4.00e-20!73;UBERON:0001049!5.47e-20!52;UBERON:0005068!5.47e-20!52;UBERON:0006241!5.47e-20!52;UBERON:0007135!5.47e-20!52;UBERON:0000073!3.14e-19!75;UBERON:0001016!3.14e-19!75;UBERON:0002791!8.75e-19!29;UBERON:0003528!8.75e-19!29;UBERON:0001893!8.75e-19!29;UBERON:0002346!1.42e-18!71;UBERON:0003075!1.42e-18!71;UBERON:0007284!1.42e-18!71;UBERON:0000955!3.82e-18!50;UBERON:0006238!3.82e-18!50;UBERON:0002616!1.56e-17!49;UBERON:0004121!5.38e-17!102;UBERON:0000924!5.38e-17!102;UBERON:0006601!5.38e-17!102;UBERON:0000033!7.55e-16!63;UBERON:0003080!1.16e-14!40;UBERON:0003056!1.56e-14!49;UBERON:0002780!4.09e-14!39;UBERON:0001890!4.09e-14!39;UBERON:0006240!4.09e-14!39;UBERON:0000956!1.47e-13!21;UBERON:0001869!1.47e-13!21;UBERON:0000203!1.47e-13!21;UBERON:0002619!1.31e-11!17;UBERON:0002021!4.08e-08!10;UBERON:0000411!4.08e-08!10;UBERON:0001950!4.08e-08!10;UBERON:0000025!5.74e-08!114;UBERON:0004111!5.11e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.79e-40,54;UBERON:0002020,4.65e-39,34;UBERON:0001049,2.25e-37,52;UBERON:0005068,2.25e-37,52;UBERON:0006241,2.25e-37,52;UBERON:0007135,2.25e-37,52;UBERON:0001017,9.93e-37,73;UBERON:0001016,2.13e-35,75;UBERON:0002346,4.02e-33,64;UBERON:0003075,4.02e-33,64;UBERON:0007284,4.02e-33,64;UBERON:0003528,3.52e-31,29;UBERON:0002791,3.52e-31,29;UBERON:0001893,3.52e-31,29;UBERON:0000955,3.31e-30,47;UBERON:0006238,3.31e-30,47;UBERON:0004121,3.55e-29,95;UBERON:0000924,3.55e-29,95;UBERON:0006601,3.55e-29,95;UBERON:0002616,5.52e-29,46;UBERON:0010371,1.53e-27,73;UBERON:0003080,2.44e-26,40;UBERON:0002780,3.17e-25,39;UBERON:0001890,3.17e-25,39;UBERON:0006240,3.17e-25,39;UBERON:0003056,1.65e-24,49;UBERON:0000956,1.50e-20,21;UBERON:0001869,1.50e-20,21;UBERON:0000203,1.50e-20,21;UBERON:0010314,1.82e-20,92;UBERON:0002619,1.89e-18,17;UBERON:0002021,3.34e-15,10;UBERON:0000411,3.34e-15,10;UBERON:0001950,3.34e-15,10;UBERON:0000025,1.68e-12,114;UBERON:0002420,1.03e-11,8;UBERON:0007245,1.03e-11,8;UBERON:0010009,1.03e-11,8;UBERON:0010011,1.03e-11,8;UBERON:0000454,1.03e-11,8;UBERON:0003076,4.12e-11,12;UBERON:0003057,4.12e-11,12;UBERON:0004111,5.94e-11,122;UBERON:0002240,9.18e-10,6;UBERON:0005174,9.18e-10,6;UBERON:0001137,9.18e-10,6;UBERON:0011216,3.20e-09,194;UBERON:0001948,5.92e-09,5;UBERON:0002315,5.92e-09,5;UBERON:0000369,8.18e-09,5;UBERON:0002435,8.18e-09,5;UBERON:0000204,8.18e-09,5;UBERON:0010082,8.18e-09,5;UBERON:0000483,4.84e-08,174;UBERON:0000119,8.19e-08,176|phase1_expression=0,1.04692622291808,1.36499771816861,1.20985684522732,1.00179145989269,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,3.49780939064073,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0,0.430761996159075,0.430942465371778,0,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.777719596297134,0,0,0,0,0,0,0,0,5.26022798234954,3.1739458756322,1.90149421051854,0,0,0,0,0,0.299600110518405,1.15265491596466,2.7996195323289,2.16009501330705,0.841299845405528,4.57041575046086,4.41737081903227,2.44981598429908,1.43768206527355,5.51531271966013,1.10115880999389,2.42605942361857,3.22573719838111,3.69281605644543,3.93396867490361,3.64639359389732,2.79182999001381,1.12552522006336,2.29197371665215,3.83017161115768,4.41352210477219,5.21918448310842,0,0.0755715601067855,0.579728977403356,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.60289056221049,0.470354828542819,0,0.247194967734374,0,0,1.13236794963186,0.662524555381181,0.484875253135222,0,2.04946557908083,3.14170060220183,0,0.239630249011841,0,0,2.39665023047716,5.49000723382352,5.40313714085317,2.60736480288415,2.30143911597297,3.74018480207208,3.24482526135515,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0.30140963567143,0.340182495756639,1.0249097622788,1.03071897015702,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18218 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_uc009kmo.1_5end | |||
|cluster_id=chr7:149280994..149281003,- | |||
|description=CAGE_peak_4_at_Dusp8_5end | |||
|id=chr7:149280994..149281003,- | |||
|ontology_enrichment_celltype=CL:0000117!4.83e-15!23;CL:0000337!4.83e-15!23;CL:0000540!1.47e-10!33;CL:0000047!1.47e-10!33;CL:0000031!1.47e-10!33;CL:0000404!1.47e-10!33;CL:0002319!7.40e-09!43;CL:0000221!9.84e-09!44;CL:0000133!9.84e-09!44;CL:0000393!5.37e-07!39;CL:0000211!5.37e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-27,23;CL:0000337,1.92e-27,23;CL:0000540,4.25e-17,33;CL:0000047,4.25e-17,33;CL:0000031,4.25e-17,33;CL:0000404,4.25e-17,33;CL:0000393,1.78e-13,39;CL:0000211,1.78e-13,39;CL:0002319,8.51e-13,43;CL:0000221,2.34e-12,44;CL:0000133,2.34e-12,44;CL:0002321,5.42e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.18e-22!34;UBERON:0001017!4.00e-20!73;UBERON:0005743!4.00e-20!73;UBERON:0001049!5.47e-20!52;UBERON:0005068!5.47e-20!52;UBERON:0006241!5.47e-20!52;UBERON:0007135!5.47e-20!52;UBERON:0000073!3.14e-19!75;UBERON:0001016!3.14e-19!75;UBERON:0002791!8.75e-19!29;UBERON:0003528!8.75e-19!29;UBERON:0001893!8.75e-19!29;UBERON:0002346!1.42e-18!71;UBERON:0003075!1.42e-18!71;UBERON:0007284!1.42e-18!71;UBERON:0000955!3.82e-18!50;UBERON:0006238!3.82e-18!50;UBERON:0002616!1.56e-17!49;UBERON:0004121!5.38e-17!102;UBERON:0000924!5.38e-17!102;UBERON:0006601!5.38e-17!102;UBERON:0000033!7.55e-16!63;UBERON:0003080!1.16e-14!40;UBERON:0003056!1.56e-14!49;UBERON:0002780!4.09e-14!39;UBERON:0001890!4.09e-14!39;UBERON:0006240!4.09e-14!39;UBERON:0000956!1.47e-13!21;UBERON:0001869!1.47e-13!21;UBERON:0000203!1.47e-13!21;UBERON:0002619!1.31e-11!17;UBERON:0002021!4.08e-08!10;UBERON:0000411!4.08e-08!10;UBERON:0001950!4.08e-08!10;UBERON:0000025!5.74e-08!114;UBERON:0004111!5.11e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.79e-40,54;UBERON:0002020,4.65e-39,34;UBERON:0001049,2.25e-37,52;UBERON:0005068,2.25e-37,52;UBERON:0006241,2.25e-37,52;UBERON:0007135,2.25e-37,52;UBERON:0001017,9.93e-37,73;UBERON:0001016,2.13e-35,75;UBERON:0002346,4.02e-33,64;UBERON:0003075,4.02e-33,64;UBERON:0007284,4.02e-33,64;UBERON:0003528,3.52e-31,29;UBERON:0002791,3.52e-31,29;UBERON:0001893,3.52e-31,29;UBERON:0000955,3.31e-30,47;UBERON:0006238,3.31e-30,47;UBERON:0004121,3.55e-29,95;UBERON:0000924,3.55e-29,95;UBERON:0006601,3.55e-29,95;UBERON:0002616,5.52e-29,46;UBERON:0010371,1.53e-27,73;UBERON:0003080,2.44e-26,40;UBERON:0002780,3.17e-25,39;UBERON:0001890,3.17e-25,39;UBERON:0006240,3.17e-25,39;UBERON:0003056,1.65e-24,49;UBERON:0000956,1.50e-20,21;UBERON:0001869,1.50e-20,21;UBERON:0000203,1.50e-20,21;UBERON:0010314,1.82e-20,92;UBERON:0002619,1.89e-18,17;UBERON:0002021,3.34e-15,10;UBERON:0000411,3.34e-15,10;UBERON:0001950,3.34e-15,10;UBERON:0000025,1.68e-12,114;UBERON:0002420,1.03e-11,8;UBERON:0007245,1.03e-11,8;UBERON:0010009,1.03e-11,8;UBERON:0010011,1.03e-11,8;UBERON:0000454,1.03e-11,8;UBERON:0003076,4.12e-11,12;UBERON:0003057,4.12e-11,12;UBERON:0004111,5.94e-11,122;UBERON:0002240,9.18e-10,6;UBERON:0005174,9.18e-10,6;UBERON:0001137,9.18e-10,6;UBERON:0011216,3.20e-09,194;UBERON:0001948,5.92e-09,5;UBERON:0002315,5.92e-09,5;UBERON:0000369,8.18e-09,5;UBERON:0002435,8.18e-09,5;UBERON:0000204,8.18e-09,5;UBERON:0010082,8.18e-09,5;UBERON:0000483,4.84e-08,174;UBERON:0000119,8.19e-08,176 | |||
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|short_description=p4@Dusp8 | |||
}} |
Revision as of 13:42, 4 August 2015
Short description: | p4@Dusp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dusp8_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -47bp_to_uc009kmo.1_5end |
EntrezGene: | 18218 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.92e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-27 | 23 |
neuron | 4.25e-17 | 33 |
neuronal stem cell | 4.25e-17 | 33 |
neuroblast | 4.25e-17 | 33 |
electrically signaling cell | 4.25e-17 | 33 |
electrically responsive cell | 1.78e-13 | 39 |
electrically active cell | 1.78e-13 | 39 |
neural cell | 8.51e-13 | 43 |
ectodermal cell | 2.34e-12 | 44 |
neurectodermal cell | 2.34e-12 | 44 |
embryonic cell | 5.42e-09 | 70 |