FFCP PHASE1:Hg19::chrX:46121582..46121588,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chrX:46121582..46121588,- | |||
|id=chrX:46121582..46121588,- | |||
|ontology_enrichment_celltype=CL:0000240!1.48e-10!6;CL:0000311!1.48e-10!6;CL:0000079!1.48e-10!6;CL:0000237!1.48e-10!6;CL:0000036!1.48e-10!6;CL:0000357!1.48e-10!6;CL:0000114!1.48e-10!6;CL:0000066!1.33e-09!254;CL:1001319!7.59e-08!1;CL:1000600!7.59e-08!1;CL:0000313!9.29e-08!1;CL:0002336!9.94e-08!1;CL:0002261!9.94e-08!1;CL:0002170!9.94e-08!1;CL:0000076!2.07e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.14e-10;3!CL:0002577;1.14e-10;3!CL:0002188;5.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.09e-10,3;CL:0000322,1.20e-10,3;CL:0002188,5.70e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.45e-12!14;DOID:305!9.28e-10!106;DOID:3151!2.90e-08!1;DOID:3149!2.90e-08!1;DOID:3111!3.34e-08!1;DOID:3603!3.34e-08!1;DOID:2152!9.29e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.15e-15;2!DOID:3910;2.55e-15;2!DOID:1749;4.29e-09;14!DOID:3908;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.15e-15,2;DOID:3910,2.74e-15,2;DOID:1749,4.38e-09,14;DOID:305,5.34e-07,106;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.74e-13!12;UBERON:0004913!1.65e-08!1;UBERON:0003703!1.65e-08!1;UBERON:0001174!1.65e-08!1;UBERON:0004914!1.65e-08!1;UBERON:0000997!2.19e-08!1;UBERON:0005056!2.19e-08!1;UBERON:0003134!4.91e-08!37;UBERON:0000474!4.91e-08!37;UBERON:0004645!7.59e-08!1;UBERON:0001256!7.59e-08!1;UBERON:0001259!7.59e-08!1;UBERON:0004911!9.29e-08!1;UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1;UBERON:0003100!3.60e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;7.48e-30;1!UBERON:0003703;7.48e-30;1!UBERON:0001174;7.48e-30;1!UBERON:0004914;7.48e-30;1!UBERON:0000997;2.05e-29;1!UBERON:0005056;2.05e-29;1!UBERON:0004176;2.05e-29;1!UBERON:0004903;2.55e-15;2!UBERON:0002173;2.55e-15;2!UBERON:0002186;2.55e-15;2!UBERON:0000058;2.44e-12;10!UBERON:0002114;6.73e-11;2!UBERON:0004821;1.14e-10;3!UBERON:0007499;1.14e-10;3!UBERON:0003215;1.14e-10;3!UBERON:0010368;1.14e-10;3!UBERON:0009911;1.14e-10;3!UBERON:0002299;1.14e-10;3!UBERON:0006524;1.14e-10;3!UBERON:0008874;1.14e-10;3!UBERON:0002169;1.14e-10;3!UBERON:0004894;1.14e-10;3!UBERON:0002394;1.70e-08;4!UBERON:0003928;1.70e-08;4!UBERON:0001987;2.52e-08;4!UBERON:0009856;2.52e-08;4!UBERON:0002108;4.79e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,7.48e-30,1;UBERON:0003703,7.48e-30,1;UBERON:0001174,7.48e-30,1;UBERON:0004914,7.48e-30,1;UBERON:0000997,2.37e-29,1;UBERON:0005056,2.37e-29,1;UBERON:0004903,2.74e-15,2;UBERON:0002173,2.74e-15,2;UBERON:0002186,2.74e-15,2;UBERON:0000058,3.96e-14,19;UBERON:0002114,6.73e-11,2;UBERON:0004821,1.20e-10,3;UBERON:0003215,1.20e-10,3;UBERON:0010368,1.20e-10,3;UBERON:0009911,1.20e-10,3;UBERON:0002299,1.20e-10,3;UBERON:0006524,1.20e-10,3;UBERON:0008874,1.20e-10,3;UBERON:0002169,1.20e-10,3;UBERON:0004894,1.20e-10,3;UBERON:0001987,2.43e-08,4;UBERON:0004340,2.43e-08,4;UBERON:0002108,4.79e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.98849729306303,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,2.15583274311631,0.174118413160805,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,8.42779691437158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82095634235275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:46121582..46121588,- | |||
}} |
Revision as of 05:26, 23 January 2014
Short description: | p@chrX:46121582..46121588, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:46121582..46121588, - |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.09e-10 | 3 |
pneumocyte | 1.20e-10 | 3 |
glomerular endothelial cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.48e-30 | 1 |
extrahepatic bile duct | 7.48e-30 | 1 |
common bile duct | 7.48e-30 | 1 |
duodenal papilla | 7.48e-30 | 1 |
mammalian vulva | 2.37e-29 | 1 |
external female genitalia | 2.37e-29 | 1 |
bronchoalveolar duct junction | 2.74e-15 | 2 |
alveolar duct | 2.74e-15 | 2 |
bronchiole | 2.74e-15 | 2 |
duct | 3.96e-14 | 19 |
duodenum | 6.73e-11 | 2 |
pulmonary alveolus epithelium | 1.20e-10 | 3 |
alveolus | 1.20e-10 | 3 |
pulmonary lobule | 1.20e-10 | 3 |
lobule | 1.20e-10 | 3 |
alveolus of lung | 1.20e-10 | 3 |
alveolar system | 1.20e-10 | 3 |
pulmonary acinus | 1.20e-10 | 3 |
alveolar sac | 1.20e-10 | 3 |
alveolar wall | 1.20e-10 | 3 |
placenta | 2.43e-08 | 4 |
allantois | 2.43e-08 | 4 |
small intestine | 4.79e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.15e-15 | 2 |
lung adenocarcinoma | 2.74e-15 | 2 |
squamous cell carcinoma | 4.38e-09 | 14 |
carcinoma | 5.34e-07 | 106 |
non-small cell lung carcinoma | 6.77e-07 | 5 |