FFCP PHASE1:Mm9::chr6:78416808..78416822,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=219|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:78416808..78416822,-|id=chr6:78416808..78416822,-|ontology_enrichment_celltype=CL:0000239!4.63e-21!6;CL:0000677!4.63e-21!6;CL:0000212!4.63e-21!6;CL:0000584!4.63e-21!6;CL:0002563!1.68e-18!9;CL:0002251!1.68e-18!9;CL:0000075!5.62e-18!7;CL:0000066!9.89e-13!25;CL:0000473!5.96e-12!3;CL:0000627!5.96e-12!3;CL:0000682!5.96e-12!3;CL:0002076!9.45e-11!15;CL:0000223!7.72e-08!20|ontology_enrichment_celltype_v019_2=CL:0000239,5.40e-29,6;CL:0000677,5.40e-29,6;CL:0000584,5.40e-29,6;CL:0000075,8.19e-25,7;CL:0002563,3.13e-19,9;CL:0002251,3.13e-19,9;CL:0000682,3.66e-16,3;CL:0000066,5.10e-15,25;CL:0002076,2.18e-11,15;CL:0000223,1.96e-08,20;CL:0000473,3.32e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.70e-38!15;UBERON:0001242!1.47e-31!13;UBERON:0000060!1.47e-31!13;UBERON:0001262!1.47e-31!13;UBERON:0004786!1.47e-31!13;UBERON:0004923!6.45e-23!24;UBERON:0000160!8.24e-23!43;UBERON:0003350!1.68e-18!9;UBERON:0004808!1.68e-18!9;UBERON:0001277!1.68e-18!9;UBERON:0005409!1.10e-15!59;UBERON:0000485!5.56e-15!11;UBERON:0000331!5.49e-12!3;UBERON:0002116!5.49e-12!3;UBERON:0001204!5.49e-12!3;UBERON:0001168!5.49e-12!3;UBERON:0001007!4.36e-09!128;UBERON:0001555!4.36e-09!128;UBERON:0007026!4.36e-09!128;UBERON:0004119!6.98e-09!130;UBERON:0000925!6.98e-09!130;UBERON:0006595!6.98e-09!130;UBERON:0001962!3.41e-08!2;UBERON:0001961!3.41e-08!2;UBERON:0001744!3.41e-08!2;UBERON:0004921!3.68e-07!126;UBERON:0004185!3.68e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.34e-46,15;UBERON:0001242,9.26e-37,13;UBERON:0001262,9.26e-37,13;UBERON:0004786,9.26e-37,13;UBERON:0004923,5.00e-28,24;UBERON:0000160,7.57e-25,31;UBERON:0003350,3.13e-19,9;UBERON:0004808,3.13e-19,9;UBERON:0001277,3.13e-19,9;UBERON:0000331,3.26e-16,3;UBERON:0002116,3.26e-16,3;UBERON:0001204,3.26e-16,3;UBERON:0001168,3.26e-16,3;UBERON:0005409,9.34e-16,47;UBERON:0000485,1.14e-15,11;UBERON:0002108,2.69e-12,4;UBERON:0001962,6.92e-11,2;UBERON:0001961,6.92e-11,2;UBERON:0001744,6.92e-11,2;UBERON:0002465,1.53e-07,3;UBERON:0001007,2.38e-07,116;UBERON:0001555,2.38e-07,116;UBERON:0007026,2.38e-07,116;UBERON:0004119,3.48e-07,118;UBERON:0000925,3.48e-07,118;UBERON:0006595,3.48e-07,118|phase1_expression=0,10.8182376368202,10.0099832665698,1.81478526784098,5.00895729946347,1.00727563147134,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,5.50582274561208,10.3361753540704,7.75371593086335,14.0056301245828,14.251756459228,5.04060259519861,31.7074630237086,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,3.43785736662608,0,0,0,0,0,0,2.37264530772256,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:78416808..78416822,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:78416808..78416822,- | |||
|description=CAGE_peak_at_chr6:78416808..78416822,- | |||
|id=chr6:78416808..78416822,- | |||
|ontology_enrichment_celltype=CL:0000239!4.63e-21!6;CL:0000677!4.63e-21!6;CL:0000212!4.63e-21!6;CL:0000584!4.63e-21!6;CL:0002563!1.68e-18!9;CL:0002251!1.68e-18!9;CL:0000075!5.62e-18!7;CL:0000066!9.89e-13!25;CL:0000473!5.96e-12!3;CL:0000627!5.96e-12!3;CL:0000682!5.96e-12!3;CL:0002076!9.45e-11!15;CL:0000223!7.72e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.40e-29,6;CL:0000677,5.40e-29,6;CL:0000584,5.40e-29,6;CL:0000075,8.19e-25,7;CL:0002563,3.13e-19,9;CL:0002251,3.13e-19,9;CL:0000682,3.66e-16,3;CL:0000066,5.10e-15,25;CL:0002076,2.18e-11,15;CL:0000223,1.96e-08,20;CL:0000473,3.32e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.70e-38!15;UBERON:0001242!1.47e-31!13;UBERON:0000060!1.47e-31!13;UBERON:0001262!1.47e-31!13;UBERON:0004786!1.47e-31!13;UBERON:0004923!6.45e-23!24;UBERON:0000160!8.24e-23!43;UBERON:0003350!1.68e-18!9;UBERON:0004808!1.68e-18!9;UBERON:0001277!1.68e-18!9;UBERON:0005409!1.10e-15!59;UBERON:0000485!5.56e-15!11;UBERON:0000331!5.49e-12!3;UBERON:0002116!5.49e-12!3;UBERON:0001204!5.49e-12!3;UBERON:0001168!5.49e-12!3;UBERON:0001007!4.36e-09!128;UBERON:0001555!4.36e-09!128;UBERON:0007026!4.36e-09!128;UBERON:0004119!6.98e-09!130;UBERON:0000925!6.98e-09!130;UBERON:0006595!6.98e-09!130;UBERON:0001962!3.41e-08!2;UBERON:0001961!3.41e-08!2;UBERON:0001744!3.41e-08!2;UBERON:0004921!3.68e-07!126;UBERON:0004185!3.68e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.34e-46,15;UBERON:0001242,9.26e-37,13;UBERON:0001262,9.26e-37,13;UBERON:0004786,9.26e-37,13;UBERON:0004923,5.00e-28,24;UBERON:0000160,7.57e-25,31;UBERON:0003350,3.13e-19,9;UBERON:0004808,3.13e-19,9;UBERON:0001277,3.13e-19,9;UBERON:0000331,3.26e-16,3;UBERON:0002116,3.26e-16,3;UBERON:0001204,3.26e-16,3;UBERON:0001168,3.26e-16,3;UBERON:0005409,9.34e-16,47;UBERON:0000485,1.14e-15,11;UBERON:0002108,2.69e-12,4;UBERON:0001962,6.92e-11,2;UBERON:0001961,6.92e-11,2;UBERON:0001744,6.92e-11,2;UBERON:0002465,1.53e-07,3;UBERON:0001007,2.38e-07,116;UBERON:0001555,2.38e-07,116;UBERON:0007026,2.38e-07,116;UBERON:0004119,3.48e-07,118;UBERON:0000925,3.48e-07,118;UBERON:0006595,3.48e-07,118 | |||
|phase1_expression=0,10.8182376368202,10.0099832665698,1.81478526784098,5.00895729946347,1.00727563147134,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,5.50582274561208,10.3361753540704,7.75371593086335,14.0056301245828,14.251756459228,5.04060259519861,31.7074630237086,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,3.43785736662608,0,0,0,0,0,0,2.37264530772256,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:78416808..78416822,- | |||
}} |
Latest revision as of 03:41, 6 August 2015
Short description: | p@chr6:78416808..78416822, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78416808..78416822, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.40e-29 | 6 |
gut absorptive cell | 5.40e-29 | 6 |
enterocyte | 5.40e-29 | 6 |
columnar/cuboidal epithelial cell | 8.19e-25 | 7 |
intestinal epithelial cell | 3.13e-19 | 9 |
epithelial cell of alimentary canal | 3.13e-19 | 9 |
M cell of gut | 3.66e-16 | 3 |
epithelial cell | 5.10e-15 | 25 |
endo-epithelial cell | 2.18e-11 | 15 |
endodermal cell | 1.96e-08 | 20 |
defensive cell | 3.32e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.34e-46 | 15 |
intestinal mucosa | 9.26e-37 | 13 |
wall of intestine | 9.26e-37 | 13 |
gastrointestinal system mucosa | 9.26e-37 | 13 |
organ component layer | 5.00e-28 | 24 |
intestine | 7.57e-25 | 31 |
epithelium of mucosa | 3.13e-19 | 9 |
gastrointestinal system epithelium | 3.13e-19 | 9 |
intestinal epithelium | 3.13e-19 | 9 |
ileal mucosa | 3.26e-16 | 3 |
ileum | 3.26e-16 | 3 |
mucosa of small intestine | 3.26e-16 | 3 |
wall of small intestine | 3.26e-16 | 3 |
gastrointestinal system | 9.34e-16 | 47 |
simple columnar epithelium | 1.14e-15 | 11 |
small intestine | 2.69e-12 | 4 |
gut-associated lymphoid tissue | 6.92e-11 | 2 |
mucosa-associated lymphoid tissue | 6.92e-11 | 2 |
lymphoid tissue | 6.92e-11 | 2 |
lymphoid system | 1.53e-07 | 3 |
digestive system | 2.38e-07 | 116 |
digestive tract | 2.38e-07 | 116 |
primitive gut | 2.38e-07 | 116 |
endoderm-derived structure | 3.48e-07 | 118 |
endoderm | 3.48e-07 | 118 |
presumptive endoderm | 3.48e-07 | 118 |