FFCP PHASE1:Mm9::chr6:48845242..48845263,+: Difference between revisions
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{{FFCP|EntrezGene=76507|HGNC=|MCL_coexpression_id=126|UniProt=E9PYN9,Q3UKB9|association_with_transcript=0bp_to_ENSMUST00000031835,NM_029638,uc012elk.1_5end|description=CAGE_peak_1_at_Abp1_5end|id=chr6:48845242..48845263,+|ontology_enrichment_celltype=CL:0002563!1.55e-09!9;CL:0002251!1.55e-09!9;CL:0000239!2.93e-07!6;CL:0000677!2.93e-07!6;CL:0000212!2.93e-07!6;CL:0000584!2.93e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.64e-11,9;CL:0002251,1.64e-11,9;CL:0000239,1.12e-08,6;CL:0000677,1.12e-08,6;CL:0000584,1.12e-08,6;CL:0000075,3.02e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.84e-17!43;UBERON:0005409!1.46e-15!59;UBERON:0000344!1.65e-15!15;UBERON:0001242!1.54e-13!13;UBERON:0000060!1.54e-13!13;UBERON:0001262!1.54e-13!13;UBERON:0004786!1.54e-13!13;UBERON:0004923!1.12e-11!24;UBERON:0003350!1.55e-09!9;UBERON:0004808!1.55e-09!9;UBERON:0001277!1.55e-09!9;UBERON:0000485!2.90e-07!11;UBERON:0004119!7.00e-07!130;UBERON:0000925!7.00e-07!130;UBERON:0006595!7.00e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.20e-32,31;UBERON:0005409,4.15e-23,47;UBERON:0000344,5.76e-19,15;UBERON:0001242,1.66e-16,13;UBERON:0001262,1.66e-16,13;UBERON:0004786,1.66e-16,13;UBERON:0003350,1.64e-11,9;UBERON:0004808,1.64e-11,9;UBERON:0001277,1.64e-11,9;UBERON:0004923,2.04e-11,24;UBERON:0000485,5.79e-09,11|phase1_expression=0,246.376637793389,195.6496729375,239.854119566316,262.469362491886,58.4219866253377,62.3745750390054,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,180.79143775655,229.638690348237,225.098929933088,268.364723607104,217.195002547376,791.447542035797,454.158293827395,133.038306393183,0,0,0,27.4409038763711,38.7326723685287,22.4586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6737759300131,0,0,0,0,0,0,0,0,0,0,36.8813931492564,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,24.2309289583559,0,0,281.769131895076,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,171.156929585607,91.2354454989228,0,0,1.9330119198314,18.9582513145942,33.1343285328857,45.2736990147891,203.098438341051,135.547239737861,88.9726639152954,129.918576242871,106.645355654159,186.055617591424,233.645231914544,203.721522539218,0,0,0,0,0.969762435838129,0.631222379012867,0.822074982615345,0.885660887877613,1.255989822731,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0,0,1.64970122972535,0,0,0.302323556964751,0,0,0,7.23599220871019,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05073220482823,0.21183207086382,0,0,0,0,0,0.492422699235184,191.502909665812,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,1.40406943068342,1.04544148007234,2.62035076495413,0,0.330613822901344,0,41.6064064266655,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0.360586348559907,0.590758108698309,0.201932899896295,0.381034033274999,0.705783295957884,1.16949456887703,0.865906574762965,1.05189211963412,0,0,0,0,0.19318959403219,37.161130139334,81.6856244232002,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,2.00022055021454,1.85431551515005,2.56735367673452,2.77966932940177,1.2673964994512,1.13175804831646,2.43467919421694,2.4969809437899,3.27382173046996,1.42888107384922,2.43357084484197,2.50781986602817,0.824171801606613,2.06078488188156,1.71434626192708,1.95223386775271,1.1921809497366,1.0174249164263,1.88218760830661,1.94613598150856,1.09756783723664,2.63069711437843,2.03706170768793,1.68342681497322,1.54225523561426,2.1670986122624,2.86461730218783,1.85924209423159,1.35034627686799,0,5.38042699424439,2.79332370262788,0,0,0|short_description=p1@Abp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76507 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PYN9,uniprot:Q3UKB9 | |||
|association_with_transcript=0bp_to_ENSMUST00000031835,NM_029638,uc012elk.1_5end | |||
|cluster_id=chr6:48845242..48845263,+ | |||
|description=CAGE_peak_1_at_Abp1_5end | |||
|id=chr6:48845242..48845263,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.55e-09!9;CL:0002251!1.55e-09!9;CL:0000239!2.93e-07!6;CL:0000677!2.93e-07!6;CL:0000212!2.93e-07!6;CL:0000584!2.93e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.64e-11,9;CL:0002251,1.64e-11,9;CL:0000239,1.12e-08,6;CL:0000677,1.12e-08,6;CL:0000584,1.12e-08,6;CL:0000075,3.02e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.84e-17!43;UBERON:0005409!1.46e-15!59;UBERON:0000344!1.65e-15!15;UBERON:0001242!1.54e-13!13;UBERON:0000060!1.54e-13!13;UBERON:0001262!1.54e-13!13;UBERON:0004786!1.54e-13!13;UBERON:0004923!1.12e-11!24;UBERON:0003350!1.55e-09!9;UBERON:0004808!1.55e-09!9;UBERON:0001277!1.55e-09!9;UBERON:0000485!2.90e-07!11;UBERON:0004119!7.00e-07!130;UBERON:0000925!7.00e-07!130;UBERON:0006595!7.00e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.20e-32,31;UBERON:0005409,4.15e-23,47;UBERON:0000344,5.76e-19,15;UBERON:0001242,1.66e-16,13;UBERON:0001262,1.66e-16,13;UBERON:0004786,1.66e-16,13;UBERON:0003350,1.64e-11,9;UBERON:0004808,1.64e-11,9;UBERON:0001277,1.64e-11,9;UBERON:0004923,2.04e-11,24;UBERON:0000485,5.79e-09,11 | |||
|phase1_expression=0,246.376637793389,195.6496729375,239.854119566316,262.469362491886,58.4219866253377,62.3745750390054,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,180.79143775655,229.638690348237,225.098929933088,268.364723607104,217.195002547376,791.447542035797,454.158293827395,133.038306393183,0,0,0,27.4409038763711,38.7326723685287,22.4586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6737759300131,0,0,0,0,0,0,0,0,0,0,36.8813931492564,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,24.2309289583559,0,0,281.769131895076,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,171.156929585607,91.2354454989228,0,0,1.9330119198314,18.9582513145942,33.1343285328857,45.2736990147891,203.098438341051,135.547239737861,88.9726639152954,129.918576242871,106.645355654159,186.055617591424,233.645231914544,203.721522539218,0,0,0,0,0.969762435838129,0.631222379012867,0.822074982615345,0.885660887877613,1.255989822731,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0,0,1.64970122972535,0,0,0.302323556964751,0,0,0,7.23599220871019,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05073220482823,0.21183207086382,0,0,0,0,0,0.492422699235184,191.502909665812,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,1.40406943068342,1.04544148007234,2.62035076495413,0,0.330613822901344,0,41.6064064266655,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0.360586348559907,0.590758108698309,0.201932899896295,0.381034033274999,0.705783295957884,1.16949456887703,0.865906574762965,1.05189211963412,0,0,0,0,0.19318959403219,37.161130139334,81.6856244232002,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,2.00022055021454,1.85431551515005,2.56735367673452,2.77966932940177,1.2673964994512,1.13175804831646,2.43467919421694,2.4969809437899,3.27382173046996,1.42888107384922,2.43357084484197,2.50781986602817,0.824171801606613,2.06078488188156,1.71434626192708,1.95223386775271,1.1921809497366,1.0174249164263,1.88218760830661,1.94613598150856,1.09756783723664,2.63069711437843,2.03706170768793,1.68342681497322,1.54225523561426,2.1670986122624,2.86461730218783,1.85924209423159,1.35034627686799,0,5.38042699424439,2.79332370262788,0,0,0 | |||
|short_description=p1@Abp1 | |||
}} |
Revision as of 20:48, 5 August 2015
Short description: | p1@Abp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Abp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 0bp_to_ENSMUST00000031835, NM_029638, uc012elk.1_5end |
EntrezGene: | 76507 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.64e-11 | 9 |
epithelial cell of alimentary canal | 1.64e-11 | 9 |
brush border epithelial cell | 1.12e-08 | 6 |
gut absorptive cell | 1.12e-08 | 6 |
enterocyte | 1.12e-08 | 6 |
columnar/cuboidal epithelial cell | 3.02e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.20e-32 | 31 |
gastrointestinal system | 4.15e-23 | 47 |
mucosa | 5.76e-19 | 15 |
intestinal mucosa | 1.66e-16 | 13 |
wall of intestine | 1.66e-16 | 13 |
gastrointestinal system mucosa | 1.66e-16 | 13 |
epithelium of mucosa | 1.64e-11 | 9 |
gastrointestinal system epithelium | 1.64e-11 | 9 |
intestinal epithelium | 1.64e-11 | 9 |
organ component layer | 2.04e-11 | 24 |
simple columnar epithelium | 5.79e-09 | 11 |