FFCP PHASE1:Hg19::chr9:140119618..140119635,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30529 | |||
|TSSclassifier=strong | |||
|UniProt=A8MQ03 | |||
|association_with_transcript=-8bp_to_ENST00000359069,NM_199001,uc004cmb.2_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_C9orf169_5end | |||
|id=chr9:140119618..140119635,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.00e-24!254;CL:0002076!8.13e-15!43;CL:0000223!1.92e-12!59;CL:0002368!1.34e-07!13;CL:0002251!2.97e-07!21;CL:0002159!8.98e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.21e-12;42!CL:0002368;1.15e-09;13!CL:0002202;6.50e-08;9!CL:0002632;6.50e-08;9!CL:0002251;2.12e-07;20!CL:0002159;4.70e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.21e-25,253;CL:0002076,4.48e-17,42;CL:0000223,4.49e-17,58;CL:0002368,1.21e-09,13;CL:0002202,7.12e-08,9;CL:0002632,7.12e-08,9;CL:0002251,1.98e-07,20;CL:0002159,5.10e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;6.40e-10;58!UBERON:0008947;7.28e-10;29 | |||
|ontology_enrichment_disease=DOID:305!1.95e-18!106;DOID:0050687!2.36e-15!143;DOID:14566!1.48e-09!239;DOID:162!5.81e-09!235;DOID:1749!1.26e-08!14;DOID:299!1.60e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.64e-11;14!DOID:305;7.34e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.86e-23,106;DOID:0050687,8.60e-15,143;DOID:1749,2.08e-11,14;DOID:162,2.47e-07,235;DOID:14566,2.71e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.37e-16!169;UBERON:0000925!1.37e-16!169;UBERON:0006595!1.37e-16!169;UBERON:0001004!7.64e-16!72;UBERON:0000065!1.94e-13!53;UBERON:0001007!8.54e-13!155;UBERON:0001555!8.54e-13!155;UBERON:0007026!8.54e-13!155;UBERON:0000077!1.58e-12!130;UBERON:0001041!5.80e-11!98;UBERON:0000072!9.52e-11!46;UBERON:0008947!2.30e-10!38;UBERON:0003258!2.30e-10!38;UBERON:0004921!3.46e-10!129;UBERON:0004185!3.46e-10!129;UBERON:0001557!1.19e-08!19;UBERON:0001737!9.59e-08!9;UBERON:0005795!4.03e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;7.72e-14;37!UBERON:0001737;1.85e-12;9!UBERON:0001557;1.85e-12;9!UBERON:0000065;1.10e-11;44!UBERON:0001004;6.80e-10;65!UBERON:0007196;1.86e-08;15!UBERON:0001558;1.86e-08;15!UBERON:0005178;3.21e-07;34!UBERON:0002224;3.21e-07;34!UBERON:0002294;3.89e-07;7!UBERON:0001173;3.89e-07;7!UBERON:0003126;4.51e-07;7!UBERON:0001005;4.51e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,5.73e-21,87;UBERON:0004119,3.79e-20,160;UBERON:0000925,3.79e-20,160;UBERON:0006595,3.79e-20,160;UBERON:0001004,5.04e-19,74;UBERON:0000065,2.39e-17,54;UBERON:0000072,4.86e-17,47;UBERON:0001007,1.38e-16,145;UBERON:0001555,1.38e-16,145;UBERON:0007026,1.38e-16,145;UBERON:0004921,5.68e-16,118;UBERON:0008947,3.07e-15,38;UBERON:0003258,3.07e-15,38;UBERON:0001737,1.56e-12,9;UBERON:0001557,1.30e-11,19;UBERON:0007196,2.06e-08,15;UBERON:0001558,2.06e-08,15;UBERON:0000166,6.53e-08,22;UBERON:0005178,6.92e-08,34;UBERON:0002224,6.92e-08,34;UBERON:0005181,1.54e-07,35;UBERON:0005911,3.81e-07,82;UBERON:0003126,4.91e-07,7;UBERON:0001005,4.91e-07,7;UBERON:0000161,5.89e-07,36;UBERON:0002294,6.22e-07,9;UBERON:0001173,6.22e-07,9;UBERON:0004912,6.22e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,7.6758128476967,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.229240217243854,0.57470412614962,0.157421562627358,0.393364276848904,0,0.154816123316076,39.5351126525939,10.2410012384605,3.32778609150109,0.309868802321207,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,1.15877215168659,0,0,0,0,0,0.72038491523742,10.5645633604837,31.8874620794609,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,0,12.210633459991,0.496971951695318,0.25326102332916,0.529636723252875,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0.412210116953756,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0.339121184620975,8.69673839234836,4.90943017063502,2.86804595389004,1.09776335516636,0.530119073285941,0.464775771478074,0.932949495138334,1.7662459561294,0,0,0,0,0,0,3.90412440131485,2.19160097101532,4.57920956778616,6.50734439121124,8.06153943141903,5.45722423955522,4.98875840192608,4.51309369788296,6.54070166808864,0,1.40241773803446,0,0,0,0,0,0,0,0,3.07300799144152,6.74410519545717,1.00528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0.790204397959275,2.57545848628462,0,0,0,4.68669169933885,0.335964256397719,0.283550194484773,0.447792613514241,1.45316969256981,3.83382679165211,1.97065295158377,3.78608266256872,0.207328115540772,0.144119953416961,0.50496973370552,0.126995788584338,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0.514414748524284,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.821905290201534,1.07436577943937,0.112085143993527,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,4.85004114314015,1.66435439510497,0.30239029332968,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,1.60405176242628,11.4180426280511,0,0,0.131124414959424,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0,0,11.5402556302375,0.328014645699706,0.650756789328606,0.103041011647722,0,0,2.87132768998086,15.6014459048765,0,0.386682873168488,0,0,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,1.4875642382488,2.11409074101617,0.893288987462089,2.8324178639554,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,1.15755106853338,0,0,0.6196469961995,0,0,0,0,0,0,0.329294892959902,0,0,2.4055528181378,18.0981614394663,2.17781969722645,0,2.15252686335615,8.42357378338128,11.9726141454902,0.229723400206959,0,0,0,0,0,0,0,0,7.79815719230554,0,4.16568367167754,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,2.61996756571508,0,0,0.891547074219827,0,49.8975973101772,9.50286978664444,38.395087762404,0,0,0,0,0.211125408127993,0,0,0,0,0.492339221844278,0,6.0211795268709,8.77203755910485,0,0.394573622547734,0,0,0,0,0,0.520855522170466,6.29711999972609,0,4.55173793141999,51.3592373591388,4.49136595359079,0,0.583209226766509,0,0,0,0,0,0,0,0.653630781113941,19.1010529661687,29.9336505579771,1.13942055847001,0.46112780877612,0.269272933229316,0,9.8890359516895,0.641183153813036,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0.317873157960757,0,0.489698424477443,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,4.44781693020933,3.08909847366257,3.02823653565821,0,0,0,0,16.0444987524314,0,0,0,0,0,1.05226393590145,0.311064574191741,0,0,0.313932918407225,0,1.13843818411917,0.138674673013139,2.08271686002157,22.2442742130637,21.9389200582614,0,0.171986032471617,3.19295893253981,3.50828722013691,4.18788830971367,314.050435389502,0,0,0.137041924646751,0,0,3.51992488922645,1.52301758477914,0,33.9676336289621,0.432271251462318,0,0,0.576219191952599,0.124252535565433,76.8362552850753,1.49494626680975,1.255234155748,0,0,0,0,0,0,2.36598618851383,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,4.6482077561262,3.62629776877132,3.16796656114669,0,0,0,0,0.803765742325096,3.43848591493084,1.66176135211674,1.799791132412,3.0952078182318,0,3.01891218839339,0.157611414598396,0.104909176269996,0,0,2.30298236783334,0,0,2.79695391420225,1.62899880526114,0,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0,19.7348206248668,0.427149650270779,0.628817220398664,0.414239055347196,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,3.49945142293898,0,0,0.235265819698172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| |||
|short_description=p1@C9orf169 | |||
}} |
Revision as of 04:19, 23 January 2014
Short description: | p1@C9orf169 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf169_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -8bp_to_ENST00000359069, NM_199001, uc004cmb.2_5end |
EntrezGene: | C9orf169 |
HGNC: | 30529 |
UniProt: | A8MQ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.21e-25 | 253 |
endo-epithelial cell | 4.48e-17 | 42 |
endodermal cell | 4.49e-17 | 58 |
respiratory epithelial cell | 1.21e-09 | 13 |
epithelial cell of tracheobronchial tree | 7.12e-08 | 9 |
epithelial cell of lower respiratory tract | 7.12e-08 | 9 |
epithelial cell of alimentary canal | 1.98e-07 | 20 |
general ecto-epithelial cell | 5.10e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
foregut | 5.73e-21 | 87 |
endoderm-derived structure | 3.79e-20 | 160 |
endoderm | 3.79e-20 | 160 |
presumptive endoderm | 3.79e-20 | 160 |
respiratory system | 5.04e-19 | 74 |
respiratory tract | 2.39e-17 | 54 |
segment of respiratory tract | 4.86e-17 | 47 |
digestive system | 1.38e-16 | 145 |
digestive tract | 1.38e-16 | 145 |
primitive gut | 1.38e-16 | 145 |
subdivision of digestive tract | 5.68e-16 | 118 |
respiratory primordium | 3.07e-15 | 38 |
endoderm of foregut | 3.07e-15 | 38 |
larynx | 1.56e-12 | 9 |
upper respiratory tract | 1.30e-11 | 19 |
tracheobronchial tree | 2.06e-08 | 15 |
lower respiratory tract | 2.06e-08 | 15 |
oral opening | 6.53e-08 | 22 |
thoracic cavity element | 6.92e-08 | 34 |
thoracic cavity | 6.92e-08 | 34 |
thoracic segment organ | 1.54e-07 | 35 |
endo-epithelium | 3.81e-07 | 82 |
trachea | 4.91e-07 | 7 |
respiratory airway | 4.91e-07 | 7 |
orifice | 5.89e-07 | 36 |
biliary system | 6.22e-07 | 9 |
biliary tree | 6.22e-07 | 9 |
biliary bud | 6.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.86e-23 | 106 |
cell type cancer | 8.60e-15 | 143 |
squamous cell carcinoma | 2.08e-11 | 14 |
cancer | 2.47e-07 | 235 |
disease of cellular proliferation | 2.71e-07 | 239 |