FFCP PHASE1:Mm9::chr5:145119593..145119596,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:145119593..145119596,+|id=chr5:145119593..145119596,+|ontology_enrichment_celltype=CL:0002563!4.80e-25!9;CL:0002251!4.80e-25!9;CL:0000066!2.40e-22!25;CL:0000223!3.99e-18!20;CL:0002076!2.08e-17!15;CL:0000239!5.32e-17!6;CL:0000677!5.32e-17!6;CL:0000212!5.32e-17!6;CL:0000584!5.32e-17!6;CL:0000075!1.83e-14!7;CL:0002250!1.29e-09!3;CL:0000473!5.76e-09!3;CL:0000627!5.76e-09!3;CL:0000682!5.76e-09!3;CL:0000063!2.15e-07!66|ontology_enrichment_celltype_v019_2=CL:0002563,6.35e-57,9;CL:0002251,6.35e-57,9;CL:0002076,4.60e-34,15;CL:0000239,1.25e-33,6;CL:0000677,1.25e-33,6;CL:0000584,1.25e-33,6;CL:0000066,1.98e-31,25;CL:0000075,7.29e-29,7;CL:0000223,1.81e-25,20;CL:0002250,3.71e-25,3;CL:0000682,2.84e-11,3;CL:0002321,6.69e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.83e-34!15;UBERON:0001242!2.38e-29!13;UBERON:0000060!2.38e-29!13;UBERON:0001262!2.38e-29!13;UBERON:0004786!2.38e-29!13;UBERON:0003350!4.80e-25!9;UBERON:0004808!4.80e-25!9;UBERON:0001277!4.80e-25!9;UBERON:0000485!3.67e-20!11;UBERON:0004923!5.87e-20!24;UBERON:0000160!1.33e-18!43;UBERON:0005409!8.68e-14!59;UBERON:0001007!2.16e-10!128;UBERON:0001555!2.16e-10!128;UBERON:0007026!2.16e-10!128;UBERON:0004119!3.86e-10!130;UBERON:0000925!3.86e-10!130;UBERON:0006595!3.86e-10!130;UBERON:0004921!1.11e-08!126;UBERON:0004185!1.11e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.35e-57,9;UBERON:0004808,6.35e-57,9;UBERON:0001277,6.35e-57,9;UBERON:0001242,2.17e-49,13;UBERON:0001262,2.17e-49,13;UBERON:0004786,2.17e-49,13;UBERON:0000485,1.54e-46,11;UBERON:0000344,9.20e-43,15;UBERON:0004923,1.40e-26,24;UBERON:0000160,1.80e-20,31;UBERON:0005409,2.60e-13,47;UBERON:0003929,5.94e-09,55;UBERON:0000490,2.34e-07,66;UBERON:0005911,5.20e-07,69|phase1_expression=0,4.53668029931169,3.18499467572675,6.65421264875026,5.50985302940982,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,0.380046838912748,0,1.10865255327652,0,0,0,9.24325183204079,2.1610503896604,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.796565093017469,0,0,0,0.203651327845314,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:145119593..145119596,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:145119593..145119596,+ | |||
|description=CAGE_peak_at_chr5:145119593..145119596,+ | |||
|id=chr5:145119593..145119596,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.80e-25!9;CL:0002251!4.80e-25!9;CL:0000066!2.40e-22!25;CL:0000223!3.99e-18!20;CL:0002076!2.08e-17!15;CL:0000239!5.32e-17!6;CL:0000677!5.32e-17!6;CL:0000212!5.32e-17!6;CL:0000584!5.32e-17!6;CL:0000075!1.83e-14!7;CL:0002250!1.29e-09!3;CL:0000473!5.76e-09!3;CL:0000627!5.76e-09!3;CL:0000682!5.76e-09!3;CL:0000063!2.15e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.35e-57,9;CL:0002251,6.35e-57,9;CL:0002076,4.60e-34,15;CL:0000239,1.25e-33,6;CL:0000677,1.25e-33,6;CL:0000584,1.25e-33,6;CL:0000066,1.98e-31,25;CL:0000075,7.29e-29,7;CL:0000223,1.81e-25,20;CL:0002250,3.71e-25,3;CL:0000682,2.84e-11,3;CL:0002321,6.69e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.83e-34!15;UBERON:0001242!2.38e-29!13;UBERON:0000060!2.38e-29!13;UBERON:0001262!2.38e-29!13;UBERON:0004786!2.38e-29!13;UBERON:0003350!4.80e-25!9;UBERON:0004808!4.80e-25!9;UBERON:0001277!4.80e-25!9;UBERON:0000485!3.67e-20!11;UBERON:0004923!5.87e-20!24;UBERON:0000160!1.33e-18!43;UBERON:0005409!8.68e-14!59;UBERON:0001007!2.16e-10!128;UBERON:0001555!2.16e-10!128;UBERON:0007026!2.16e-10!128;UBERON:0004119!3.86e-10!130;UBERON:0000925!3.86e-10!130;UBERON:0006595!3.86e-10!130;UBERON:0004921!1.11e-08!126;UBERON:0004185!1.11e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.35e-57,9;UBERON:0004808,6.35e-57,9;UBERON:0001277,6.35e-57,9;UBERON:0001242,2.17e-49,13;UBERON:0001262,2.17e-49,13;UBERON:0004786,2.17e-49,13;UBERON:0000485,1.54e-46,11;UBERON:0000344,9.20e-43,15;UBERON:0004923,1.40e-26,24;UBERON:0000160,1.80e-20,31;UBERON:0005409,2.60e-13,47;UBERON:0003929,5.94e-09,55;UBERON:0000490,2.34e-07,66;UBERON:0005911,5.20e-07,69 | |||
|phase1_expression=0,4.53668029931169,3.18499467572675,6.65421264875026,5.50985302940982,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,0.380046838912748,0,1.10865255327652,0,0,0,9.24325183204079,2.1610503896604,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.796565093017469,0,0,0,0.203651327845314,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:145119593..145119596,+ | |||
}} |
Latest revision as of 01:02, 4 August 2015
Short description: | p@chr5:145119593..145119596, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:145119593..145119596, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.35e-57 | 9 |
epithelial cell of alimentary canal | 6.35e-57 | 9 |
endo-epithelial cell | 4.60e-34 | 15 |
brush border epithelial cell | 1.25e-33 | 6 |
gut absorptive cell | 1.25e-33 | 6 |
enterocyte | 1.25e-33 | 6 |
epithelial cell | 1.98e-31 | 25 |
columnar/cuboidal epithelial cell | 7.29e-29 | 7 |
endodermal cell | 1.81e-25 | 20 |
intestinal crypt stem cell | 3.71e-25 | 3 |
M cell of gut | 2.84e-11 | 3 |
embryonic cell | 6.69e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.35e-57 | 9 |
gastrointestinal system epithelium | 6.35e-57 | 9 |
intestinal epithelium | 6.35e-57 | 9 |
intestinal mucosa | 2.17e-49 | 13 |
wall of intestine | 2.17e-49 | 13 |
gastrointestinal system mucosa | 2.17e-49 | 13 |
simple columnar epithelium | 1.54e-46 | 11 |
mucosa | 9.20e-43 | 15 |
organ component layer | 1.40e-26 | 24 |
intestine | 1.80e-20 | 31 |
gastrointestinal system | 2.60e-13 | 47 |
gut epithelium | 5.94e-09 | 55 |
unilaminar epithelium | 2.34e-07 | 66 |
endo-epithelium | 5.20e-07 | 69 |