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FFCP PHASE1:Mm9::chr5:144861256..144861265,+: Difference between revisions

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{{FFCP|EntrezGene=231876|HGNC=|MCL_coexpression_id=240|UniProt=Q3TYD6|association_with_transcript=-39bp_to_ENSMUST00000041804,NM_001081109,uc009alg.1_5end|description=CAGE_peak_2_at_Lmtk2_5end|id=chr5:144861256..144861265,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.61e-10,6;CL:0000677,1.61e-10,6;CL:0000584,1.61e-10,6;CL:0000075,7.61e-09,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.05e-09!34;UBERON:0000033!1.05e-08!63;UBERON:0001049!4.74e-08!52;UBERON:0005068!4.74e-08!52;UBERON:0006241!4.74e-08!52;UBERON:0007135!4.74e-08!52;UBERON:0000064!5.87e-08!99;UBERON:0001017!6.92e-08!73;UBERON:0005743!6.92e-08!73;UBERON:0002021!9.93e-08!10;UBERON:0000411!9.93e-08!10;UBERON:0001950!9.93e-08!10;UBERON:0000955!1.00e-07!50;UBERON:0006238!1.00e-07!50;UBERON:0000344!1.77e-07!15;UBERON:0002791!2.07e-07!29;UBERON:0003528!2.07e-07!29;UBERON:0001893!2.07e-07!29;UBERON:0000073!2.58e-07!75;UBERON:0001016!2.58e-07!75;UBERON:0004121!2.66e-07!102;UBERON:0000924!2.66e-07!102;UBERON:0006601!2.66e-07!102;UBERON:0002616!2.82e-07!49;UBERON:0003056!4.79e-07!49;UBERON:0004923!5.21e-07!24;UBERON:0002346!7.13e-07!71;UBERON:0003075!7.13e-07!71;UBERON:0007284!7.13e-07!71;UBERON:0003080!9.84e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.26e-15,10;UBERON:0000411,1.26e-15,10;UBERON:0001950,1.26e-15,10;UBERON:0000344,9.19e-14,15;UBERON:0001242,2.42e-11,13;UBERON:0001262,2.42e-11,13;UBERON:0004786,2.42e-11,13;UBERON:0000073,4.99e-10,54;UBERON:0002020,5.46e-10,34;UBERON:0002619,1.32e-09,17;UBERON:0000160,3.33e-09,31;UBERON:0001017,8.04e-09,73;UBERON:0001049,8.56e-09,52;UBERON:0005068,8.56e-09,52;UBERON:0006241,8.56e-09,52;UBERON:0007135,8.56e-09,52;UBERON:0000956,9.06e-09,21;UBERON:0001869,9.06e-09,21;UBERON:0000203,9.06e-09,21;UBERON:0004923,9.78e-09,24;UBERON:0001016,2.16e-08,75;UBERON:0000955,9.42e-08,47;UBERON:0006238,9.42e-08,47;UBERON:0003528,1.20e-07,29;UBERON:0002791,1.20e-07,29;UBERON:0001893,1.20e-07,29;UBERON:0011216,2.79e-07,194;UBERON:0002780,2.98e-07,39;UBERON:0001890,2.98e-07,39;UBERON:0006240,2.98e-07,39;UBERON:0002616,5.22e-07,46;UBERON:0003080,5.80e-07,40|phase1_expression=0.480446541314382,10.4692622291808,20.0199665331396,10.8887116070459,12.0214975187123,4.53274034162102,2.33612640595526,0.258246646883153,0.140788722151667,1.40438715793196,0.171217968225505,0.319088635981346,0.342401459862411,0.611942816932982,0,0,0,0.473193248037357,0.411343300817216,0,1.19060606211498,0,0,2.55987876469451,2.2940928106717,15.5042630311055,6.46142994238612,8.18790684206378,3.42042155021473,1.76421090831952,2.21730510655305,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,1.76469446409304,2.73218193983378,0.971020706062307,0.251793635951155,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0.286533439938757,1.54701627683233,0.606949382578793,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0,1.14260393761521,0.662605622854841,0.367472397644862,0.575072826109418,0.919218786610021,1.10115880999389,1.27687338085188,0.46081959976873,0.263772575460388,0.365950574409639,1.56274011167028,1.67509799400829,0.56276261003168,0.45839474333043,1.17851434189467,1.28134512719193,1.1183966749518,0.075726193333184,0.0755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0,0.259786004602869,0,0.563373679106722,0,0,0,0.865964164044856,0.506719730950197,0,1.02765491747154,0,0.29688427812965,0.520455980298408,0,0,0.301445281105245,0.23517741427141,0,0.741584903203122,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.878342391034642,0.41889341362691,1.53274233125155,0.11981512450592,0,0.508280908292259,0.449371918214468,0.915001205637253,0.628271760564322,3.99795936442236,2.81287003063364,1.24672826735736,1.1356888414743,0,0.124406970610093,0,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.30140963567143,0.680364991513279,0.512454881139399,0.374806898238915,0.517406741478031,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0,0.473489471170421,0.393528463494808,0.308534225774757,0.465067889500816,0,0.583826711835847,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0,0.841159794256509,1.23485534855141,4.95628174475697,1.32225283331772,0.213288250535234,0.464473343720877,0.38660238396628,0,0.444756087689741,0.190225626112559,2.37264530772256,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,1.79763881730844,1.94524244887225,1.39398891278057,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0.569128834118316,0,0.470996183524124,0.863780147452604,0.592905254174298,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0.18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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:231876
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=uniprot:Q3TYD6
|association_with_transcript=-39bp_to_ENSMUST00000041804,NM_001081109,uc009alg.1_5end
|cluster_id=chr5:144861256..144861265,+
|description=CAGE_peak_2_at_Lmtk2_5end
|id=chr5:144861256..144861265,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,1.61e-10,6;CL:0000677,1.61e-10,6;CL:0000584,1.61e-10,6;CL:0000075,7.61e-09,7
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.26e-15,10;UBERON:0000411,1.26e-15,10;UBERON:0001950,1.26e-15,10;UBERON:0000344,9.19e-14,15;UBERON:0001242,2.42e-11,13;UBERON:0001262,2.42e-11,13;UBERON:0004786,2.42e-11,13;UBERON:0000073,4.99e-10,54;UBERON:0002020,5.46e-10,34;UBERON:0002619,1.32e-09,17;UBERON:0000160,3.33e-09,31;UBERON:0001017,8.04e-09,73;UBERON:0001049,8.56e-09,52;UBERON:0005068,8.56e-09,52;UBERON:0006241,8.56e-09,52;UBERON:0007135,8.56e-09,52;UBERON:0000956,9.06e-09,21;UBERON:0001869,9.06e-09,21;UBERON:0000203,9.06e-09,21;UBERON:0004923,9.78e-09,24;UBERON:0001016,2.16e-08,75;UBERON:0000955,9.42e-08,47;UBERON:0006238,9.42e-08,47;UBERON:0003528,1.20e-07,29;UBERON:0002791,1.20e-07,29;UBERON:0001893,1.20e-07,29;UBERON:0011216,2.79e-07,194;UBERON:0002780,2.98e-07,39;UBERON:0001890,2.98e-07,39;UBERON:0006240,2.98e-07,39;UBERON:0002616,5.22e-07,46;UBERON:0003080,5.80e-07,40
|phase1_expression=0.480446541314382,10.4692622291808,20.0199665331396,10.8887116070459,12.0214975187123,4.53274034162102,2.33612640595526,0.258246646883153,0.140788722151667,1.40438715793196,0.171217968225505,0.319088635981346,0.342401459862411,0.611942816932982,0,0,0,0.473193248037357,0.411343300817216,0,1.19060606211498,0,0,2.55987876469451,2.2940928106717,15.5042630311055,6.46142994238612,8.18790684206378,3.42042155021473,1.76421090831952,2.21730510655305,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,1.76469446409304,2.73218193983378,0.971020706062307,0.251793635951155,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0.286533439938757,1.54701627683233,0.606949382578793,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0,1.14260393761521,0.662605622854841,0.367472397644862,0.575072826109418,0.919218786610021,1.10115880999389,1.27687338085188,0.46081959976873,0.263772575460388,0.365950574409639,1.56274011167028,1.67509799400829,0.56276261003168,0.45839474333043,1.17851434189467,1.28134512719193,1.1183966749518,0.075726193333184,0.0755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.280888840263504,0,0.259786004602869,0,0.563373679106722,0,0,0,0.865964164044856,0.506719730950197,0,1.02765491747154,0,0.29688427812965,0.520455980298408,0,0,0.301445281105245,0.23517741427141,0,0.741584903203122,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.878342391034642,0.41889341362691,1.53274233125155,0.11981512450592,0,0.508280908292259,0.449371918214468,0.915001205637253,0.628271760564322,3.99795936442236,2.81287003063364,1.24672826735736,1.1356888414743,0,0.124406970610093,0,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.30140963567143,0.680364991513279,0.512454881139399,0.374806898238915,0.517406741478031,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0,0.473489471170421,0.393528463494808,0.308534225774757,0.465067889500816,0,0.583826711835847,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0,0.841159794256509,1.23485534855141,4.95628174475697,1.32225283331772,0.213288250535234,0.464473343720877,0.38660238396628,0,0.444756087689741,0.190225626112559,2.37264530772256,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,1.79763881730844,1.94524244887225,1.39398891278057,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0.569128834118316,0,0.470996183524124,0.863780147452604,0.592905254174298,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,1.42826184531608,1.17080188714679,0.945810864637146,0.44292937929755,0.159454768657487,0.491589944147214,1.55416483679306,1.15719246865209,0,0,0,0.551873492609465,1.12385412991454,1.17211686592203,0,0,0.315508219416257,0.390438744296638,0.646270193198397,1.67278158566786,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,3.53453448063988,0,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0.906970670894253,0.377210159511796,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.532020700926821,0,0.164549020602121,1.522324745573,0.23467170806371,2.1183207086382,0,0.65954501176592,0,0.482503399425247,0.477489376012546,1.14898629821543,0.874442509889552,0.370850604021019,0.854354403989263,0.82554747185289,0.185194527369712,0.941842285023455,0.410082683163076,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0.474503990371703,0.203319467126849,0.540026704109006,1.67270636811575,0.218362563746178,0.269728692769641,0.495920734352016,0,0.518459893167171,0.621339313086926,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0.117357238645754,0.39061315453185,0.629156066554265,0.966336483304024,0.576060012515731,0.632022241256357,0,0.308132871494482,0.129920822977795,0,0.39736270956253,0,0,0.100966449948148,0.381034033274999,0.100826185136841,0.292373642219257,0.0962118416403295,0,0.680191150845634,0.665957860122194,0.986852422704233,0.335769232728157,0.386379188064381,0,0.183151624267265,0.643105137237198,0,3.95326289831947,5.52390283808612,5.72895513439397,6.8741272937475,6.16574267793578,2.2661816921691,4.72515750162264,4.05289082901798,4.07828168085784,4.14208249401456,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0.280924522409647,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0.814824683075171,0,0.355905054372522,0.591026894253381,0.409231043169689,0.154936841185966,0,0.749431733813838,0,0.859484216193193,0.191288332068843,0,0.231867835620421
|short_description=p2@Lmtk2
}}

Revision as of 00:55, 4 August 2015

Short description:p2@Lmtk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lmtk2_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: -39bp_to_ENSMUST00000041804, NM_001081109, uc009alg.1_5end
EntrezGene:231876
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lmtk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I28.19
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell1.61e-106
gut absorptive cell1.61e-106
enterocyte1.61e-106
columnar/cuboidal epithelial cell7.61e-097

Uber anatomy
Ontology termp-valuen
occipital lobe1.26e-1510
visual cortex1.26e-1510
neocortex1.26e-1510
mucosa9.19e-1415
intestinal mucosa2.42e-1113
wall of intestine2.42e-1113
gastrointestinal system mucosa2.42e-1113
regional part of nervous system4.99e-1054
gray matter5.46e-1034
regional part of cerebral cortex1.32e-0917
intestine3.33e-0931
central nervous system8.04e-0973
neural tube8.56e-0952
neural rod8.56e-0952
future spinal cord8.56e-0952
neural keel8.56e-0952
cerebral cortex9.06e-0921
cerebral hemisphere9.06e-0921
pallium9.06e-0921
organ component layer9.78e-0924
nervous system2.16e-0875
brain9.42e-0847
future brain9.42e-0847
brain grey matter1.20e-0729
regional part of telencephalon1.20e-0729
telencephalon1.20e-0729
organ system subdivision2.79e-07194
regional part of forebrain2.98e-0739
forebrain2.98e-0739
future forebrain2.98e-0739
regional part of brain5.22e-0746
anterior neural tube5.80e-0740
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