FFCP PHASE1:Hg19::chr9:113431060..113431077,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4593 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7525 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000416899_5end | |||
|coexpression_cluster_id=C1107 | |||
|description=CAGE_peak_1_at_MUSK_5end | |||
|id=chr9:113431060..113431077,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.75e-20!9;CL:0000515!5.33e-11!4;CL:0000594!2.36e-07!3;CL:0002504!3.60e-07!3;CL:1000279!3.60e-07!3;CL:1000280!3.60e-07!3;CL:0000680!8.93e-07!57;CL:0000056!8.93e-07!57;CL:0000355!8.93e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.72e-26;9!CL:0000680;4.07e-20;7!CL:0000056;6.80e-17;4!CL:0000515;3.80e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.68e-26,9;CL:0000515,6.29e-17,4;CL:0000680,1.97e-08,58;CL:0000056,1.97e-08,58;CL:0000355,1.97e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000515;6.80e-17;4!UBERON:0006603;3.28e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-18!115;UBERON:0002385!1.23e-12!63;UBERON:0001015!1.23e-12!63;UBERON:0000383!1.23e-12!63;UBERON:0000059!1.99e-12!11;UBERON:0001155!6.78e-12!9;UBERON:0001134!1.42e-10!61;UBERON:0002036!1.42e-10!61;UBERON:0003082!1.42e-10!61;UBERON:0000160!2.60e-09!27;UBERON:0000481!1.35e-08!347;UBERON:0004290!1.49e-08!70;UBERON:0003104!1.75e-08!238;UBERON:0009142!1.75e-08!238;UBERON:0004151!4.30e-08!3;UBERON:0005409!7.19e-08!35;UBERON:0003978!1.02e-07!3;UBERON:0009751!1.02e-07!3;UBERON:0000946!1.02e-07!3;UBERON:0002523!1.02e-07!3;UBERON:0005983!1.02e-07!3;UBERON:0002165!1.02e-07!3;UBERON:0002062!1.02e-07!3;UBERON:0007280!1.02e-07!3;UBERON:0000486!2.25e-07!82;UBERON:0000914!3.28e-07!83;UBERON:0002329!3.28e-07!83;UBERON:0003077!3.28e-07!83;UBERON:0003059!3.28e-07!83;UBERON:0007282!3.28e-07!83;UBERON:0009618!3.28e-07!83;UBERON:0007285!3.28e-07!83;UBERON:0001723!3.45e-07!3;UBERON:0001033!3.45e-07!3;UBERON:0010056!3.45e-07!3;UBERON:0004921!5.69e-07!129;UBERON:0004185!5.69e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.86e-46;16!UBERON:0002036;6.86e-46;16!UBERON:0002385;8.23e-32;31!UBERON:0001015;8.23e-32;31!UBERON:0000383;8.23e-32;31!UBERON:0004151;2.99e-12;3!UBERON:0000160;1.34e-09;17!UBERON:0002081;5.10e-09;2!UBERON:0000341;5.86e-09;2!UBERON:0002133;9.55e-09;2!UBERON:0000059;1.80e-08;11!UBERON:0005409;2.67e-07;22!UBERON:0002204;3.08e-07;70!UBERON:0004921;3.29e-07;33!UBERON:0001155;4.95e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,2.05e-15,64;UBERON:0001015,2.05e-15,64;UBERON:0000383,2.05e-15,64;UBERON:0007023,1.02e-14,114;UBERON:0001134,1.88e-12,62;UBERON:0002036,1.88e-12,62;UBERON:0003082,1.88e-12,62;UBERON:0004151,3.37e-12,3;UBERON:0002329,2.10e-10,71;UBERON:0003059,2.10e-10,71;UBERON:0007282,2.10e-10,71;UBERON:0004290,2.10e-10,71;UBERON:0009618,2.10e-10,71;UBERON:0003077,3.29e-10,72;UBERON:0007285,3.29e-10,72;UBERON:0007524,5.10e-10,73;UBERON:0000160,1.18e-09,17;UBERON:0007503,3.81e-09,78;UBERON:0002081,5.98e-09,2;UBERON:0010227,5.98e-09,2;UBERON:0000341,7.87e-09,2;UBERON:0002133,1.25e-08,2;UBERON:0000059,1.48e-08,11;UBERON:0000486,2.22e-08,83;UBERON:0003104,4.16e-08,160;UBERON:0009142,4.16e-08,160;UBERON:0005256,6.54e-08,122;UBERON:0001155,4.57e-07,9 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,9.55556624006023,3.90405012845728,21.4873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0,0,0,0,4.93020663289822,1.07834031980251,1.22802939780904,2.48105830472155,0.214840489736547,1.0151168573996,2.98293195956353,18.6967274858148,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84741482246853,0,0,0,0,0,1.2591072030832,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0,0,0,0,0,0,0,0,0,0,0,0,3.59169090190492,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,3.89213283814692,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,1.54787429224455,0,0,0,1.93978032976839,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.687481272035051,7.17873024576814,1.19807400299395,0.858452096273142,1.56220020209311,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73755943986931,2.98688179689365,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,2.66943366478961,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6014992918103,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.124909547064,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,1.17739639275771,0,0,1.82631744101899,0,0,0,0,0,10.2576380658522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9485767437579,30.6961792500179,13.9177731760584,0,0,0,0,0,0,0,2.39239890134628,0.655678681511872,0,1.47088993052343,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,3.18270532516606,2.14371304124943,0,0,2.13233981900981,4.04709533488359,0,0.0620747142958579,0,0,0,0.435433495793923,3.08009970976753,1.27968900727716,0.717222053926764,0.332660356546013,0,0,0,0,0,0,0,1.99727032255654,0.402547587182052,0 | |||
|short_description=p1@MUSK | |||
}} |
Revision as of 02:44, 23 January 2014
Short description: | p1@MUSK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MUSK_5end |
Coexpression cluster: | C1107_Myoblast_mesenchymal_skeletal_diaphragm_tongue_Prostate_penis |
Association with transcript: | 1bp_to_ENST00000416899_5end |
EntrezGene: | MUSK |
HGNC: | 7525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.68e-26 | 9 |
skeletal muscle myoblast | 6.29e-17 | 4 |
muscle precursor cell | 1.97e-08 | 58 |
myoblast | 1.97e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.97e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 2.05e-15 | 64 |
musculature | 2.05e-15 | 64 |
musculature of body | 2.05e-15 | 64 |
adult organism | 1.02e-14 | 114 |
skeletal muscle tissue | 1.88e-12 | 62 |
striated muscle tissue | 1.88e-12 | 62 |
myotome | 1.88e-12 | 62 |
cardiac chamber | 3.37e-12 | 3 |
somite | 2.10e-10 | 71 |
presomitic mesoderm | 2.10e-10 | 71 |
presumptive segmental plate | 2.10e-10 | 71 |
dermomyotome | 2.10e-10 | 71 |
trunk paraxial mesoderm | 2.10e-10 | 71 |
paraxial mesoderm | 3.29e-10 | 72 |
presumptive paraxial mesoderm | 3.29e-10 | 72 |
dense mesenchyme tissue | 5.10e-10 | 73 |
intestine | 1.18e-09 | 17 |
epithelial vesicle | 3.81e-09 | 78 |
cardiac atrium | 5.98e-09 | 2 |
future cardiac atrium | 5.98e-09 | 2 |
throat | 7.87e-09 | 2 |
atrioventricular valve | 1.25e-08 | 2 |
large intestine | 1.48e-08 | 11 |
multilaminar epithelium | 2.22e-08 | 83 |
mesenchyme | 4.16e-08 | 160 |
entire embryonic mesenchyme | 4.16e-08 | 160 |
trunk mesenchyme | 6.54e-08 | 122 |
colon | 4.57e-07 | 9 |