FFCP PHASE1:Hg19::chr8:22960426..22960442,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8794 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11906 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJI1,F5H6H7,F5H3Y5 | |||
|association_with_transcript=0bp_to_ENST00000517558,ENST00000540813,ENST00000544885,uc003xcy.2,uc011kzr.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_TNFRSF10C_5end | |||
|id=chr8:22960426..22960442,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.86e-20!42;CL:0000860!6.19e-17!45;CL:0002139!7.27e-16!24;CL:0000115!1.46e-15!35;CL:0000766!6.68e-13!76;CL:0002078!1.22e-12!44;CL:0000071!2.76e-12!18;CL:0002546!2.76e-12!18;CL:0002194!3.97e-10!63;CL:0000576!3.97e-10!63;CL:0000040!3.97e-10!63;CL:0000559!3.97e-10!63;CL:0002009!6.69e-10!65;CL:0000557!9.77e-10!71;CL:0000839!5.80e-09!70;CL:1000449!1.18e-08!16;CL:0002371!2.30e-08!591;CL:0002681!3.18e-07!13;CL:0002584!3.18e-07!13;CL:0000144!8.69e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.45e-18;24!CL:0000860;2.27e-17;33!CL:0002057;2.27e-17;33!CL:0000115;1.60e-14;36!CL:0000071;1.07e-13;18!CL:0000473;1.97e-13;39!CL:0000234;1.97e-13;39!CL:0000576;8.91e-11;48!CL:1000449;1.13e-09;15!CL:0002078;3.56e-09;45!CL:0000766;2.23e-08;69!CL:0002681;4.54e-08;12!CL:0002584;4.54e-08;12!CL:1000497;1.10e-07;17!CL:0002518;1.10e-07;17!CL:1000413;2.31e-07;9!CL:1000507;9.75e-07;10!CL:1000494;9.75e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.93e-22,42;CL:0002057,2.93e-22,42;CL:0000473,2.05e-20,48;CL:0000234,2.05e-20,48;CL:0002139,1.03e-17,24;CL:0000115,2.85e-17,36;CL:0000766,3.52e-15,72;CL:0002078,5.39e-14,45;CL:0000071,1.14e-13,18;CL:0002546,1.14e-13,18;CL:0002194,1.02e-12,59;CL:0000576,1.02e-12,59;CL:0000040,1.02e-12,59;CL:0000559,1.02e-12,59;CL:0002009,2.77e-12,61;CL:0000557,2.44e-11,67;CL:0000839,7.95e-11,66;CL:1000449,1.14e-09,15;CL:0002681,4.68e-08,12;CL:0002584,4.68e-08,12;CL:1000497,1.11e-07,17;CL:0002518,1.11e-07,17;CL:1000413,2.34e-07,9;CL:0000763,4.38e-07,108;CL:0000049,4.38e-07,108;CL:1000507,9.93e-07,10;CL:1000494,9.93e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.67e-16;42!CL:0002546;1.07e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.91e-27!216;UBERON:0001009!9.22e-18!113;UBERON:0000467!1.23e-17!625;UBERON:0000480!2.47e-17!626;UBERON:0004535!5.04e-17!110;UBERON:0000468!4.43e-16!659;UBERON:0002193!1.44e-14!112;UBERON:0002049!3.99e-14!79;UBERON:0007798!3.99e-14!79;UBERON:0000055!1.83e-12!69;UBERON:0001986!2.76e-12!18;UBERON:0004638!2.76e-12!18;UBERON:0004852!2.76e-12!18;UBERON:0002390!2.17e-11!102;UBERON:0003061!2.17e-11!102;UBERON:0004872!1.04e-10!84;UBERON:0000926!1.29e-10!448;UBERON:0004120!1.29e-10!448;UBERON:0006603!1.29e-10!448;UBERON:0000922!1.37e-10!612;UBERON:0000487!2.09e-10!22;UBERON:0003914!4.18e-10!118;UBERON:0000923!4.33e-10!604;UBERON:0005291!4.33e-10!604;UBERON:0006598!4.33e-10!604;UBERON:0002532!4.33e-10!604;UBERON:0001981!4.45e-10!60;UBERON:0007500!4.45e-10!60;UBERON:0004537!4.45e-10!60;UBERON:0006965!4.45e-10!60;UBERON:0002050!7.28e-10!605;UBERON:0005423!7.28e-10!605;UBERON:0006914!9.61e-09!25;UBERON:0002371!1.03e-08!80;UBERON:0004211!1.18e-08!16;UBERON:0001285!1.18e-08!16;UBERON:0007684!1.18e-08!16;UBERON:0003220!1.18e-08!16;UBERON:0004208!1.18e-08!16;UBERON:0006555!1.70e-08!17;UBERON:0005103!1.70e-08!17;UBERON:0000083!1.70e-08!17;UBERON:0009201!1.70e-08!17;UBERON:0004819!1.70e-08!17;UBERON:0006553!1.70e-08!17;UBERON:0003074!1.70e-08!17;UBERON:0003060!1.70e-08!17;UBERON:0000479!3.13e-08!787;UBERON:0002405!5.12e-08!115;UBERON:0000025!1.37e-07!194;UBERON:0003887!1.75e-07!21;UBERON:0004111!1.95e-07!241;UBERON:0000080!1.95e-07!18;UBERON:0002120!1.95e-07!18;UBERON:0004875!1.95e-07!18;UBERON:0005721!1.95e-07!18;UBERON:0005754!1.95e-07!18;UBERON:0007297!1.95e-07!18;UBERON:0001225!3.18e-07!13;UBERON:0008987!3.18e-07!13;UBERON:0000483!3.95e-07!309;UBERON:0000119!5.03e-07!312;UBERON:0000353!8.85e-07!17;UBERON:0000477!9.06e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.07e-13;18!UBERON:0001986;1.07e-13;18!UBERON:0004852;1.07e-13;18!UBERON:0000487;4.06e-12;22!UBERON:0006555;1.13e-09;15!UBERON:0004819;1.13e-09;15!UBERON:0001285;1.13e-09;15!UBERON:0007684;1.13e-09;15!UBERON:0006914;2.09e-09;25!UBERON:0003914;1.88e-08;74!UBERON:0000353;3.22e-08;15!UBERON:0001225;4.54e-08;12!UBERON:0008987;4.54e-08;12!UBERON:0000490;8.52e-08;33!UBERON:0000055;1.19e-07;65!UBERON:0003915;2.31e-07;9!UBERON:0004700;2.31e-07;9!UBERON:0001917;2.31e-07;9!UBERON:0001009;5.31e-07;112!UBERON:0002049;6.13e-07;75!UBERON:0007798;6.13e-07;75!UBERON:0004211;9.75e-07;10!UBERON:0009773;9.75e-07;10!UBERON:0001231;9.75e-07;10!UBERON:0004810;9.75e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.05e-25,203;UBERON:0001009,1.81e-18,112;UBERON:0004535,1.19e-17,109;UBERON:0002193,7.23e-17,108;UBERON:0000926,1.62e-16,315;UBERON:0004120,1.62e-16,315;UBERON:0006603,1.62e-16,315;UBERON:0002049,4.03e-14,78;UBERON:0007798,4.03e-14,78;UBERON:0004638,1.14e-13,18;UBERON:0001986,1.14e-13,18;UBERON:0004852,1.14e-13,18;UBERON:0002390,3.41e-13,98;UBERON:0003061,3.41e-13,98;UBERON:0000055,1.39e-12,68;UBERON:0002405,1.98e-12,93;UBERON:0000487,4.42e-12,22;UBERON:0004872,1.07e-10,83;UBERON:0003914,2.31e-10,117;UBERON:0000922,2.47e-10,592;UBERON:0005423,3.63e-10,581;UBERON:0007500,8.23e-10,59;UBERON:0001981,8.23e-10,59;UBERON:0004537,8.23e-10,59;UBERON:0006965,8.23e-10,59;UBERON:0004211,1.14e-09,15;UBERON:0009773,1.14e-09,15;UBERON:0001231,1.14e-09,15;UBERON:0001285,1.14e-09,15;UBERON:0007684,1.14e-09,15;UBERON:0004208,1.14e-09,15;UBERON:0002371,1.21e-09,76;UBERON:0006555,1.82e-09,16;UBERON:0004819,1.82e-09,16;UBERON:0006914,2.23e-09,25;UBERON:0000353,3.33e-08,15;UBERON:0000923,3.79e-08,560;UBERON:0010316,3.79e-08,560;UBERON:0005291,3.79e-08,560;UBERON:0006598,3.79e-08,560;UBERON:0010317,3.79e-08,560;UBERON:0002532,3.79e-08,560;UBERON:0001225,4.68e-08,12;UBERON:0008987,4.68e-08,12;UBERON:0001008,7.17e-08,48;UBERON:0002050,7.52e-08,564;UBERON:0006554,8.37e-08,47;UBERON:0001474,1.32e-07,82;UBERON:0003915,2.34e-07,9;UBERON:0004700,2.34e-07,9;UBERON:0001917,2.34e-07,9;UBERON:0004810,9.93e-07,10 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.845726424575827,1.0007329835313,0.893922188854576,0.872338524100369,0,0,1.56711376919903,15.2355040630935,16.7472280313383,10.7036272343784,11.3419800638235,1.11389717664042,0.994192127183747,2.6893005858071,1.80808358407193,3.65155045193687,0.975865597581014,0.738726348460727,1.02000345622126,0.626909442956176,2.86235987131057,4.92747930262383,2.38531015230125,1.60468152070698,1.23150884174919,0.865818594450472,3.54027849164014,1.91914699048606,3.09632246632152,0.919421224478927,0.90361775633475,1.84877005083394,0,0,2.93600439334847,9.41792194504192,3.81034450193269,5.20826089718044,0.223915474239924,0,0.77272670290256,25.1538953088647,10.5805264232867,53.8536615836952,13.0160260667183,6.98985409637104,13.6270803193846,8.63077176966451,8.45330331546032,18.2091317014211,10.3423704220986,7.10033151942209,17.6054432572644,15.6241141820362,7.64137220161968,26.51737116452,11.0190201253525,11.5534449747394,31.327519164153,18.4716728104561,11.1699648268114,36.229103795279,6.96502172708602,7.37600792098482,21.7987787148451,9.54744927975624,5.21482918420201,19.9813737128707,13.3187890579341,14.362827803515,25.9499157701525,3.80259515361495,6.80333759888139,7.75736988380991,14.1534075244584,13.8162741414186,13.1794981091606,8.26536956849621,9.94583385995451,9.86386430329023,0,9.83049500271837,2.66852776159066,15.7890182349608,2.40237592221607,6.8970292794538,13.2208974556972,7.63243003628291,0.569212969109448,0,0,3.96513985737078,1.12101712596307,1.58030450865046,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,3.82278497188916,0.651083453856419,0,2.86092726247768,0.511946444617674,19.9889162483753,26.7558294809739,6.56902397536837,0.201606743224732,0,0.144824403882799,0,2.01210257911091,2.68511379871414,0,0.50133791063589,0.724232594804119,0.795285947051099,1.45990461090791,2.55244006342983,7.53879951372717,3.77689578480442,2.03017567021455,5.46442932438813,5.19098219898201,0.97364218096405,0.696518949197069,2.12732736830184,0.238490624305342,0,0,17.0935670335366,12.9035189265919,32.9783476527215,15.8286223738723,20.9749718104953,57.4996707654741,28.0053255159326,46.2565998913099,62.2590959701743,51.2122537529945,28.1980521976403,38.7738773916441,85.1776580843112,30.5160356687071,49.4186588207873,49.7399486542324,25.147289734131,34.1212785864466,32.1964938678355,42.7169546805658,48.9148656294187,589.058465939203,469.214119619474,4.79703457356788,0.496971951695318,2.27934920996244,6.3556406790345,6.3104056564739,2.4826786753885,1.12135520028461,0,1.97334038733728,1.8672662123986,1.61652806483626,1.63461903113459,1.05950199351452,1.72852777344,2.10889288650417,0.312160076830321,5.70471821544449,1.19558944441441,1.05691048779388,0,0.140450806702248,1.83738754129404,1.10550885580591,2.47981874821837,0,0,1.82032272387605,2.87447256726495,0.841680569770331,0.250237039743928,1.10825646193673,0.438977620880838,0.30648779579902,0.150238058906597,3.74326204428069,0.89694817844431,1.2813443329114,0.847727604638247,3.30100205692843,0.92747276314595,2.57640540045629,3.90845398296339,2.36286865137773,0.487185025805993,0.252433774244115,1.65689817556139,1.61646056818812,7.81021103536552,1.20902517873168,0.847802961552438,2.31913023795956,1.90922284413584,0.573609190778008,1.46368447355514,1.98794652482228,2.32387885739037,6.63430752098371,6.81266297364197,0,3.12899064659632,3.85944562915731,4.14404764057442,5.10804720835177,10.8281922250438,0.591534000199219,0.674338760312407,0.241011029883482,0.55146986366197,0.435758888184812,0,0.943819157121151,0.588664395376038,1.53898862778556,20.6683527294901,18.231430594448,2.057870056657,0,0,2.94848165003288,0,0,0,4.11762744716461,0.439001141634502,0,0.603173834469785,3.14800713539001,3.25808305310325,9.35941306751621,7.21656710126366,4.40535538905292,22.7772866817494,16.4577750447624,18.5194205030644,24.5427856382632,1.58040879591855,1.71697232418975,1.72351904261178,3.51006397708857,5.7966153292604,0.93733833986777,0.671928512795438,2.55195175036296,4.11969204433102,1.16253575405585,1.53353071666084,0.985326475791887,0.792435906119034,1.4512968087854,3.747118788841,1.00993946741104,0.126995788584338,4.58386110669933,1.17217447210047,1.71072446022705,0.616964956219941,1.8020583470635,0.571652865261156,0.112131084345361,3.05172048183296,0.1466765716419,0.387815147273333,0,0,1.86156681609409,3.12022310734098,0.514414748524284,2.83698264046557,0.799266537048298,0.714889968290738,0,1.64648067356154,0.65147236858747,0,0.791951872933429,0,0.871533458600294,0.99972991182057,1.2162378064119,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.61642896765115,0.895304816199478,0,0.591092280605782,0.215627574859517,0.128343036279748,4.57370323600434,0,1.54657762555539,1.34013012267479,0.637938751653163,529.547965930658,939.366981900638,947.353863714777,0.12269149171914,0.500170521059677,0.542530047399471,0.623912584592421,0.713715955188647,0,0,0,11.3703752027992,1.03473071292505,0,0.18436916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| |||
|short_description=p1@TNFRSF10C | |||
}} |
Revision as of 21:09, 22 January 2014
Short description: | p1@TNFRSF10C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF10C_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000517558, ENST00000540813, ENST00000544885, uc003xcy.2, uc011kzr.1_5end |
EntrezGene: | TNFRSF10C |
HGNC: | 11906 |
UniProt: | E5RJI1F5H6H7F5H3Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.93e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-22 | 42 |
defensive cell | 2.05e-20 | 48 |
phagocyte | 2.05e-20 | 48 |
endothelial cell of vascular tree | 1.03e-17 | 24 |
endothelial cell | 2.85e-17 | 36 |
myeloid leukocyte | 3.52e-15 | 72 |
meso-epithelial cell | 5.39e-14 | 45 |
blood vessel endothelial cell | 1.14e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.14e-13 | 18 |
monopoietic cell | 1.02e-12 | 59 |
monocyte | 1.02e-12 | 59 |
monoblast | 1.02e-12 | 59 |
promonocyte | 1.02e-12 | 59 |
macrophage dendritic cell progenitor | 2.77e-12 | 61 |
granulocyte monocyte progenitor cell | 2.44e-11 | 67 |
myeloid lineage restricted progenitor cell | 7.95e-11 | 66 |
epithelial cell of nephron | 1.14e-09 | 15 |
kidney cortical cell | 4.68e-08 | 12 |
renal cortical epithelial cell | 4.68e-08 | 12 |
kidney cell | 1.11e-07 | 17 |
kidney epithelial cell | 1.11e-07 | 17 |
endothelial cell of artery | 2.34e-07 | 9 |
myeloid cell | 4.38e-07 | 108 |
common myeloid progenitor | 4.38e-07 | 108 |
kidney tubule cell | 9.93e-07 | 10 |
nephron tubule epithelial cell | 9.93e-07 | 10 |