FFCP PHASE1:Mm9::chr4:133176650..133176677,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=343|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:133176650..133176677,-|id=chr4:133176650..133176677,-|ontology_enrichment_celltype=CL:0000542!1.44e-32!13;CL:0000051!1.44e-32!13;CL:0000791!3.35e-32!9;CL:0000789!3.35e-32!9;CL:0002420!3.35e-32!9;CL:0002419!3.35e-32!9;CL:0000790!3.35e-32!9;CL:0000838!1.52e-29!12;CL:0000624!1.20e-28!8;CL:0000084!4.46e-26!11;CL:0000827!4.46e-26!11;CL:0000738!1.99e-24!17;CL:0002087!1.99e-24!17;CL:0000893!1.50e-21!6;CL:0002489!1.50e-21!6;CL:0000898!1.50e-21!6;CL:0000809!1.50e-21!6;CL:0000810!1.50e-21!6;CL:0000895!1.50e-21!6;CL:0000808!1.50e-21!6;CL:0000894!1.50e-21!6;CL:0000806!1.50e-21!6;CL:0000807!1.50e-21!6;CL:0000805!1.50e-21!6;CL:0002425!1.50e-21!6;CL:0002436!1.50e-21!6;CL:0002427!1.50e-21!6;CL:0002428!1.50e-21!6;CL:0002429!1.50e-21!6;CL:0002433!1.50e-21!6;CL:0002431!1.50e-21!6;CL:0002432!1.50e-21!6;CL:0002031!3.91e-19!25;CL:0000988!5.90e-17!32;CL:0002032!5.90e-17!32;CL:0000037!5.90e-17!32;CL:0000566!5.90e-17!32;CL:0000837!5.90e-17!32;CL:0002320!6.77e-13!46;CL:0000134!6.77e-13!46;CL:0000219!2.88e-12!54;CL:0000063!3.79e-08!66|ontology_enrichment_celltype_v019_2=CL:0000791,3.15e-68,9;CL:0000789,3.15e-68,9;CL:0002420,3.15e-68,9;CL:0002419,3.15e-68,9;CL:0000790,3.15e-68,9;CL:0000838,5.33e-65,12;CL:0000542,5.21e-60,13;CL:0000051,5.21e-60,13;CL:0000624,1.18e-58,8;CL:0000084,7.52e-56,11;CL:0000827,7.52e-56,11;CL:0000738,6.54e-46,17;CL:0002087,6.54e-46,17;CL:0000893,9.97e-40,6;CL:0002489,9.97e-40,6;CL:0000898,9.97e-40,6;CL:0000809,9.97e-40,6;CL:0000810,9.97e-40,6;CL:0000895,9.97e-40,6;CL:0000808,9.97e-40,6;CL:0000894,9.97e-40,6;CL:0000806,9.97e-40,6;CL:0000807,9.97e-40,6;CL:0000805,9.97e-40,6;CL:0002425,9.97e-40,6;CL:0002436,9.97e-40,6;CL:0002427,9.97e-40,6;CL:0002428,9.97e-40,6;CL:0002429,9.97e-40,6;CL:0002433,9.97e-40,6;CL:0002431,9.97e-40,6;CL:0002432,9.97e-40,6;CL:0002031,3.19e-31,25;CL:0000988,2.23e-24,32;CL:0002032,2.23e-24,32;CL:0000037,2.23e-24,32;CL:0000837,2.23e-24,32;CL:0002320,6.46e-17,46;CL:0000134,6.46e-17,46;CL:0000219,2.22e-14,54;CL:0000945,2.31e-11,1;CL:0000236,2.31e-11,1;CL:0000826,2.31e-11,1;CL:0000625,2.90e-11,1;CL:0000815,3.65e-11,1;CL:0000792,3.65e-11,1;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.18e-19!23;UBERON:0000974!2.18e-19!23;UBERON:0004807!2.18e-19!23;UBERON:0005058!2.18e-19!23;UBERON:0003351!2.18e-19!23;UBERON:0009113!2.18e-19!23;UBERON:0003295!2.18e-19!23;UBERON:0009722!2.18e-19!23;UBERON:0005562!2.18e-19!23;UBERON:0007690!2.18e-19!23;UBERON:0006562!1.73e-18!24;UBERON:0003408!1.73e-18!24;UBERON:0001557!1.73e-18!24;UBERON:0001042!1.73e-18!24;UBERON:0008814!1.73e-18!24;UBERON:0009145!1.73e-18!24;UBERON:0000072!3.46e-16!27;UBERON:0004177!6.43e-15!29;UBERON:0002384!6.77e-13!46;UBERON:0002390!2.13e-12!45;UBERON:0003061!2.13e-12!45;UBERON:0000063!5.58e-12!35;UBERON:0002193!1.86e-11!48;UBERON:0000065!6.66e-10!41;UBERON:0001004!1.29e-09!42;UBERON:0005057!5.52e-09!51;UBERON:0002405!3.09e-08!70;UBERON:0003929!3.73e-08!55;UBERON:0003081!5.00e-08!88;UBERON:0000490!1.37e-07!66;UBERON:0002368!2.83e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.46e-17,46;UBERON:0002370,1.46e-10,23;UBERON:0000974,1.46e-10,23;UBERON:0004807,1.46e-10,23;UBERON:0005058,1.46e-10,23;UBERON:0003351,1.46e-10,23;UBERON:0009113,1.46e-10,23;UBERON:0003295,1.46e-10,23;UBERON:0009722,1.46e-10,23;UBERON:0005562,1.46e-10,23;UBERON:0007690,1.46e-10,23;UBERON:0006562,3.97e-10,24;UBERON:0003408,3.97e-10,24;UBERON:0001557,3.97e-10,24;UBERON:0001042,3.97e-10,24;UBERON:0008814,3.97e-10,24;UBERON:0009145,3.97e-10,24;UBERON:0000072,5.12e-09,27;UBERON:0004177,2.11e-08,29;UBERON:0005057,2.11e-08,29;UBERON:0000077,5.63e-07,35;UBERON:0007811,8.76e-07,36|phase1_expression=0,0,0,0,0,0,0,4.26106967357202,2.111830832275,2.57470978954193,1.54096171402954,0.239316476986009,1.54080656938085,1.22388563386596,0,0,0,0.315462165358238,0.548457734422955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.56360854529097,11.6057942721815,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:133176650..133176677,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=343 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:133176650..133176677,- | |||
|description=CAGE_peak_at_chr4:133176650..133176677,- | |||
|id=chr4:133176650..133176677,- | |||
|ontology_enrichment_celltype=CL:0000542!1.44e-32!13;CL:0000051!1.44e-32!13;CL:0000791!3.35e-32!9;CL:0000789!3.35e-32!9;CL:0002420!3.35e-32!9;CL:0002419!3.35e-32!9;CL:0000790!3.35e-32!9;CL:0000838!1.52e-29!12;CL:0000624!1.20e-28!8;CL:0000084!4.46e-26!11;CL:0000827!4.46e-26!11;CL:0000738!1.99e-24!17;CL:0002087!1.99e-24!17;CL:0000893!1.50e-21!6;CL:0002489!1.50e-21!6;CL:0000898!1.50e-21!6;CL:0000809!1.50e-21!6;CL:0000810!1.50e-21!6;CL:0000895!1.50e-21!6;CL:0000808!1.50e-21!6;CL:0000894!1.50e-21!6;CL:0000806!1.50e-21!6;CL:0000807!1.50e-21!6;CL:0000805!1.50e-21!6;CL:0002425!1.50e-21!6;CL:0002436!1.50e-21!6;CL:0002427!1.50e-21!6;CL:0002428!1.50e-21!6;CL:0002429!1.50e-21!6;CL:0002433!1.50e-21!6;CL:0002431!1.50e-21!6;CL:0002432!1.50e-21!6;CL:0002031!3.91e-19!25;CL:0000988!5.90e-17!32;CL:0002032!5.90e-17!32;CL:0000037!5.90e-17!32;CL:0000566!5.90e-17!32;CL:0000837!5.90e-17!32;CL:0002320!6.77e-13!46;CL:0000134!6.77e-13!46;CL:0000219!2.88e-12!54;CL:0000063!3.79e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.15e-68,9;CL:0000789,3.15e-68,9;CL:0002420,3.15e-68,9;CL:0002419,3.15e-68,9;CL:0000790,3.15e-68,9;CL:0000838,5.33e-65,12;CL:0000542,5.21e-60,13;CL:0000051,5.21e-60,13;CL:0000624,1.18e-58,8;CL:0000084,7.52e-56,11;CL:0000827,7.52e-56,11;CL:0000738,6.54e-46,17;CL:0002087,6.54e-46,17;CL:0000893,9.97e-40,6;CL:0002489,9.97e-40,6;CL:0000898,9.97e-40,6;CL:0000809,9.97e-40,6;CL:0000810,9.97e-40,6;CL:0000895,9.97e-40,6;CL:0000808,9.97e-40,6;CL:0000894,9.97e-40,6;CL:0000806,9.97e-40,6;CL:0000807,9.97e-40,6;CL:0000805,9.97e-40,6;CL:0002425,9.97e-40,6;CL:0002436,9.97e-40,6;CL:0002427,9.97e-40,6;CL:0002428,9.97e-40,6;CL:0002429,9.97e-40,6;CL:0002433,9.97e-40,6;CL:0002431,9.97e-40,6;CL:0002432,9.97e-40,6;CL:0002031,3.19e-31,25;CL:0000988,2.23e-24,32;CL:0002032,2.23e-24,32;CL:0000037,2.23e-24,32;CL:0000837,2.23e-24,32;CL:0002320,6.46e-17,46;CL:0000134,6.46e-17,46;CL:0000219,2.22e-14,54;CL:0000945,2.31e-11,1;CL:0000236,2.31e-11,1;CL:0000826,2.31e-11,1;CL:0000625,2.90e-11,1;CL:0000815,3.65e-11,1;CL:0000792,3.65e-11,1;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.18e-19!23;UBERON:0000974!2.18e-19!23;UBERON:0004807!2.18e-19!23;UBERON:0005058!2.18e-19!23;UBERON:0003351!2.18e-19!23;UBERON:0009113!2.18e-19!23;UBERON:0003295!2.18e-19!23;UBERON:0009722!2.18e-19!23;UBERON:0005562!2.18e-19!23;UBERON:0007690!2.18e-19!23;UBERON:0006562!1.73e-18!24;UBERON:0003408!1.73e-18!24;UBERON:0001557!1.73e-18!24;UBERON:0001042!1.73e-18!24;UBERON:0008814!1.73e-18!24;UBERON:0009145!1.73e-18!24;UBERON:0000072!3.46e-16!27;UBERON:0004177!6.43e-15!29;UBERON:0002384!6.77e-13!46;UBERON:0002390!2.13e-12!45;UBERON:0003061!2.13e-12!45;UBERON:0000063!5.58e-12!35;UBERON:0002193!1.86e-11!48;UBERON:0000065!6.66e-10!41;UBERON:0001004!1.29e-09!42;UBERON:0005057!5.52e-09!51;UBERON:0002405!3.09e-08!70;UBERON:0003929!3.73e-08!55;UBERON:0003081!5.00e-08!88;UBERON:0000490!1.37e-07!66;UBERON:0002368!2.83e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.46e-17,46;UBERON:0002370,1.46e-10,23;UBERON:0000974,1.46e-10,23;UBERON:0004807,1.46e-10,23;UBERON:0005058,1.46e-10,23;UBERON:0003351,1.46e-10,23;UBERON:0009113,1.46e-10,23;UBERON:0003295,1.46e-10,23;UBERON:0009722,1.46e-10,23;UBERON:0005562,1.46e-10,23;UBERON:0007690,1.46e-10,23;UBERON:0006562,3.97e-10,24;UBERON:0003408,3.97e-10,24;UBERON:0001557,3.97e-10,24;UBERON:0001042,3.97e-10,24;UBERON:0008814,3.97e-10,24;UBERON:0009145,3.97e-10,24;UBERON:0000072,5.12e-09,27;UBERON:0004177,2.11e-08,29;UBERON:0005057,2.11e-08,29;UBERON:0000077,5.63e-07,35;UBERON:0007811,8.76e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,4.26106967357202,2.111830832275,2.57470978954193,1.54096171402954,0.239316476986009,1.54080656938085,1.22388563386596,0,0,0,0.315462165358238,0.548457734422955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.56360854529097,11.6057942721815,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:133176650..133176677,- | |||
}} |
Latest revision as of 21:46, 4 August 2015
Short description: | p@chr4:133176650..133176677, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:133176650..133176677, - |
Coexpression cluster: | MCL_coexpression_mm9:343 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.46e-17 | 46 |
thymus | 1.46e-10 | 23 |
neck | 1.46e-10 | 23 |
respiratory system epithelium | 1.46e-10 | 23 |
hemolymphoid system gland | 1.46e-10 | 23 |
pharyngeal epithelium | 1.46e-10 | 23 |
thymic region | 1.46e-10 | 23 |
pharyngeal gland | 1.46e-10 | 23 |
entire pharyngeal arch endoderm | 1.46e-10 | 23 |
thymus primordium | 1.46e-10 | 23 |
early pharyngeal endoderm | 1.46e-10 | 23 |
pharynx | 3.97e-10 | 24 |
gland of gut | 3.97e-10 | 24 |
upper respiratory tract | 3.97e-10 | 24 |
chordate pharynx | 3.97e-10 | 24 |
pharyngeal arch system | 3.97e-10 | 24 |
pharyngeal region of foregut | 3.97e-10 | 24 |
segment of respiratory tract | 5.12e-09 | 27 |
hemopoietic organ | 2.11e-08 | 29 |
immune organ | 2.11e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 5.63e-07 | 35 |
craniocervical region | 8.76e-07 | 36 |