FFCP PHASE1:Mm9::chr4:128782748..128782772,+: Difference between revisions
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{{FFCP|EntrezGene=66260|HGNC=|MCL_coexpression_id=12|UniProt=Q9D7S1,A2A7R1,Q9D6Y3|association_with_transcript=-1bp_to_NM_025452,NM_133881,uc008uvz.2,uc008uwa.2_5end|description=CAGE_peak_3_at_Tmem54_5end|id=chr4:128782748..128782772,+|ontology_enrichment_celltype=CL:0002563!6.62e-09!9;CL:0002251!6.62e-09!9;CL:0000239!5.25e-07!6;CL:0000677!5.25e-07!6;CL:0000212!5.25e-07!6;CL:0000584!5.25e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,5.33e-15,9;CL:0002251,5.33e-15,9;CL:0000239,4.50e-14,6;CL:0000677,4.50e-14,6;CL:0000584,4.50e-14,6;CL:0000075,6.06e-12,7;CL:0000066,8.47e-09,25;CL:0002076,2.03e-08,15;CL:0000682,1.42e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.89e-21!43;UBERON:0005409!1.17e-19!59;UBERON:0000344!3.32e-14!15;UBERON:0001242!1.38e-12!13;UBERON:0000060!1.38e-12!13;UBERON:0001262!1.38e-12!13;UBERON:0004786!1.38e-12!13;UBERON:0004923!5.40e-09!24;UBERON:0003350!6.62e-09!9;UBERON:0004808!6.62e-09!9;UBERON:0001277!6.62e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-48,31;UBERON:0005409,3.41e-37,47;UBERON:0000344,4.79e-27,15;UBERON:0001242,2.52e-23,13;UBERON:0001262,2.52e-23,13;UBERON:0004786,2.52e-23,13;UBERON:0004923,7.61e-18,24;UBERON:0003350,5.33e-15,9;UBERON:0004808,5.33e-15,9;UBERON:0001277,5.33e-15,9;UBERON:0001007,6.73e-13,116;UBERON:0001555,6.73e-13,116;UBERON:0007026,6.73e-13,116;UBERON:0004119,1.49e-12,118;UBERON:0000925,1.49e-12,118;UBERON:0006595,1.49e-12,118;UBERON:0000485,5.25e-12,11;UBERON:0004921,4.06e-11,114;UBERON:0002108,1.87e-09,4;UBERON:0000331,1.16e-07,3;UBERON:0002116,1.16e-07,3;UBERON:0001204,1.16e-07,3;UBERON:0001168,1.16e-07,3|phase1_expression=0,19.1936474201649,20.0199665331396,33.875991666365,28.5510566069418,4.70061961353291,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75953779039781,8.94696196161963,13.7815671387605,16.3689558540448,10.5580904016086,15.5819203954227,15.3738379153558,11.7517170647311,0,0,0,0.866554859253824,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0.505524445014783,3.19714863213368,0,0,0,0,0.230615497256059,0,0.117588707135705,0,1.23597483867187,0,0,0,0,0,16.775258509631,0,0,15.3274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1293148088659,15.6025834331491,0,0,0.38660238396628,3.63030344322017,7.11609740303585,15.4082757151173,9.96511029243474,19.4344766574333,15.0801125280162,17.9060824837036,18.5215882763164,11.6846523125049,10.8069024937347,8.76221602319216,0.189667900953082,0.228497025219458,0,0.203651327845314,0.969762435838129,0.0701358198903186,0.442655759869801,0.590440591918409,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0.120625849856312,0.358117032009409,0.328281799490123,9.03590593552537,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.540026704109006,0,1.09181281873089,0.269728692769641,0.41326727862668,0.523511883968059,9.59150802359267,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.665957860122194,0,0.335769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0.25347929989024,0.377252682772152,0.749132059759059,0.448176066834085,0.804096565378586,0.476293691283074,0.463537303779422,0.192909220463705,1.23625770240992,0.294397840268795,0,0.354951612318675,0.238436189947321,0.581385666529314,0.752875043322645,0.0846146078916765,0.365855945745545,0.789209134313529,0.543216455383447,1.68342681497322,0.711810108745045,0.394017929502254,1.22769312950907,0.464810523557898,0,0,0.467863216890817,1.28922632428979,0,0.220591419119515,0|short_description=p3@Tmem54}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66260 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D7S1,uniprot:A2A7R1,uniprot:Q9D6Y3 | |||
|association_with_transcript=-1bp_to_NM_025452,NM_133881,uc008uvz.2,uc008uwa.2_5end | |||
|cluster_id=chr4:128782748..128782772,+ | |||
|description=CAGE_peak_3_at_Tmem54_5end | |||
|id=chr4:128782748..128782772,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.62e-09!9;CL:0002251!6.62e-09!9;CL:0000239!5.25e-07!6;CL:0000677!5.25e-07!6;CL:0000212!5.25e-07!6;CL:0000584!5.25e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.33e-15,9;CL:0002251,5.33e-15,9;CL:0000239,4.50e-14,6;CL:0000677,4.50e-14,6;CL:0000584,4.50e-14,6;CL:0000075,6.06e-12,7;CL:0000066,8.47e-09,25;CL:0002076,2.03e-08,15;CL:0000682,1.42e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.89e-21!43;UBERON:0005409!1.17e-19!59;UBERON:0000344!3.32e-14!15;UBERON:0001242!1.38e-12!13;UBERON:0000060!1.38e-12!13;UBERON:0001262!1.38e-12!13;UBERON:0004786!1.38e-12!13;UBERON:0004923!5.40e-09!24;UBERON:0003350!6.62e-09!9;UBERON:0004808!6.62e-09!9;UBERON:0001277!6.62e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-48,31;UBERON:0005409,3.41e-37,47;UBERON:0000344,4.79e-27,15;UBERON:0001242,2.52e-23,13;UBERON:0001262,2.52e-23,13;UBERON:0004786,2.52e-23,13;UBERON:0004923,7.61e-18,24;UBERON:0003350,5.33e-15,9;UBERON:0004808,5.33e-15,9;UBERON:0001277,5.33e-15,9;UBERON:0001007,6.73e-13,116;UBERON:0001555,6.73e-13,116;UBERON:0007026,6.73e-13,116;UBERON:0004119,1.49e-12,118;UBERON:0000925,1.49e-12,118;UBERON:0006595,1.49e-12,118;UBERON:0000485,5.25e-12,11;UBERON:0004921,4.06e-11,114;UBERON:0002108,1.87e-09,4;UBERON:0000331,1.16e-07,3;UBERON:0002116,1.16e-07,3;UBERON:0001204,1.16e-07,3;UBERON:0001168,1.16e-07,3 | |||
|phase1_expression=0,19.1936474201649,20.0199665331396,33.875991666365,28.5510566069418,4.70061961353291,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75953779039781,8.94696196161963,13.7815671387605,16.3689558540448,10.5580904016086,15.5819203954227,15.3738379153558,11.7517170647311,0,0,0,0.866554859253824,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0.505524445014783,3.19714863213368,0,0,0,0,0.230615497256059,0,0.117588707135705,0,1.23597483867187,0,0,0,0,0,16.775258509631,0,0,15.3274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1293148088659,15.6025834331491,0,0,0.38660238396628,3.63030344322017,7.11609740303585,15.4082757151173,9.96511029243474,19.4344766574333,15.0801125280162,17.9060824837036,18.5215882763164,11.6846523125049,10.8069024937347,8.76221602319216,0.189667900953082,0.228497025219458,0,0.203651327845314,0.969762435838129,0.0701358198903186,0.442655759869801,0.590440591918409,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0.120625849856312,0.358117032009409,0.328281799490123,9.03590593552537,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.540026704109006,0,1.09181281873089,0.269728692769641,0.41326727862668,0.523511883968059,9.59150802359267,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.665957860122194,0,0.335769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0.25347929989024,0.377252682772152,0.749132059759059,0.448176066834085,0.804096565378586,0.476293691283074,0.463537303779422,0.192909220463705,1.23625770240992,0.294397840268795,0,0.354951612318675,0.238436189947321,0.581385666529314,0.752875043322645,0.0846146078916765,0.365855945745545,0.789209134313529,0.543216455383447,1.68342681497322,0.711810108745045,0.394017929502254,1.22769312950907,0.464810523557898,0,0,0.467863216890817,1.28922632428979,0,0.220591419119515,0 | |||
|short_description=p3@Tmem54 | |||
}} |
Revision as of 19:07, 4 August 2015
Short description: | p3@Tmem54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem54_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -1bp_to_NM_025452, NM_133881, uc008uvz.2, uc008uwa.2_5end |
EntrezGene: | 66260 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.33e-15 | 9 |
epithelial cell of alimentary canal | 5.33e-15 | 9 |
brush border epithelial cell | 4.50e-14 | 6 |
gut absorptive cell | 4.50e-14 | 6 |
enterocyte | 4.50e-14 | 6 |
columnar/cuboidal epithelial cell | 6.06e-12 | 7 |
epithelial cell | 8.47e-09 | 25 |
endo-epithelial cell | 2.03e-08 | 15 |
M cell of gut | 1.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.17e-48 | 31 |
gastrointestinal system | 3.41e-37 | 47 |
mucosa | 4.79e-27 | 15 |
intestinal mucosa | 2.52e-23 | 13 |
wall of intestine | 2.52e-23 | 13 |
gastrointestinal system mucosa | 2.52e-23 | 13 |
organ component layer | 7.61e-18 | 24 |
epithelium of mucosa | 5.33e-15 | 9 |
gastrointestinal system epithelium | 5.33e-15 | 9 |
intestinal epithelium | 5.33e-15 | 9 |
digestive system | 6.73e-13 | 116 |
digestive tract | 6.73e-13 | 116 |
primitive gut | 6.73e-13 | 116 |
endoderm-derived structure | 1.49e-12 | 118 |
endoderm | 1.49e-12 | 118 |
presumptive endoderm | 1.49e-12 | 118 |
simple columnar epithelium | 5.25e-12 | 11 |
subdivision of digestive tract | 4.06e-11 | 114 |
small intestine | 1.87e-09 | 4 |
ileal mucosa | 1.16e-07 | 3 |
ileum | 1.16e-07 | 3 |
mucosa of small intestine | 1.16e-07 | 3 |
wall of small intestine | 1.16e-07 | 3 |