FFCP PHASE1:Hg19::chr8:13134045..13134063,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10395 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2897 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDZ8 | |||
|association_with_transcript=0bp_to_ENST00000512044,uc003wwl.1_5end | |||
|coexpression_cluster_id=C2918 | |||
|description=CAGE_peak_5_at_DLC1_5end | |||
|id=chr8:13134045..13134063,- | |||
|ontology_enrichment_celltype=CL:0000055!2.31e-21!180;CL:0000057!4.57e-19!75;CL:0000222!9.19e-19!119;CL:0000183!3.20e-11!59;CL:0000680!7.80e-11!57;CL:0000056!7.80e-11!57;CL:0000355!7.80e-11!57;CL:0000115!1.07e-10!35;CL:0002139!1.12e-10!24;CL:0000187!2.90e-10!54;CL:0000220!4.00e-10!246;CL:0002620!5.28e-10!23;CL:0002321!1.24e-09!248;CL:0000192!3.61e-09!42;CL:0000514!3.61e-09!42;CL:0000071!6.85e-09!18;CL:0002546!6.85e-09!18;CL:0002078!7.85e-09!44;CL:0000213!1.50e-08!57;CL:0000215!1.50e-08!57;CL:0000359!2.74e-08!32;CL:0000393!1.38e-07!60;CL:0000211!1.38e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.59e-12;24!CL:0000115;2.90e-11;36!CL:0002620;4.26e-11;23!CL:0000071;7.42e-10;18!CL:0000057;1.53e-09;73!CL:0000359;5.25e-08;32!CL:0000192;2.47e-07;43!CL:0002078;5.70e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.18e-21,76;CL:0000222,2.79e-20,121;CL:0000115,3.72e-13,36;CL:0002139,5.57e-12,24;CL:0002620,3.27e-11,23;CL:0000680,5.29e-11,58;CL:0000056,5.29e-11,58;CL:0000355,5.29e-11,58;CL:0002078,6.64e-11,45;CL:0000187,2.32e-10,55;CL:0000071,6.12e-10,18;CL:0002546,6.12e-10,18;CL:0000213,6.43e-10,58;CL:0000215,6.43e-10,58;CL:0000192,2.07e-09,43;CL:0000514,2.07e-09,43;CL:0000359,3.31e-08,32;CL:0000393,7.01e-08,61;CL:0000211,7.01e-08,61;CL:0002321,3.59e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;7.42e-10;18!CL:0000514;2.47e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.04e-22!79;UBERON:0007798!9.04e-22!79;UBERON:0003914!3.87e-21!118;UBERON:0000119!5.04e-21!312;UBERON:0000483!4.52e-20!309;UBERON:0000475!2.18e-19!365;UBERON:0000055!2.17e-18!69;UBERON:0000477!2.90e-18!286;UBERON:0004111!1.82e-17!241;UBERON:0005256!2.35e-17!143;UBERON:0001981!2.93e-16!60;UBERON:0007500!2.93e-16!60;UBERON:0004537!2.93e-16!60;UBERON:0006965!2.93e-16!60;UBERON:0000025!8.30e-16!194;UBERON:0000490!3.61e-15!138;UBERON:0001009!3.90e-15!113;UBERON:0004535!7.13e-15!110;UBERON:0004872!1.45e-14!84;UBERON:0001637!9.35e-14!42;UBERON:0003509!9.35e-14!42;UBERON:0004572!9.35e-14!42;UBERON:0000914!1.56e-13!83;UBERON:0002329!1.56e-13!83;UBERON:0003077!1.56e-13!83;UBERON:0003059!1.56e-13!83;UBERON:0007282!1.56e-13!83;UBERON:0009618!1.56e-13!83;UBERON:0007285!1.56e-13!83;UBERON:0002100!1.95e-13!216;UBERON:0000481!4.49e-13!347;UBERON:0000468!7.97e-13!659;UBERON:0000467!3.28e-12!625;UBERON:0004290!3.86e-12!70;UBERON:0000480!5.53e-12!626;UBERON:0000486!7.31e-11!82;UBERON:0004573!3.99e-10!33;UBERON:0004571!3.99e-10!33;UBERON:0003102!1.70e-09!95;UBERON:0001134!2.44e-09!61;UBERON:0002036!2.44e-09!61;UBERON:0003082!2.44e-09!61;UBERON:0002385!4.08e-09!63;UBERON:0001015!4.08e-09!63;UBERON:0000383!4.08e-09!63;UBERON:0001986!6.85e-09!18;UBERON:0004638!6.85e-09!18;UBERON:0004852!6.85e-09!18;UBERON:0000947!1.69e-08!21;UBERON:0010191!1.69e-08!21;UBERON:0002199!2.55e-08!45;UBERON:0002416!2.55e-08!45;UBERON:0003104!7.26e-08!238;UBERON:0009142!7.26e-08!238;UBERON:0000487!1.39e-07!22;UBERON:0002097!4.81e-07!40;UBERON:0006914!7.37e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.29e-10;42!UBERON:0003509;2.29e-10;42!UBERON:0004572;2.29e-10;42!UBERON:0004638;7.42e-10;18!UBERON:0001986;7.42e-10;18!UBERON:0004852;7.42e-10;18!UBERON:0007500;1.27e-09;56!UBERON:0001981;1.27e-09;56!UBERON:0004537;1.27e-09;56!UBERON:0004573;1.47e-09;33!UBERON:0004571;1.47e-09;33!UBERON:0000055;2.17e-09;65!UBERON:0002049;2.40e-09;75!UBERON:0007798;2.40e-09;75!UBERON:0003914;2.49e-09;74!UBERON:0000947;7.50e-09;21!UBERON:0010191;7.50e-09;21!UBERON:0000487;1.20e-08;22!UBERON:0006914;7.39e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.37e-21,78;UBERON:0007798,5.37e-21,78;UBERON:0003914,4.98e-19,117;UBERON:0000055,8.02e-18,68;UBERON:0000119,5.62e-17,309;UBERON:0000483,4.67e-16,306;UBERON:0000490,5.44e-16,148;UBERON:0007500,3.01e-15,59;UBERON:0001981,3.01e-15,59;UBERON:0004537,3.01e-15,59;UBERON:0006965,3.01e-15,59;UBERON:0007503,4.88e-15,78;UBERON:0001637,1.33e-14,42;UBERON:0003509,1.33e-14,42;UBERON:0004572,1.33e-14,42;UBERON:0004111,2.49e-14,240;UBERON:0004535,3.01e-14,109;UBERON:0001009,3.01e-14,112;UBERON:0000025,1.48e-13,192;UBERON:0004872,1.98e-13,83;UBERON:0005256,1.36e-12,122;UBERON:0002329,4.89e-12,71;UBERON:0003059,4.89e-12,71;UBERON:0007282,4.89e-12,71;UBERON:0004290,4.89e-12,71;UBERON:0009618,4.89e-12,71;UBERON:0007524,6.20e-12,73;UBERON:0003077,1.35e-11,72;UBERON:0007285,1.35e-11,72;UBERON:0003104,1.54e-10,160;UBERON:0009142,1.54e-10,160;UBERON:0004573,1.65e-10,33;UBERON:0004571,1.65e-10,33;UBERON:0000486,2.20e-10,83;UBERON:0004638,6.12e-10,18;UBERON:0001986,6.12e-10,18;UBERON:0004852,6.12e-10,18;UBERON:0001134,3.00e-09,62;UBERON:0002036,3.00e-09,62;UBERON:0003082,3.00e-09,62;UBERON:0002100,4.80e-09,199;UBERON:0000947,5.55e-09,21;UBERON:0010191,5.55e-09,21;UBERON:0000487,7.93e-09,22;UBERON:0002385,7.99e-09,64;UBERON:0001015,7.99e-09,64;UBERON:0000383,7.99e-09,64;UBERON:0002199,1.03e-08,46;UBERON:0002416,1.03e-08,46;UBERON:0006914,3.96e-08,25;UBERON:0003102,1.51e-07,99;UBERON:0002097,2.73e-07,41 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.845726424575827,1.0007329835313,0.893922188854576,0,2.53299878168311,1.26343974685366,2.61185628199839,4.91467873003018,2.09340350391728,3.9319446983431,3.9565046734268,1.60896258848061,1.32558950291166,2.6893005858071,3.01347264011988,2.19093027116212,2.43966399395253,0.246242116153576,1.83600622119828,0,0.572471974262113,0,0.87879847716362,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,3.97583067623023,0.50133791063589,1.88300474649071,0.795285947051099,0.486634870302636,0.756278537312543,9.09090529596512,6.76327849837071,1.0478326039817,0.728590576585084,0,0,0,0,0,0,0,4.57153536943422,4.30117297553062,9.37279354340505,5.6530794192401,6.29249154314859,6.87795104850169,4.80688423034664,7.23566925674121,4.26919515224052,7.02913286805807,5.23678112241891,3.80136052859256,2.92874469057803,6.25027236587977,8.91156142669936,5.26868396876071,5.61323431565425,3.71617885594963,3.06633274931766,3.79706263827252,6.04565754970344,0,0,0,8.44852317882041,5.69837302490609,3.97227542439656,3.72887606973458,4.61068896857864,0.560677600142307,5.33744978648525,5.42668606517752,0.933633106199299,3.77189881795127,1.47115712802113,1.36221684880438,4.60940739583999,9.37285727335187,4.05808099879417,6.84566185853339,4.78235777765763,10.5691048779388,9.06488488461537,8.14614678873041,8.9827835352153,6.1417158655884,7.74943358818241,8.31602000097437,2.96720315134268,7.28129089550421,5.03032699271367,5.21841953257605,5.00474079487857,7.48073111807294,3.07284334616587,7.96868269077451,4.8076178850111,2.38207584636044,5.202299434977,3.84403299873421,2.96704661623387,6.00182192168805,6.49230934202165,4.12224864073007,3.53622027030021,4.72573730275545,3.50773218580315,7.57301322732343,4.87864462804187,3.55621325001386,1.42003837006646,2.72030665214629,1.52604533079439,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,5.52539685409922,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,3.69077727312324,2.80483547606892,0,1.47008711385542,5.07020139287323,2.94848165003288,4.72631925345123,0,0.245976877086227,1.88724591328378,0.439001141634502,0,0.502644862058154,0.185176890317059,7.49359102213747,3.11980435583874,4.3299402607582,0,8.45342598497916,3.75352764178792,1.38895653772983,3.42457474022277,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.985143749731331,0.871901815541886,1.15014803749563,18.7212030400459,2.3773077183571,14.3056399723133,15.2767150621979,14.1391525437546,0.317489471460845,0.763976851116555,0,0,0.925447434329912,0,0.285826432630578,5.60655421726804,3.48768055066624,4.32695886343605,4.65378176728,0,3.381211010224,9.30783408047047,7.28052058379563,2.31486636835928,0,3.46348832720929,0.57191197463259,0,0.823240336780769,4.88604276440603,0.710783897485092,0,1.50719688529793,1.74306691720059,0.599837947092342,0,0,0,4.0736225433569,4.59447743336456,7.13184525203592,3.90909528002464,3.08214483825575,1.79060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.33113834266366,3.00102312635806,4.88277042659524,4.99130067673937,5.88815663030634,6.46579901639132,4.68565659970853,1.50473049863859,0,3.10419213877515,7.97070718242524,7.37476674166813,2.86715927744673,0.783204629850962,0.686286847621712,0,0,0,0,0,0.907170879989041,4.21783273291921,4.910783145218,3.08726103876381,3.07533958213682,2.55853624533352,5.62988724002626,0,8.01890407773809,10.1210183428482,6.73442679313235,4.15403543346897,5.34567740915813,0.846016147141356,0.802025881213139,0.276242966807689,1.95184561879831,5.28064387219479,1.70461739447251,3.15839729035188,4.1588282036384,2.35304930753057,1.46139224653261,4.01096189792928,6.8240030442538,6.80374821106063,9.93213214069841,4.62681758070868,5.68987518842091,5.51858751240339,1.78413391131527,0,2.0148727924996,0.219259876645935,0,0,0.328014645699706,1.95227036798582,1.13345112812495,0.183138929636687,0.165018999841176,2.29706215198469,0,0,8.21701105483037,3.69716681075147,3.07007349452259,9.23505035646355,2.79292636657511,2.61030049045611,4.43178462563725,0.979352392114111,0.661139661443912,1.53752053892085,1.14851441245126,0.10115778085555,6.507837690162,10.3888074454111,7.6674099717666,2.7723022215848,3.72614221221915,4.34966496037536,5.93037501132544,2.57624796135584,2.232950216158,5.37845022021834,1.71567174531442,1.02359116524534,2.1396949401696,3.5002357271853,3.92474320099615,2.33834194858309,2.19629623788844,3.41655966802491,3.63928466831969,3.17020642346017,1.26377536871694,1.46290121726877,1.46228093778771,2.11300293513511,4.7774968992795,1.27264888758341,5.65040583101214,3.85955740482287,0.66343897524122,2.19225442626881,1.73632660280006,1.9676842561399,5.88440093191842,3.40805847909725,6.47899885824155,0.717056761020258,0.589494246078727,4.9933947207375,1.77380532035299,1.47775344708365,1.97576935775941,4.17420491142287,4.54915136318478,0.48111056362756,0.670302275535787,0,2.07116361708914,0.86101074534246,5.05414427002877,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,1.4098700508785,0,1.90460633053462,0,0.111443384277478,2.84136146806413,0.47748896947538,1.78178808499583,0,0,1.1253553312841,4.78627431598495,0,0,0.796991953004279,0.552567831062295,0,0,0,8.70910845453061,4.76302261080832,0.179021174675609,0,0.690503839458535,0,5.55684950723184,1.93866549219044,0.649376687132959,0,0.520855522170466,0,1.44999915086959,0.682760689712998,0,0.945550727071745,0,0.291604613383254,0.173624994933292,3.54296554325536,2.17073589525734,3.05163472634166,0.221158519862449,0,1.53569778007781,0,2.09135616417905,0.461701551022782,0.797594390929008,0,0,0.108647371922008,0.31900115973192,6.22863635132664,1.06606955203727,0,0,1.32969345520125,0,0,0,0,1.43042921082341,0.210998064528027,3.7543545876604,0.141353071433941,0.865554558968364,1.99052386215701,0.707660516026713,0.611030144933625,0.296521128680622,0.741383633679017,0.939797545549098,1.88723172345896,0.802577647298789,2.10838001152805,0,0.19566461893209,0.242780379534093,0,2.41981432097328,0,1.20054501294127,1.50323419414493,1.03688191397247,1.99396161812156,0.330991955875499,3.13932918407225,2.38944859545918,0.569219092059585,2.4961441142365,0,0.293977192243133,0,0.52418000472609,0.51595809741485,0,0,0,0.581934098930517,0,0.451961481561065,0,4.37172145746577,1.89932387867636,0.977756913674015,1.76349404553374,0.85381197895741,0,0,0,0,0,4.84584888705187,0,0.543616824294456,1.15063130943567,2.24396078799908,0,2.40168115483916,1.23214841002794,0,0.859530882839914,0,0.837847203816763,0.229160424011684,1.43574604915363,0.798716001995964,3.86303443322914,1.56220020209311,5.64341168888501,5.76479813667846,1.16495949527454,5.987521855349,5.02736736125115,4.58344098208457,0,0.423366660328922,1.59045937961861,0.408610218334727,0,0,0,0,0,1.94398581305679,1.0063040627978,0.551639951094387,0.786818822024972,5.59681783552854,1.25501137532991,4.60596473566669,1.42939065274673,1.98627591109629,0,0,0,0.653174720218818,19.156830649998,0.246277562248017,3.23737241392301,3.39936274560377,2.63794020620548,1.32506888912221,1.42211251997706,2.24795422962573,0,0,2.66968531419237,3.14408610199332,3.31391244277756,0.496166021811951,0,0,0.638341257770182,3.26410682021684,5.013797880454,1.83807346058077,2.29510841496863,0.628216385000937,0,1.22026264901963,2.253436752717,1.14681839138014,0.887432412294818,2.04918129706565,0.138348634936231,0.74988244777264,1.66814029295813,0,0.941063278792687,0,0,5.97019211547496,6.77768598556951,5.54805861502613,2.84104507912634,1.0062716070103,7.11848977277229,2.28840068396924,5.14185140795013,6.06205082272844,1.77426179987561,7.00905775520291,0.449803112163605,5.12367757691656,2.07353103920428,7.97525143673985,5.73919567992907,0.300515217994437,1.52322084867518,5.69619026486526,10.0016762561408,2.68526392606221,6.49647263829891,7.5638218852737,2.00013882331577,3.43395705182793,2.02049693259551,7.57109389371906,2.31143796488764,0,1.82696004375648,0.906823702049089,3.93588206350518,5.62894420364875,10.2080639416448,0,1.09642024789354,6.71418754594348,2.70079653579281,0.675769762612291,0,0,0.911579868532147,1.10606748921385,0,0,0,3.60370833731054,0.491545817507439,0,0,0,0,27.2407657712081,6.44370825881442,0.139879507719444,0,0.127894371303652,0,0.786329709279482,0.436838552768056,0,1.06287460050841,0.991486114072017,4.46915934378595,8.5861174676423,0,0,4.23211132428821,1.8374728641192,3.21146125482298,0,2.39450788585727,1.8460472781668,0,3.04291910842559,0.807378228159255,0,0.785181748008205,0.11796972334774,1.46742878817343,5.89180897366725,4.19520305013884,12.4264786690818,0,0.376051641746286,1.41193548092464,0.781514011233092,0,3.11166643269184,6.2099556211159,3.64702956939331,1.56215619722769,2.27355476151302,1.96589011601111,0,0,1.48863353516788,12.4868583495331,1.02209942111676,0,0,0,0.91064876540519,1.33053555243958,0,0.514464028312255,2.65081958609644,3.15709313101676,1.53651993149159,0,0.627944742804112,1.57115589916002,0.560544326627578,0.913158720509496,0.215927591218621,0,0.929195074296532,0,0,2.60787408453869,1.60342272946051,0.414432328326074,1.0243108625637,1.38251932362818,0.430227358820278,11.9515320737871,12.1003034758004,0.423387050190929,0.68732060563215,1.5510319283216,0.955538938977433,0,2.25745537315059,0.487671699929078,0,0.102662806856247,0,1.45713297917742,0,1.39265542612958,0,0.22589216407792,0,0,1.00326405540328,1.31135736302374,0,0.490296643507811,0.471353094203252,1.17785080268967,0.297046400327086,0.8453114551668,19.7115453037868,2.44358186747619,1.86927875123374,0,0,0.705789743431384,0.320965466756673,2.19100916473955,0,0.573358332605805,0,2.03974470572744,0,1.5870805215462,0.743990036333503,0.924351257262837,2.16313281061895,0,0,0.380095503034311,0.203977659483963,0,0,0,0.378893491091197,0,0,1.75836092965222,0.213233981900981,0.714193294391221,0,0.248298857183432,4.93380195354699,0.318235791390825,0.202117188958219,0.870866991587845,0,0.336760265072938,0.860666464712116,0.665320713092027,1.70946864083046,2.13454691755431,3.8614456457388,1.70667884002515,0,1.1001729976458,0,3.32878387092756,0.603821380773079,0 | |||
|short_description=p5@DLC1 | |||
}} |
Revision as of 20:46, 22 January 2014
Short description: | p5@DLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DLC1_5end |
Coexpression cluster: | C2918_Mast_mesothelioma_spindle_mesodermal_myxofibrosarcoma_lens_neurofibroma |
Association with transcript: | 0bp_to_ENST00000512044, uc003wwl.1_5end |
EntrezGene: | DLC1 |
HGNC: | 2897 |
UniProt: | E9PDZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.18e-21 | 76 |
mesodermal cell | 2.79e-20 | 121 |
endothelial cell | 3.72e-13 | 36 |
endothelial cell of vascular tree | 5.57e-12 | 24 |
skin fibroblast | 3.27e-11 | 23 |
muscle precursor cell | 5.29e-11 | 58 |
myoblast | 5.29e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.29e-11 | 58 |
meso-epithelial cell | 6.64e-11 | 45 |
muscle cell | 2.32e-10 | 55 |
blood vessel endothelial cell | 6.12e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.12e-10 | 18 |
lining cell | 6.43e-10 | 58 |
barrier cell | 6.43e-10 | 58 |
smooth muscle cell | 2.07e-09 | 43 |
smooth muscle myoblast | 2.07e-09 | 43 |
vascular associated smooth muscle cell | 3.31e-08 | 32 |
electrically responsive cell | 7.01e-08 | 61 |
electrically active cell | 7.01e-08 | 61 |
embryonic cell | 3.59e-07 | 250 |