FFCP PHASE1:Hg19::chr7:95114742..95114776,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=51666 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16009 | |||
|TSSclassifier=not | |||
|UniProt=Q9Y574,Q14D68,Q8TBT2 | |||
|association_with_transcript=-436bp_to_ENST00000325885,ENST00000428113,NM_016116,NM_145872_5end | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_4_at_ASB4_5end | |||
|id=chr7:95114742..95114776,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.60e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.60e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3910!4.02e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3910;4.66e-21;2!DOID:3908;2.97e-09;5!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.66e-21,2;DOID:3908,2.97e-09,5;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000007!3.35e-32!2;UBERON:0003296!1.21e-16!4;UBERON:0010133!1.21e-16!4;UBERON:0002336!1.65e-16!1;UBERON:0001018!1.65e-16!1;UBERON:0002473!1.65e-16!1;UBERON:0005340!1.65e-16!1;UBERON:0002316!1.65e-16!1;UBERON:0003544!1.65e-16!1;UBERON:0001020!1.65e-16!1;UBERON:0005970!1.65e-16!1;UBERON:0002437!1.65e-16!1;UBERON:0002022!3.07e-16!1;UBERON:0002780!7.62e-13!41;UBERON:0001890!7.62e-13!41;UBERON:0006240!7.62e-13!41;UBERON:0003080!1.53e-12!42;UBERON:0001894!6.40e-10!7;UBERON:0006222!6.40e-10!7;UBERON:0001049!3.10e-09!57;UBERON:0005068!3.10e-09!57;UBERON:0006241!3.10e-09!57;UBERON:0007135!3.10e-09!57;UBERON:0004903!4.02e-09!2;UBERON:0002173!4.02e-09!2;UBERON:0002186!4.02e-09!2;UBERON:0005162!6.42e-09!2;UBERON:0000122!6.42e-09!2;UBERON:0002616!6.43e-09!59;UBERON:0001954!6.94e-09!2;UBERON:0003022!6.94e-09!2;UBERON:0002421!6.94e-09!2;UBERON:0002600!6.94e-09!2;UBERON:0003056!1.27e-08!61;UBERON:0000945!1.37e-08!8;UBERON:0010039!1.37e-08!8;UBERON:0000955!1.71e-07!69;UBERON:0006238!1.71e-07!69;UBERON:0002791!2.26e-07!33;UBERON:0001893!3.61e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0004903;4.66e-21;2!UBERON:0002173;4.66e-21;2!UBERON:0002186;4.66e-21;2!UBERON:0004821;1.60e-14;3!UBERON:0007499;1.60e-14;3!UBERON:0003215;1.60e-14;3!UBERON:0010368;1.60e-14;3!UBERON:0009911;1.60e-14;3!UBERON:0002299;1.60e-14;3!UBERON:0006524;1.60e-14;3!UBERON:0008874;1.60e-14;3!UBERON:0002169;1.60e-14;3!UBERON:0004894;1.60e-14;3!UBERON:0009856;3.10e-11;4!UBERON:0002368;8.72e-11;33!UBERON:0000949;6.68e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0004903,4.66e-21,2;UBERON:0002173,4.66e-21,2;UBERON:0002186,4.66e-21,2;UBERON:0004821,1.60e-14,3;UBERON:0003215,1.60e-14,3;UBERON:0010368,1.60e-14,3;UBERON:0009911,1.60e-14,3;UBERON:0002299,1.60e-14,3;UBERON:0006524,1.60e-14,3;UBERON:0008874,1.60e-14,3;UBERON:0002169,1.60e-14,3;UBERON:0004894,1.60e-14,3;UBERON:0002368,5.12e-11,35;UBERON:0000949,9.62e-09,45;UBERON:0007499,2.50e-07,25;UBERON:0009856,4.41e-07,26;UBERON:0002530,7.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66062899141805,0,0,0,0,0,0,0,2.32237948940793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687219576995494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,13.9602088974425,12.7490827156727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ASB4 | |||
}} |
Revision as of 18:02, 22 January 2014
Short description: | p4@ASB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_ASB4_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | -436bp_to_ENST00000325885, ENST00000428113, NM_016116, NM_145872_5end |
EntrezGene: | ASB4 |
HGNC: | 16009 |
UniProt: | Q9Y574Q14D68Q8TBT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
bronchoalveolar duct junction | 4.66e-21 | 2 |
alveolar duct | 4.66e-21 | 2 |
bronchiole | 4.66e-21 | 2 |
pulmonary alveolus epithelium | 1.60e-14 | 3 |
alveolus | 1.60e-14 | 3 |
pulmonary lobule | 1.60e-14 | 3 |
lobule | 1.60e-14 | 3 |
alveolus of lung | 1.60e-14 | 3 |
alveolar system | 1.60e-14 | 3 |
pulmonary acinus | 1.60e-14 | 3 |
alveolar sac | 1.60e-14 | 3 |
alveolar wall | 1.60e-14 | 3 |
endocrine gland | 5.12e-11 | 35 |
endocrine system | 9.62e-09 | 45 |
epithelial sac | 2.50e-07 | 25 |
sac | 4.41e-07 | 26 |
gland | 7.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.66e-21 | 2 |
non-small cell lung carcinoma | 2.97e-09 | 5 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |