FFCP PHASE1:Mm9::chr3:118132959..118132992,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=958|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:118132959..118132992,+|id=chr3:118132959..118132992,+|ontology_enrichment_celltype=CL:0000540!2.87e-19!33;CL:0000047!2.87e-19!33;CL:0000031!2.87e-19!33;CL:0000404!2.87e-19!33;CL:0000117!6.64e-18!23;CL:0000337!6.64e-18!23;CL:0002319!1.47e-15!43;CL:0000221!6.30e-15!44;CL:0000133!6.30e-15!44;CL:0000393!1.60e-14!39;CL:0000211!1.60e-14!39;CL:0000055!1.04e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.47e-27,23;CL:0000337,2.47e-27,23;CL:0000540,8.58e-21,33;CL:0000047,8.58e-21,33;CL:0000031,8.58e-21,33;CL:0000404,8.58e-21,33;CL:0000393,1.44e-16,39;CL:0000211,1.44e-16,39;CL:0002319,2.04e-14,43;CL:0000221,6.07e-14,44;CL:0000133,6.07e-14,44;CL:0002609,5.10e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.22e-32!75;UBERON:0001016!1.22e-32!75;UBERON:0001017!5.03e-32!73;UBERON:0005743!5.03e-32!73;UBERON:0001049!9.64e-26!52;UBERON:0005068!9.64e-26!52;UBERON:0006241!9.64e-26!52;UBERON:0007135!9.64e-26!52;UBERON:0002020!1.09e-24!34;UBERON:0000955!1.20e-23!50;UBERON:0006238!1.20e-23!50;UBERON:0002616!7.59e-23!49;UBERON:0003080!4.62e-21!40;UBERON:0004121!8.80e-21!102;UBERON:0000924!8.80e-21!102;UBERON:0006601!8.80e-21!102;UBERON:0002780!1.28e-20!39;UBERON:0001890!1.28e-20!39;UBERON:0006240!1.28e-20!39;UBERON:0002791!3.16e-20!29;UBERON:0003528!3.16e-20!29;UBERON:0001893!3.16e-20!29;UBERON:0002346!6.34e-19!71;UBERON:0003075!6.34e-19!71;UBERON:0007284!6.34e-19!71;UBERON:0000033!9.66e-18!63;UBERON:0003056!3.46e-17!49;UBERON:0000956!5.65e-15!21;UBERON:0001869!5.65e-15!21;UBERON:0000203!5.65e-15!21;UBERON:0002619!2.40e-12!17;UBERON:0002021!5.51e-10!10;UBERON:0000411!5.51e-10!10;UBERON:0001950!5.51e-10!10;UBERON:0007811!5.95e-09!86;UBERON:0000153!4.67e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.01e-39,34;UBERON:0003528,3.44e-32,29;UBERON:0002791,3.44e-32,29;UBERON:0001893,3.44e-32,29;UBERON:0001017,5.20e-31,73;UBERON:0000073,9.13e-31,54;UBERON:0001016,7.11e-30,75;UBERON:0001049,2.00e-28,52;UBERON:0005068,2.00e-28,52;UBERON:0006241,2.00e-28,52;UBERON:0007135,2.00e-28,52;UBERON:0002780,2.67e-26,39;UBERON:0001890,2.67e-26,39;UBERON:0006240,2.67e-26,39;UBERON:0003080,1.95e-25,40;UBERON:0000956,6.87e-23,21;UBERON:0001869,6.87e-23,21;UBERON:0000203,6.87e-23,21;UBERON:0000955,3.41e-22,47;UBERON:0006238,3.41e-22,47;UBERON:0002346,2.83e-21,64;UBERON:0003075,2.83e-21,64;UBERON:0007284,2.83e-21,64;UBERON:0004121,3.71e-21,95;UBERON:0000924,3.71e-21,95;UBERON:0006601,3.71e-21,95;UBERON:0002616,4.73e-21,46;UBERON:0002619,1.29e-20,17;UBERON:0003056,2.88e-19,49;UBERON:0010371,1.79e-17,73;UBERON:0002021,9.04e-16,10;UBERON:0000411,9.04e-16,10;UBERON:0001950,9.04e-16,10;UBERON:0010314,6.02e-12,92;UBERON:0002420,3.31e-10,8;UBERON:0007245,3.31e-10,8;UBERON:0010009,3.31e-10,8;UBERON:0010011,3.31e-10,8;UBERON:0000454,3.31e-10,8;UBERON:0002240,2.01e-09,6;UBERON:0005174,2.01e-09,6;UBERON:0001137,2.01e-09,6;UBERON:0000369,3.87e-09,5;UBERON:0002435,3.87e-09,5;UBERON:0000204,3.87e-09,5;UBERON:0010082,3.87e-09,5;UBERON:0001948,1.58e-08,5;UBERON:0002315,1.58e-08,5;UBERON:0000025,6.14e-08,114;UBERON:0004111,7.26e-07,122|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.89008313664367,0.841299845405528,1.42825492201902,3.09215957332259,5.26710436624302,9.10531974673246,5.51531271966013,1.10115880999389,1.53224805702225,1.38245879930619,8.44072241473241,8.96578907303615,4.68822033501084,0,2.8138130501584,2.90316670775939,3.24091444021034,2.56269025438385,5.59198337475902,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.748953197024114,1.37250180845588,3.76963056338593,3.65031072403781,2.55715457330331,2.90903262383384,3.24482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,4.93942139420565,0,0,0,0.928946687441754,0.515469845288373,0.605050573870028,0.667134131534611,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0.780877488593277,0.215423397732799,0.477937595905104,0.891194696329576,1.13230612315533,0.809621403349789,1.75353514746787,0.395287777946524,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.900305470156551,0.258717367565509,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,3.68260189205742,5.15605962095457,2.92150409984269,1.37016503954128,2.2661816921691,5.40018000185445,2.70192721934532,2.71885445390523,3.62432218226274,0.103787347584177,0.798049746802062,2.56100408631201,1.45864030240976,0.209613162627982,0,1.33348036680969,1.23621034343337,0.320919209591815,0.252697211763798,0.760437899670719,1.32038438970253,1.03005658216871,1.34452820050225,0.516919220600519,0.952587382566147,1.0429589335037,0.964546102318525,1.23625770240992,1.47198920134397,1.37147700954166,1.06485483695602,1.1921809497366,1.0174249164263,0.941093804153306,0.930760686808441,0.914639864363863,0.789209134313529,0.814824683075171,1.12228454331548,0.355905054372522,1.0835493061312,0.409231043169689,0.309873682371932,0.771626443924566,0.499621155875892,0,1.28922632428979,0,0.220591419119515,0|short_description=p@chr3:118132959..118132992,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=958 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:118132959..118132992,+ | |||
|description=CAGE_peak_at_chr3:118132959..118132992,+ | |||
|id=chr3:118132959..118132992,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.87e-19!33;CL:0000047!2.87e-19!33;CL:0000031!2.87e-19!33;CL:0000404!2.87e-19!33;CL:0000117!6.64e-18!23;CL:0000337!6.64e-18!23;CL:0002319!1.47e-15!43;CL:0000221!6.30e-15!44;CL:0000133!6.30e-15!44;CL:0000393!1.60e-14!39;CL:0000211!1.60e-14!39;CL:0000055!1.04e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.47e-27,23;CL:0000337,2.47e-27,23;CL:0000540,8.58e-21,33;CL:0000047,8.58e-21,33;CL:0000031,8.58e-21,33;CL:0000404,8.58e-21,33;CL:0000393,1.44e-16,39;CL:0000211,1.44e-16,39;CL:0002319,2.04e-14,43;CL:0000221,6.07e-14,44;CL:0000133,6.07e-14,44;CL:0002609,5.10e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.22e-32!75;UBERON:0001016!1.22e-32!75;UBERON:0001017!5.03e-32!73;UBERON:0005743!5.03e-32!73;UBERON:0001049!9.64e-26!52;UBERON:0005068!9.64e-26!52;UBERON:0006241!9.64e-26!52;UBERON:0007135!9.64e-26!52;UBERON:0002020!1.09e-24!34;UBERON:0000955!1.20e-23!50;UBERON:0006238!1.20e-23!50;UBERON:0002616!7.59e-23!49;UBERON:0003080!4.62e-21!40;UBERON:0004121!8.80e-21!102;UBERON:0000924!8.80e-21!102;UBERON:0006601!8.80e-21!102;UBERON:0002780!1.28e-20!39;UBERON:0001890!1.28e-20!39;UBERON:0006240!1.28e-20!39;UBERON:0002791!3.16e-20!29;UBERON:0003528!3.16e-20!29;UBERON:0001893!3.16e-20!29;UBERON:0002346!6.34e-19!71;UBERON:0003075!6.34e-19!71;UBERON:0007284!6.34e-19!71;UBERON:0000033!9.66e-18!63;UBERON:0003056!3.46e-17!49;UBERON:0000956!5.65e-15!21;UBERON:0001869!5.65e-15!21;UBERON:0000203!5.65e-15!21;UBERON:0002619!2.40e-12!17;UBERON:0002021!5.51e-10!10;UBERON:0000411!5.51e-10!10;UBERON:0001950!5.51e-10!10;UBERON:0007811!5.95e-09!86;UBERON:0000153!4.67e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.01e-39,34;UBERON:0003528,3.44e-32,29;UBERON:0002791,3.44e-32,29;UBERON:0001893,3.44e-32,29;UBERON:0001017,5.20e-31,73;UBERON:0000073,9.13e-31,54;UBERON:0001016,7.11e-30,75;UBERON:0001049,2.00e-28,52;UBERON:0005068,2.00e-28,52;UBERON:0006241,2.00e-28,52;UBERON:0007135,2.00e-28,52;UBERON:0002780,2.67e-26,39;UBERON:0001890,2.67e-26,39;UBERON:0006240,2.67e-26,39;UBERON:0003080,1.95e-25,40;UBERON:0000956,6.87e-23,21;UBERON:0001869,6.87e-23,21;UBERON:0000203,6.87e-23,21;UBERON:0000955,3.41e-22,47;UBERON:0006238,3.41e-22,47;UBERON:0002346,2.83e-21,64;UBERON:0003075,2.83e-21,64;UBERON:0007284,2.83e-21,64;UBERON:0004121,3.71e-21,95;UBERON:0000924,3.71e-21,95;UBERON:0006601,3.71e-21,95;UBERON:0002616,4.73e-21,46;UBERON:0002619,1.29e-20,17;UBERON:0003056,2.88e-19,49;UBERON:0010371,1.79e-17,73;UBERON:0002021,9.04e-16,10;UBERON:0000411,9.04e-16,10;UBERON:0001950,9.04e-16,10;UBERON:0010314,6.02e-12,92;UBERON:0002420,3.31e-10,8;UBERON:0007245,3.31e-10,8;UBERON:0010009,3.31e-10,8;UBERON:0010011,3.31e-10,8;UBERON:0000454,3.31e-10,8;UBERON:0002240,2.01e-09,6;UBERON:0005174,2.01e-09,6;UBERON:0001137,2.01e-09,6;UBERON:0000369,3.87e-09,5;UBERON:0002435,3.87e-09,5;UBERON:0000204,3.87e-09,5;UBERON:0010082,3.87e-09,5;UBERON:0001948,1.58e-08,5;UBERON:0002315,1.58e-08,5;UBERON:0000025,6.14e-08,114;UBERON:0004111,7.26e-07,122 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.89008313664367,0.841299845405528,1.42825492201902,3.09215957332259,5.26710436624302,9.10531974673246,5.51531271966013,1.10115880999389,1.53224805702225,1.38245879930619,8.44072241473241,8.96578907303615,4.68822033501084,0,2.8138130501584,2.90316670775939,3.24091444021034,2.56269025438385,5.59198337475902,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.748953197024114,1.37250180845588,3.76963056338593,3.65031072403781,2.55715457330331,2.90903262383384,3.24482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,4.93942139420565,0,0,0,0.928946687441754,0.515469845288373,0.605050573870028,0.667134131534611,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0.780877488593277,0.215423397732799,0.477937595905104,0.891194696329576,1.13230612315533,0.809621403349789,1.75353514746787,0.395287777946524,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.900305470156551,0.258717367565509,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,3.68260189205742,5.15605962095457,2.92150409984269,1.37016503954128,2.2661816921691,5.40018000185445,2.70192721934532,2.71885445390523,3.62432218226274,0.103787347584177,0.798049746802062,2.56100408631201,1.45864030240976,0.209613162627982,0,1.33348036680969,1.23621034343337,0.320919209591815,0.252697211763798,0.760437899670719,1.32038438970253,1.03005658216871,1.34452820050225,0.516919220600519,0.952587382566147,1.0429589335037,0.964546102318525,1.23625770240992,1.47198920134397,1.37147700954166,1.06485483695602,1.1921809497366,1.0174249164263,0.941093804153306,0.930760686808441,0.914639864363863,0.789209134313529,0.814824683075171,1.12228454331548,0.355905054372522,1.0835493061312,0.409231043169689,0.309873682371932,0.771626443924566,0.499621155875892,0,1.28922632428979,0,0.220591419119515,0 | |||
|short_description=p@chr3:118132959..118132992,+ | |||
}} |
Latest revision as of 22:38, 5 August 2015
Short description: | p@chr3:118132959..118132992, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:118132959..118132992, + |
Coexpression cluster: | MCL_coexpression_mm9:958 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.47e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.47e-27 | 23 |
neuron | 8.58e-21 | 33 |
neuronal stem cell | 8.58e-21 | 33 |
neuroblast | 8.58e-21 | 33 |
electrically signaling cell | 8.58e-21 | 33 |
electrically responsive cell | 1.44e-16 | 39 |
electrically active cell | 1.44e-16 | 39 |
neural cell | 2.04e-14 | 43 |
ectodermal cell | 6.07e-14 | 44 |
neurectodermal cell | 6.07e-14 | 44 |
neuron of cerebral cortex | 5.10e-07 | 6 |