FFCP PHASE1:Hg19::chr7:27225007..27225030,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=24957 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000522674,NR_002795,uc003syz.1_5end | |||
|coexpression_cluster_id=C2891 | |||
|description=CAGE_peak_2_at_HOXA11-AS1_5end | |||
|id=chr7:27225007..27225030,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.29e-12;10!CL:1000494;1.29e-12;10!CL:1000497;1.50e-11;17!CL:0002518;1.50e-11;17!CL:1000449;3.63e-11;15!CL:0000244;9.08e-08;4!CL:0000731;9.08e-08;4!CL:0002681;2.27e-07;12!CL:0002584;2.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.12e-12,10;CL:1000494,1.12e-12,10;CL:1000497,1.62e-11,17;CL:0002518,1.62e-11,17;CL:1000449,4.24e-11,15;CL:0000244,6.91e-08,4;CL:0000731,6.91e-08,4;CL:0002681,2.83e-07,12;CL:0002584,2.83e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!6.36e-21!45;UBERON:0006554!2.79e-20!44;UBERON:0003064!2.04e-13!37;UBERON:0000489!1.98e-10!32;UBERON:0002113!9.45e-10!27;UBERON:0003918!9.45e-10!27;UBERON:0005095!9.45e-10!27;UBERON:0007687!9.45e-10!27;UBERON:0000162!2.43e-09!14;UBERON:0001353!2.43e-09!14;UBERON:0000163!2.43e-09!14;UBERON:0006866!2.43e-09!14;UBERON:0000164!2.43e-09!14;UBERON:0000931!2.43e-09!14;UBERON:0004122!1.86e-08!15;UBERON:0004876!7.45e-08!20;UBERON:0001046!8.02e-08!19;UBERON:0003937!9.01e-08!12;UBERON:0005399!9.01e-08!12;UBERON:0000080!9.65e-08!18;UBERON:0002120!9.65e-08!18;UBERON:0004875!9.65e-08!18;UBERON:0005721!9.65e-08!18;UBERON:0005754!9.65e-08!18;UBERON:0007297!9.65e-08!18;UBERON:0005156!3.67e-07!59;UBERON:0000990!3.67e-07!59;UBERON:0006555!4.24e-07!17;UBERON:0005103!4.24e-07!17;UBERON:0000083!4.24e-07!17;UBERON:0009201!4.24e-07!17;UBERON:0004819!4.24e-07!17;UBERON:0006553!4.24e-07!17;UBERON:0003074!4.24e-07!17;UBERON:0003060!4.24e-07!17;UBERON:0002367!4.43e-07!11;UBERON:0010147!4.43e-07!11;UBERON:0009846!4.43e-07!11;UBERON:0003353!4.43e-07!11;UBERON:0004902!4.43e-07!11;UBERON:0003820!4.43e-07!11;UBERON:0009847!4.43e-07!11;UBERON:0003101!5.12e-07!22;UBERON:0000079!5.12e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.45e-19;30!UBERON:0001008;1.45e-19;30!UBERON:0004211;1.29e-12;10!UBERON:0009773;1.29e-12;10!UBERON:0001231;1.29e-12;10!UBERON:0004810;1.29e-12;10!UBERON:0000489;2.28e-12;29!UBERON:0002113;3.57e-12;24!UBERON:0011143;3.57e-12;24!UBERON:0003937;6.19e-12;12!UBERON:0005399;6.19e-12;12!UBERON:0006555;3.63e-11;15!UBERON:0004819;3.63e-11;15!UBERON:0001285;3.63e-11;15!UBERON:0007684;3.63e-11;15!UBERON:0002367;6.50e-11;11!UBERON:0010147;6.50e-11;11!UBERON:0010260;1.56e-09;9!UBERON:0001737;7.98e-09;9!UBERON:0001557;7.98e-09;9!UBERON:0000365;9.34e-09;5!UBERON:0003101;6.14e-08;22!UBERON:0000079;6.14e-08;22!UBERON:0001225;2.27e-07;12!UBERON:0008987;2.27e-07;12!UBERON:0005910;3.41e-07;6!UBERON:0001638;4.00e-07;9!UBERON:0003920;4.00e-07;9!UBERON:0004582;4.00e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,1.71e-28,48;UBERON:0006554,1.60e-27,47;UBERON:0003064,1.47e-15,28;UBERON:0000489,3.00e-14,31;UBERON:0000162,3.16e-14,14;UBERON:0001353,3.16e-14,14;UBERON:0000163,3.16e-14,14;UBERON:0006866,3.16e-14,14;UBERON:0000164,3.16e-14,14;UBERON:0000931,3.16e-14,14;UBERON:0002113,4.24e-14,26;UBERON:0003918,4.24e-14,26;UBERON:0011143,4.24e-14,26;UBERON:0005095,4.24e-14,26;UBERON:0007687,4.24e-14,26;UBERON:0004122,4.57e-13,15;UBERON:0004810,1.12e-12,10;UBERON:0006555,3.38e-12,16;UBERON:0004819,3.38e-12,16;UBERON:0003104,4.28e-12,160;UBERON:0009142,4.28e-12,160;UBERON:0003937,8.94e-12,12;UBERON:0005399,8.94e-12,12;UBERON:0004211,4.24e-11,15;UBERON:0009773,4.24e-11,15;UBERON:0001231,4.24e-11,15;UBERON:0001285,4.24e-11,15;UBERON:0007684,4.24e-11,15;UBERON:0004208,4.24e-11,15;UBERON:0002367,1.07e-10,11;UBERON:0010147,1.07e-10,11;UBERON:0009846,1.07e-10,11;UBERON:0003353,1.07e-10,11;UBERON:0004902,1.07e-10,11;UBERON:0003820,1.07e-10,11;UBERON:0009847,1.07e-10,11;UBERON:0001046,1.15e-09,19;UBERON:0010260,3.40e-09,9;UBERON:0001737,5.60e-09,9;UBERON:0000365,5.90e-09,5;UBERON:0003101,5.95e-08,22;UBERON:0000079,5.95e-08,22;UBERON:0005910,2.35e-07,6;UBERON:0001225,2.83e-07,12;UBERON:0008987,2.83e-07,12;UBERON:0001638,3.26e-07,9;UBERON:0003920,3.26e-07,9;UBERON:0004582,3.26e-07,9 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0.872338524100369,2.53299878168311,0,1.82829939739887,0,0,0,0,0.495065411840187,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,5.51471701699479,2.60723734129483,0.795285947051099,1.94653948121054,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0.805658634218294,0,0.732186172644509,0,0.81014194788176,1.07159673940896,0.673588117878509,1.57656072676651,1.53316637465883,1.89853131913626,1.83201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,1.64393548606981,0.939475989150119,0,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0.85422955527427,1.27159140695737,1.20036438433761,1.33968288009971,1.28820270022815,3.16398655763703,0.506328996723799,1.26668106709558,2.52433774244115,2.57739716198438,0,1.06502877754984,1.5112814734146,2.7129694769678,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,1.53798840051797,1.68584690078102,1.68707720918437,1.43382164552112,1.74303555273925,1.18635309555548,1.8876383142423,2.35465758150415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,1.55126058909333,25.0359512096318,0.845302752556,3.72313363218819,6.24044621468197,4.8869401109807,1.41849132023278,3.19706614819319,0,14.650783345569,7.40916303102692,0.325736184293735,0,3.16780749173372,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,2.05476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0,0,0,0,0.902838299183157,4.5481500811197,7.24311499047534,0.664225598535437,0.184369168541703,4.95236602468072,0,0,0,0,0,0,0,0,0,0,0.841980283299221,0,0,0,0,0.154209693802656,0.710246901252508,0.246381468041427,0,0.116210378459959,0,2.80709058424599,2.02578175658972,1.49258782613989,3.27764102412091,3.01586154406675,4.06079651616671,1.5403067420883,4.70609861506113,4.38417673959782,2.74434235121477,1.13733384070897,0,1.29549549661284,0,2.98041081298238,5.51858751240339,0,2.49322802678617,3.1342465661105,0,0,0,0,0,0,0.824125183365091,1.07262349896764,0,0,0,1.16004861950546,0.154048617114644,0,0.137836572484531,0.537101224341368,1.0151168573996,0,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,2.87795932133304,2.47083326762449,2.5918728516051,0.202182481573316,0,0,0,0.243713489631284,0,2.45699840534374,4.24216295861138,0,0,0,0,0,0,1.01455188481352,3.0982349809975,1.69017361519345,2.43799298746888,3.242218353433,1.07001315444375,3.90237170477658,0.211107635297664,0.658589785919804,0,0,0,0,0,0.0941438007767792,6.45758059006845,3.36942951335251,8.86860307073351,2.98640420269047,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0,0,0,0,0,0,0.846694330895531,0.649243880549111,0,0.684704037099577,0.156679895773023,2.50634477090067,0.846458889008016,0.1605880751037,0.403599414382095,2.98092366383228,0,4.30137070031841,6.93395934466489,3.67068111766199,10.1601809609061,0,0,0,0,0,6.54991891428769,0,0,0,2.84136146806413,0,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,4.24166644238815,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,1.25481369850743,7.61807559187591,0,0,0,0,0,3.48070854927077,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,4.42287822516696,6.72133159426988,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,2.55549813004637,6.22129148383483,0,0,0,0,0,0,0.694238953340524,0,0,1.92199335066233,2.0638323896594,0.774050650312681,0.803982487948041,0.574808199372465,0,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0.144090417154106,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,3.09482069996489,0,0,1.72723677587501,0,0,0,4.88699641578341,3.45688596480507,3.91904832131291,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,3.1304703708704,0,0.380805212168795,0,0,0.214821114084977,0,1.59238355479446,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,1.92045113449454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.52552838186867,0,0.795664888465099,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,2.11339663594931,4.16013392107724,0,0.560544326627578,0,0,3.8220135030964,0,0,0.116241425368125,1.91244099532837,4.00855682365126,0,0,0,0,0.473328002922261,0.170426809518315,1.69354820076372,0,0,0,0,0,0,1.29485767437579,2.15591894398119,2.3196288626764,0,0,5.76957247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| |||
|short_description=p2@HOXA11-AS1 | |||
}} |
Revision as of 16:14, 22 January 2014
Short description: | p2@HOXA11-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXA11-AS1_5end |
Coexpression cluster: | C2891_Mesenchymal_uterus_smallcell_small_leiomyoma_cervix_acute |
Association with transcript: | 0bp_to_ENST00000522674, NR_002795, uc003syz.1_5end |
EntrezGene: | HOXA11-AS1 |
HGNC: | 24957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.12e-12 | 10 |
nephron tubule epithelial cell | 1.12e-12 | 10 |
kidney cell | 1.62e-11 | 17 |
kidney epithelial cell | 1.62e-11 | 17 |
epithelial cell of nephron | 4.24e-11 | 15 |
transitional epithelial cell | 6.91e-08 | 4 |
urothelial cell | 6.91e-08 | 4 |
kidney cortical cell | 2.83e-07 | 12 |
renal cortical epithelial cell | 2.83e-07 | 12 |