FFCP PHASE1:Mm9::chr2:160713892..160713935,+: Difference between revisions
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{{FFCP|EntrezGene=64899|HGNC=|MCL_coexpression_id=12|UniProt=A2A4B1,Q149B0,Q99PI4|association_with_transcript=0bp_to_ENSMUST00000109457,NM_001199118,uc008nri.2,uc008nrj.2_5end|description=CAGE_peak_1_at_Lpin3_5end|id=chr2:160713892..160713935,+|ontology_enrichment_celltype=CL:0000066!3.38e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.93e-08,25;CL:0002563,9.77e-08,9;CL:0002251,9.77e-08,9;CL:0000075,5.97e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.23e-18!130;UBERON:0000925!2.23e-18!130;UBERON:0006595!2.23e-18!130;UBERON:0000160!6.70e-18!43;UBERON:0005409!1.63e-17!59;UBERON:0001007!1.71e-17!128;UBERON:0001555!1.71e-17!128;UBERON:0007026!1.71e-17!128;UBERON:0004921!2.87e-16!126;UBERON:0004185!2.87e-16!126;UBERON:0000344!1.70e-10!15;UBERON:0001242!4.16e-09!13;UBERON:0000060!4.16e-09!13;UBERON:0001262!4.16e-09!13;UBERON:0004786!4.16e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.30e-21,31;UBERON:0005409,2.11e-20,47;UBERON:0004119,7.74e-16,118;UBERON:0000925,7.74e-16,118;UBERON:0006595,7.74e-16,118;UBERON:0001007,6.83e-15,116;UBERON:0001555,6.83e-15,116;UBERON:0007026,6.83e-15,116;UBERON:0004921,1.36e-13,114;UBERON:0000344,6.35e-13,15;UBERON:0001242,3.70e-11,13;UBERON:0001262,3.70e-11,13;UBERON:0004786,3.70e-11,13;UBERON:0004923,5.71e-09,24;UBERON:0003350,9.77e-08,9;UBERON:0004808,9.77e-08,9;UBERON:0001277,9.77e-08,9;UBERON:0000485,4.21e-07,11|phase1_expression=0.960893082628764,26.8711063882308,15.0149748998547,35.3883127228991,36.5653882860833,9.23335995515394,7.70921713965235,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,16.7992043933077,18.5821517664408,13.2073351746455,8.61523992318149,10.7735616342945,17.4821545899864,14.617747526076,14.8559442139054,0.635030673459631,1.84519436275371,15.8481681015439,4.91047753577167,2.32728503501889,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0,0,0,1.15945795480671,1.72084775396277,0.679971333707751,1.61910957491345,1.94932925234301,1.34408066129201,1.82577746171277,0,0,0,3.23939865486365,0,0,0,3.46385665617943,4.30711771307668,3.53867111510348,2.8545969929765,0,0,0,0.304465478312141,0,0,0,0.125666591329675,8.40462890296871,0,0,0.161766849947409,0,0,9.31958806090611,0.585561594023094,0.628340120440365,12.0064815948038,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.995255764880744,6.06534620240819,5.05060454127538,0.520481771850815,0.229902104433473,0.540186389416048,0.452114453507145,0.476255494059295,0,0.562210347358373,2.58703370739016,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0.556094498451196,0.696504333044333,1.23469281844766,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.329119699826961,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0.205809224758569,26.4335026387038,12.164726066523,0.639864751605702,0.928946687441754,3.35055399437443,6.05050573870028,7.33847544688072,7.60902504450237,7.11793592316767,9.88193728344065,6.78605063760728,11.5394753783867,6.62877896205008,18.8752075817387,11.4553166433588,15.3338780405863,1.13800740571849,1.14248512609729,1.1270773567308,1.62921062276251,1.35766741017338,2.73529697572242,2.71917109634306,3.09981310757165,3.29697328466887,4.68909222902842,0.592905254174298,0,0,0,0.202860121388503,0.964708639009667,0.50925170356284,0.287696137450811,1.45921704097532,1.09824565275233,1.43768206527355,1.11642284300551,0.936113019343682,1.76805214562978,2.51156378930677,0.964887042726734,2.77129785249907,0.189491411770485,1.30371981153621,1.35796068620151,0.704070744865506,3.51763140627813,3.33261097240419,2.14647012643579,0.788175720530955,1.10732344824387,0.478364305972461,1.14704320301017,1.55416483679306,2.60368305446721,0,0,0.983528546038072,1.65562047782839,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.712262414669021,1.46598263418218,2.14461159864296,1.32745138339963,1.45668381692989,1.209294227859,1.88605079755898,1.18120757152309,0.922305443831782,2.84271122485043,3.27180356529755,1.06949213515416,0.632073515871632,2.10837217149998,0,4.08527526904546,1.26042765821917,2.32845630808958,2.14337035031592,2.12808280370728,1.42695054081656,0.658196082408484,1.522324745573,2.58138878870081,5.93129798418696,3.08739757276947,2.63818004706368,1.45317984026315,2.53314284698255,2.50681922406587,3.77524069413641,11.0762717919343,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,8.59203556213602,1.10717597753397,2.03319467126849,2.70013352054503,3.13632444021703,3.05707589244649,3.10187996685088,4.29797969771747,4.71160695571253,11.9245775428449,1.86401793926078,0,0.747582730219894,1.82004339502807,2.72231663681667,1.16243841129958,1.01373675294467,1.05621514781179,1.0416350787516,2.30690557736564,1.44950472495604,0.576060012515731,0.316011120628178,0.405450430580328,1.54066435747241,0.77952493786677,1.07416017400489,0.39736270956253,0.721172697119813,0.590758108698309,0.302899349844443,0.457240839929999,0,0.0974578807397524,0.288635524920988,0.584384510907845,2.72076460338254,5.99362074109975,3.58855426437903,2.85403847818933,6.95482538515886,0.93841237725591,4.2124873581471,4.07299920250225,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.682934423016537,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,1.77435509923168,1.69763707247469,0.280924522409647,0.768301828858431,0.861532034334199,0.476293691283074,0.463537303779422,0.38581844092741,1.23625770240992,0.147198920134397,1.37147700954166,0.354951612318675,0.953744759789284,0,1.12931256498397,0.761531471025089,1.28049581010941,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.788035859004508,0,1.08455788830176,0.385813221962283,0.249810577937946,0.935726433781634,1.71896843238639,0,0.661774257358546,0|short_description=p1@Lpin3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64899 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A4B1,uniprot:Q149B0,uniprot:Q99PI4 | |||
|association_with_transcript=0bp_to_ENSMUST00000109457,NM_001199118,uc008nri.2,uc008nrj.2_5end | |||
|cluster_id=chr2:160713892..160713935,+ | |||
|description=CAGE_peak_1_at_Lpin3_5end | |||
|id=chr2:160713892..160713935,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.38e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.93e-08,25;CL:0002563,9.77e-08,9;CL:0002251,9.77e-08,9;CL:0000075,5.97e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.23e-18!130;UBERON:0000925!2.23e-18!130;UBERON:0006595!2.23e-18!130;UBERON:0000160!6.70e-18!43;UBERON:0005409!1.63e-17!59;UBERON:0001007!1.71e-17!128;UBERON:0001555!1.71e-17!128;UBERON:0007026!1.71e-17!128;UBERON:0004921!2.87e-16!126;UBERON:0004185!2.87e-16!126;UBERON:0000344!1.70e-10!15;UBERON:0001242!4.16e-09!13;UBERON:0000060!4.16e-09!13;UBERON:0001262!4.16e-09!13;UBERON:0004786!4.16e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.30e-21,31;UBERON:0005409,2.11e-20,47;UBERON:0004119,7.74e-16,118;UBERON:0000925,7.74e-16,118;UBERON:0006595,7.74e-16,118;UBERON:0001007,6.83e-15,116;UBERON:0001555,6.83e-15,116;UBERON:0007026,6.83e-15,116;UBERON:0004921,1.36e-13,114;UBERON:0000344,6.35e-13,15;UBERON:0001242,3.70e-11,13;UBERON:0001262,3.70e-11,13;UBERON:0004786,3.70e-11,13;UBERON:0004923,5.71e-09,24;UBERON:0003350,9.77e-08,9;UBERON:0004808,9.77e-08,9;UBERON:0001277,9.77e-08,9;UBERON:0000485,4.21e-07,11 | |||
|phase1_expression=0.960893082628764,26.8711063882308,15.0149748998547,35.3883127228991,36.5653882860833,9.23335995515394,7.70921713965235,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,16.7992043933077,18.5821517664408,13.2073351746455,8.61523992318149,10.7735616342945,17.4821545899864,14.617747526076,14.8559442139054,0.635030673459631,1.84519436275371,15.8481681015439,4.91047753577167,2.32728503501889,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0,0,0,1.15945795480671,1.72084775396277,0.679971333707751,1.61910957491345,1.94932925234301,1.34408066129201,1.82577746171277,0,0,0,3.23939865486365,0,0,0,3.46385665617943,4.30711771307668,3.53867111510348,2.8545969929765,0,0,0,0.304465478312141,0,0,0,0.125666591329675,8.40462890296871,0,0,0.161766849947409,0,0,9.31958806090611,0.585561594023094,0.628340120440365,12.0064815948038,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.995255764880744,6.06534620240819,5.05060454127538,0.520481771850815,0.229902104433473,0.540186389416048,0.452114453507145,0.476255494059295,0,0.562210347358373,2.58703370739016,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0.556094498451196,0.696504333044333,1.23469281844766,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.329119699826961,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0.205809224758569,26.4335026387038,12.164726066523,0.639864751605702,0.928946687441754,3.35055399437443,6.05050573870028,7.33847544688072,7.60902504450237,7.11793592316767,9.88193728344065,6.78605063760728,11.5394753783867,6.62877896205008,18.8752075817387,11.4553166433588,15.3338780405863,1.13800740571849,1.14248512609729,1.1270773567308,1.62921062276251,1.35766741017338,2.73529697572242,2.71917109634306,3.09981310757165,3.29697328466887,4.68909222902842,0.592905254174298,0,0,0,0.202860121388503,0.964708639009667,0.50925170356284,0.287696137450811,1.45921704097532,1.09824565275233,1.43768206527355,1.11642284300551,0.936113019343682,1.76805214562978,2.51156378930677,0.964887042726734,2.77129785249907,0.189491411770485,1.30371981153621,1.35796068620151,0.704070744865506,3.51763140627813,3.33261097240419,2.14647012643579,0.788175720530955,1.10732344824387,0.478364305972461,1.14704320301017,1.55416483679306,2.60368305446721,0,0,0.983528546038072,1.65562047782839,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.712262414669021,1.46598263418218,2.14461159864296,1.32745138339963,1.45668381692989,1.209294227859,1.88605079755898,1.18120757152309,0.922305443831782,2.84271122485043,3.27180356529755,1.06949213515416,0.632073515871632,2.10837217149998,0,4.08527526904546,1.26042765821917,2.32845630808958,2.14337035031592,2.12808280370728,1.42695054081656,0.658196082408484,1.522324745573,2.58138878870081,5.93129798418696,3.08739757276947,2.63818004706368,1.45317984026315,2.53314284698255,2.50681922406587,3.77524069413641,11.0762717919343,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,8.59203556213602,1.10717597753397,2.03319467126849,2.70013352054503,3.13632444021703,3.05707589244649,3.10187996685088,4.29797969771747,4.71160695571253,11.9245775428449,1.86401793926078,0,0.747582730219894,1.82004339502807,2.72231663681667,1.16243841129958,1.01373675294467,1.05621514781179,1.0416350787516,2.30690557736564,1.44950472495604,0.576060012515731,0.316011120628178,0.405450430580328,1.54066435747241,0.77952493786677,1.07416017400489,0.39736270956253,0.721172697119813,0.590758108698309,0.302899349844443,0.457240839929999,0,0.0974578807397524,0.288635524920988,0.584384510907845,2.72076460338254,5.99362074109975,3.58855426437903,2.85403847818933,6.95482538515886,0.93841237725591,4.2124873581471,4.07299920250225,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.682934423016537,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,1.77435509923168,1.69763707247469,0.280924522409647,0.768301828858431,0.861532034334199,0.476293691283074,0.463537303779422,0.38581844092741,1.23625770240992,0.147198920134397,1.37147700954166,0.354951612318675,0.953744759789284,0,1.12931256498397,0.761531471025089,1.28049581010941,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.788035859004508,0,1.08455788830176,0.385813221962283,0.249810577937946,0.935726433781634,1.71896843238639,0,0.661774257358546,0 | |||
|short_description=p1@Lpin3 | |||
}} |
Revision as of 10:45, 4 August 2015
Short description: | p1@Lpin3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lpin3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000109457, NM_001199118, uc008nri.2, uc008nrj.2_5end |
EntrezGene: | 64899 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.93e-08 | 25 |
intestinal epithelial cell | 9.77e-08 | 9 |
epithelial cell of alimentary canal | 9.77e-08 | 9 |
columnar/cuboidal epithelial cell | 5.97e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.30e-21 | 31 |
gastrointestinal system | 2.11e-20 | 47 |
endoderm-derived structure | 7.74e-16 | 118 |
endoderm | 7.74e-16 | 118 |
presumptive endoderm | 7.74e-16 | 118 |
digestive system | 6.83e-15 | 116 |
digestive tract | 6.83e-15 | 116 |
primitive gut | 6.83e-15 | 116 |
subdivision of digestive tract | 1.36e-13 | 114 |
mucosa | 6.35e-13 | 15 |
intestinal mucosa | 3.70e-11 | 13 |
wall of intestine | 3.70e-11 | 13 |
gastrointestinal system mucosa | 3.70e-11 | 13 |
organ component layer | 5.71e-09 | 24 |
epithelium of mucosa | 9.77e-08 | 9 |
gastrointestinal system epithelium | 9.77e-08 | 9 |
intestinal epithelium | 9.77e-08 | 9 |
simple columnar epithelium | 4.21e-07 | 11 |