FFCP PHASE1:Hg19::chr6:66417056..66417092,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21555 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T1H1 | |||
|association_with_transcript=14bp_to_ENST00000370618,ENST00000370621,ENST00000489873_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_EYS_5end | |||
|id=chr6:66417056..66417092,- | |||
|ontology_enrichment_celltype=CL:0000240!2.23e-10!6;CL:0000311!2.23e-10!6;CL:0000079!2.23e-10!6;CL:0000237!2.23e-10!6;CL:0000036!2.23e-10!6;CL:0000357!2.23e-10!6;CL:0000114!2.23e-10!6;CL:0000242!6.94e-09!2;CL:0002319!8.41e-08!25;CL:0000312!1.81e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.42e-07;2!CL:0000123;6.99e-07;2!CL:0000242;6.99e-07;2!CL:0002319;8.00e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.42e-07,2;CL:0000242,6.80e-07,2;CL:0002319,8.19e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.26e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;9.28e-10;5!DOID:3119;1.35e-07;14!DOID:154;8.77e-07;2!DOID:4236;8.77e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,9.28e-10,5;DOID:3119,1.37e-07,14;DOID:154,9.02e-07,2;DOID:4236,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003296!3.15e-16!4;UBERON:0010133!3.15e-16!4;UBERON:0004121!1.50e-15!169;UBERON:0000924!5.12e-15!173;UBERON:0006601!5.12e-15!173;UBERON:0000073!1.56e-14!94;UBERON:0001016!1.56e-14!94;UBERON:0005743!2.18e-13!86;UBERON:0001017!1.12e-12!82;UBERON:0003056!2.09e-11!61;UBERON:0002780!5.86e-10!41;UBERON:0001890!5.86e-10!41;UBERON:0006240!5.86e-10!41;UBERON:0003080!1.14e-09!42;UBERON:0000955!1.71e-09!69;UBERON:0006238!1.71e-09!69;UBERON:0001950!1.83e-09!20;UBERON:0003075!2.14e-09!86;UBERON:0007284!2.14e-09!86;UBERON:0001905!2.41e-09!2;UBERON:0002757!2.41e-09!2;UBERON:0010134!2.41e-09!2;UBERON:0002784!2.41e-09!2;UBERON:0005408!2.41e-09!2;UBERON:0001899!2.41e-09!2;UBERON:0001894!2.79e-09!7;UBERON:0006222!2.79e-09!7;UBERON:0000153!3.21e-09!129;UBERON:0007811!3.21e-09!129;UBERON:0000033!6.67e-09!123;UBERON:0002346!8.32e-09!90;UBERON:0000007!1.33e-08!2;UBERON:0002619!1.56e-08!22;UBERON:0001876!2.61e-08!2;UBERON:0001049!8.83e-08!57;UBERON:0005068!8.83e-08!57;UBERON:0006241!8.83e-08!57;UBERON:0007135!8.83e-08!57;UBERON:0000076!1.86e-07!8;UBERON:0002616!1.97e-07!59;UBERON:0000956!2.08e-07!25;UBERON:0000203!2.08e-07!25;UBERON:0001871!2.54e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.38e-24;2!UBERON:0002757;6.38e-24;2!UBERON:0010134;6.38e-24;2!UBERON:0005408;6.38e-24;2!UBERON:0001899;6.38e-24;2!UBERON:0003296;1.86e-12;4!UBERON:0010133;1.86e-12;4!UBERON:0002784;1.86e-12;4!UBERON:0000966;6.22e-10;5!UBERON:0005388;6.22e-10;5!UBERON:0001802;6.22e-10;5!UBERON:0000002;2.81e-08;6!UBERON:0001560;2.81e-08;6!UBERON:0001894;1.72e-07;7!UBERON:0006955;6.42e-07;2!UBERON:0004801;6.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.38e-24,2;UBERON:0002757,6.38e-24,2;UBERON:0010134,6.38e-24,2;UBERON:0005408,6.38e-24,2;UBERON:0001899,6.38e-24,2;UBERON:0003296,1.86e-12,4;UBERON:0010133,1.86e-12,4;UBERON:0002784,1.86e-12,4;UBERON:0000966,2.02e-08,6;UBERON:0005388,2.02e-08,6;UBERON:0001802,2.02e-08,6;UBERON:0000002,2.81e-08,6;UBERON:0001560,2.81e-08,6;UBERON:0001894,1.72e-07,7;UBERON:0006222,1.72e-07,7;UBERON:0006955,6.42e-07,2;UBERON:0004801,6.42e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.555530670951178,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,35.2705846995986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82640722538051,1.16641845353302,4.34062487333231,0,0,0,0,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.3476637167952,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,66.6840420392632,0.124980407962107,0,0,0,26.6950896309923,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.850229498565,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,203.030995797871,151.66395872069,0.606965604236632,0.91064876540519,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,18.9412842068139,97.8104256625578,0,0,0,0,1.87790324803345,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,8.1569817816161,0,0,26.385724018903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@EYS | |||
}} |
Revision as of 12:31, 22 January 2014
Short description: | p1@EYS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EYS_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 14bp_to_ENST00000370618, ENST00000370621, ENST00000489873_5end |
EntrezGene: | EYS |
HGNC: | 21555 |
UniProt: | Q5T1H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.42e-07 | 2 |
Merkel cell | 6.80e-07 | 2 |
neural cell | 8.19e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.38e-24 | 2 |
regional part of epithalamus | 6.38e-24 | 2 |
secretory circumventricular organ | 6.38e-24 | 2 |
circumventricular organ | 6.38e-24 | 2 |
epithalamus | 6.38e-24 | 2 |
gland of diencephalon | 1.86e-12 | 4 |
neuroendocrine gland | 1.86e-12 | 4 |
regional part of diencephalon | 1.86e-12 | 4 |
retina | 2.02e-08 | 6 |
photoreceptor array | 2.02e-08 | 6 |
posterior segment of eyeball | 2.02e-08 | 6 |
uterine cervix | 2.81e-08 | 6 |
neck of organ | 2.81e-08 | 6 |
diencephalon | 1.72e-07 | 7 |
future diencephalon | 1.72e-07 | 7 |
uterine epithelium | 6.42e-07 | 2 |
cervix epithelium | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 9.28e-10 | 5 |
gastrointestinal system cancer | 1.37e-07 | 14 |
mixed cell type cancer | 9.02e-07 | 2 |
carcinosarcoma | 9.02e-07 | 2 |