FFCP PHASE1:Hg19::chr6:43858766..43858801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100132354 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_NR_024478,uc011dvm.1_5end | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_1_at_LOC100132354_5end | |||
|id=chr6:43858766..43858801,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.51e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.19e-08;2!CL:0000242;5.19e-08;2!CL:0002253;7.52e-08;2!CL:0002535;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.02e-08,2;CL:0002535,8.04e-08,2;CL:0002253,9.19e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!1.51e-08!4;DOID:3095!2.31e-08!22;DOID:2994!2.31e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.81e-15;14!DOID:0050619;5.42e-15;1!DOID:1357;5.42e-15;1!DOID:5409;2.26e-14;4!DOID:1325;1.32e-08;7!DOID:3904;1.32e-08;7!DOID:0050615;3.60e-08;16!DOID:3493;5.19e-08;2!DOID:3905;7.00e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.22e-15,14;DOID:0050619,5.42e-15,1;DOID:1357,5.42e-15,1;DOID:5409,2.26e-14,4;DOID:1325,1.32e-08,7;DOID:3904,1.32e-08,7;DOID:0050615,3.60e-08,16;DOID:3493,5.37e-08,2;DOID:305,2.87e-07,106;DOID:3905,7.00e-07,9;DOID:0050686,8.45e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.66e-18!32;UBERON:0002619!7.01e-18!22;UBERON:0001893!3.04e-17!34;UBERON:0001950!1.67e-16!20;UBERON:0002791!1.59e-15!33;UBERON:0000956!1.66e-15!25;UBERON:0000203!1.66e-15!25;UBERON:0002020!5.47e-15!34;UBERON:0003528!5.47e-15!34;UBERON:0001871!2.89e-14!7;UBERON:0002780!8.94e-14!41;UBERON:0001890!8.94e-14!41;UBERON:0006240!8.94e-14!41;UBERON:0003080!2.26e-13!42;UBERON:0000073!4.27e-13!94;UBERON:0001016!4.27e-13!94;UBERON:0001017!5.68e-13!82;UBERON:0005743!3.86e-12!86;UBERON:0001049!7.19e-12!57;UBERON:0005068!7.19e-12!57;UBERON:0006241!7.19e-12!57;UBERON:0007135!7.19e-12!57;UBERON:0000955!1.19e-11!69;UBERON:0006238!1.19e-11!69;UBERON:0002616!2.43e-11!59;UBERON:0000349!7.28e-11!5;UBERON:0002346!4.06e-09!90;UBERON:0003056!3.09e-08!61;UBERON:0001876!9.75e-08!2;UBERON:0003075!1.28e-07!86;UBERON:0007284!1.28e-07!86;UBERON:0000924!9.56e-07!173;UBERON:0006601!9.56e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.42e-15;1!UBERON:0001825;5.42e-15;1!UBERON:0001871;2.07e-08;6!UBERON:0001876;7.52e-08;2!UBERON:0006955;7.52e-08;2!UBERON:0004801;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.42e-15,1;UBERON:0001825,5.42e-15,1;UBERON:0001871,1.85e-08,6;UBERON:0001876,6.58e-08,2;UBERON:0006955,8.04e-08,2;UBERON:0004801,8.04e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70740424036194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0.211125408127993,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4846354574708,0.236349546921671,0,0.0674035438541849,0,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.242998226632099,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5900587800262,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0.786329709279482,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0,0,0.756215088665154,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,5.4697480901822,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04265724207253,0,0,0,0,0,0,98.2816829297159,0,2.71070596893504,0.219881033490858,6.94429080406698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.872701380680755,0,0,0,0,0.126166424835079,0,0.760191006068622,0.407955318967927,0,0.918948995348449,0,0,0,0,0,0,0,0,0.31037357147929,0,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC100132354 | |||
}} |
Revision as of 12:03, 22 January 2014
Short description: | p1@LOC100132354 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100132354_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 1bp_to_NR_024478, uc011dvm.1_5end |
EntrezGene: | LOC100132354 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.02e-08 | 2 |
epithelial cell of cervix | 8.04e-08 | 2 |
epithelial cell of large intestine | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.42e-15 | 1 |
paranasal sinus | 5.42e-15 | 1 |
temporal lobe | 1.85e-08 | 6 |
amygdala | 6.58e-08 | 2 |
uterine epithelium | 8.04e-08 | 2 |
cervix epithelium | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.22e-15 | 14 |
paranasal sinus cancer | 5.42e-15 | 1 |
maxillary sinus cancer | 5.42e-15 | 1 |
lung small cell carcinoma | 2.26e-14 | 4 |
bronchus cancer | 1.32e-08 | 7 |
bronchogenic carcinoma | 1.32e-08 | 7 |
respiratory system cancer | 3.60e-08 | 16 |
signet ring cell adenocarcinoma | 5.37e-08 | 2 |
carcinoma | 2.87e-07 | 106 |
lung carcinoma | 7.00e-07 | 9 |
organ system cancer | 8.45e-07 | 137 |