FFCP PHASE1:Mm9::chr1:63223625..63223628,+: Difference between revisions
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{{FFCP|EntrezGene=55949|HGNC=|MCL_coexpression_id=60|UniProt=|association_with_transcript=-74bp_to_ENSMUST00000142062_5end|description=CAGE_peak_4_at_Eef1b2_5end|id=chr1:63223625..63223628,+|ontology_enrichment_celltype=CL:0000117!6.59e-15!23;CL:0000337!6.59e-15!23;CL:0000540!7.37e-10!33;CL:0000047!7.37e-10!33;CL:0000031!7.37e-10!33;CL:0000404!7.37e-10!33;CL:0000221!1.86e-08!44;CL:0000133!1.86e-08!44;CL:0002319!3.25e-08!43;CL:0000393!8.12e-08!39;CL:0000211!8.12e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-21,23;CL:0000337,1.67e-21,23;CL:0000540,1.35e-14,33;CL:0000047,1.35e-14,33;CL:0000031,1.35e-14,33;CL:0000404,1.35e-14,33;CL:0000393,3.81e-12,39;CL:0000211,3.81e-12,39;CL:0002611,2.70e-11,2;CL:0002319,6.86e-11,43;CL:0000221,1.30e-10,44;CL:0000133,1.30e-10,44;CL:0002613,3.09e-08,3;CL:0002612,7.46e-08,3;CL:0002321,1.70e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.76e-17!52;UBERON:0005068!8.76e-17!52;UBERON:0006241!8.76e-17!52;UBERON:0007135!8.76e-17!52;UBERON:0001017!4.46e-16!73;UBERON:0005743!4.46e-16!73;UBERON:0000073!7.94e-16!75;UBERON:0001016!7.94e-16!75;UBERON:0002346!4.78e-14!71;UBERON:0003075!4.78e-14!71;UBERON:0007284!4.78e-14!71;UBERON:0000955!1.00e-13!50;UBERON:0006238!1.00e-13!50;UBERON:0002616!4.84e-13!49;UBERON:0004121!9.94e-13!102;UBERON:0000924!9.94e-13!102;UBERON:0006601!9.94e-13!102;UBERON:0000033!2.03e-12!63;UBERON:0002020!4.33e-11!34;UBERON:0003080!1.01e-09!40;UBERON:0002780!3.46e-09!39;UBERON:0001890!3.46e-09!39;UBERON:0006240!3.46e-09!39;UBERON:0003076!6.83e-09!12;UBERON:0003057!6.83e-09!12;UBERON:0003056!1.00e-08!49;UBERON:0002791!1.84e-07!29;UBERON:0003528!1.84e-07!29;UBERON:0001893!1.84e-07!29;UBERON:0007811!2.55e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001948,7.89e-17,5;UBERON:0002315,7.89e-17,5;UBERON:0003076,4.36e-15,12;UBERON:0003057,4.36e-15,12;UBERON:0002240,4.54e-14,6;UBERON:0005174,4.54e-14,6;UBERON:0001137,4.54e-14,6;UBERON:0000073,3.59e-12,54;UBERON:0002020,2.56e-11,34;UBERON:0002256,2.70e-11,2;UBERON:0002420,7.32e-11,8;UBERON:0007245,7.32e-11,8;UBERON:0010009,7.32e-11,8;UBERON:0010011,7.32e-11,8;UBERON:0000454,7.32e-11,8;UBERON:0001049,1.39e-10,52;UBERON:0005068,1.39e-10,52;UBERON:0006241,1.39e-10,52;UBERON:0007135,1.39e-10,52;UBERON:0001017,3.19e-10,73;UBERON:0000369,4.68e-10,5;UBERON:0002435,4.68e-10,5;UBERON:0000204,4.68e-10,5;UBERON:0010082,4.68e-10,5;UBERON:0001016,6.72e-10,75;UBERON:0002346,2.63e-08,64;UBERON:0003075,2.63e-08,64;UBERON:0007284,2.63e-08,64;UBERON:0002257,7.46e-08,3;UBERON:0004121,2.07e-07,95;UBERON:0000924,2.07e-07,95;UBERON:0006601,2.07e-07,95;UBERON:0010371,4.36e-07,73|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.935476191661768,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,1.21505344498522,0.841299845405528,1.71390590642282,1.10434270475807,0.734944795289724,0.479227355091182,0,0,1.27687338085188,0.46081959976873,0.923204014111357,1.64677758484337,3.64639359389732,2.23346399201105,0,0.763991238884051,1.47314292736834,0.854230084794618,1.3047961207771,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,1.01104889002957,0,0,0,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,1.00523481690292,0.347648640384553,0.767146371990992,0.62336413367868,0.486723789203273,0,0,0.252722758433675,0,0,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0.321101179975584,1.17211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0,0,4.50954350947352,0.299033092087958,0,0,0.258319646955462,0.337912250981556,0,0,0.104859344425711,2.65742532908607,3.45636007509439,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.515559547031063,0,0,0,0.45032120322422,0,0.51776031175182,0,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.394017929502254,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0|short_description=p4@Eef1b2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:55949 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-74bp_to_ENSMUST00000142062_5end | |||
|cluster_id=chr1:63223625..63223628,+ | |||
|description=CAGE_peak_4_at_Eef1b2_5end | |||
|id=chr1:63223625..63223628,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.59e-15!23;CL:0000337!6.59e-15!23;CL:0000540!7.37e-10!33;CL:0000047!7.37e-10!33;CL:0000031!7.37e-10!33;CL:0000404!7.37e-10!33;CL:0000221!1.86e-08!44;CL:0000133!1.86e-08!44;CL:0002319!3.25e-08!43;CL:0000393!8.12e-08!39;CL:0000211!8.12e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-21,23;CL:0000337,1.67e-21,23;CL:0000540,1.35e-14,33;CL:0000047,1.35e-14,33;CL:0000031,1.35e-14,33;CL:0000404,1.35e-14,33;CL:0000393,3.81e-12,39;CL:0000211,3.81e-12,39;CL:0002611,2.70e-11,2;CL:0002319,6.86e-11,43;CL:0000221,1.30e-10,44;CL:0000133,1.30e-10,44;CL:0002613,3.09e-08,3;CL:0002612,7.46e-08,3;CL:0002321,1.70e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.76e-17!52;UBERON:0005068!8.76e-17!52;UBERON:0006241!8.76e-17!52;UBERON:0007135!8.76e-17!52;UBERON:0001017!4.46e-16!73;UBERON:0005743!4.46e-16!73;UBERON:0000073!7.94e-16!75;UBERON:0001016!7.94e-16!75;UBERON:0002346!4.78e-14!71;UBERON:0003075!4.78e-14!71;UBERON:0007284!4.78e-14!71;UBERON:0000955!1.00e-13!50;UBERON:0006238!1.00e-13!50;UBERON:0002616!4.84e-13!49;UBERON:0004121!9.94e-13!102;UBERON:0000924!9.94e-13!102;UBERON:0006601!9.94e-13!102;UBERON:0000033!2.03e-12!63;UBERON:0002020!4.33e-11!34;UBERON:0003080!1.01e-09!40;UBERON:0002780!3.46e-09!39;UBERON:0001890!3.46e-09!39;UBERON:0006240!3.46e-09!39;UBERON:0003076!6.83e-09!12;UBERON:0003057!6.83e-09!12;UBERON:0003056!1.00e-08!49;UBERON:0002791!1.84e-07!29;UBERON:0003528!1.84e-07!29;UBERON:0001893!1.84e-07!29;UBERON:0007811!2.55e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,7.89e-17,5;UBERON:0002315,7.89e-17,5;UBERON:0003076,4.36e-15,12;UBERON:0003057,4.36e-15,12;UBERON:0002240,4.54e-14,6;UBERON:0005174,4.54e-14,6;UBERON:0001137,4.54e-14,6;UBERON:0000073,3.59e-12,54;UBERON:0002020,2.56e-11,34;UBERON:0002256,2.70e-11,2;UBERON:0002420,7.32e-11,8;UBERON:0007245,7.32e-11,8;UBERON:0010009,7.32e-11,8;UBERON:0010011,7.32e-11,8;UBERON:0000454,7.32e-11,8;UBERON:0001049,1.39e-10,52;UBERON:0005068,1.39e-10,52;UBERON:0006241,1.39e-10,52;UBERON:0007135,1.39e-10,52;UBERON:0001017,3.19e-10,73;UBERON:0000369,4.68e-10,5;UBERON:0002435,4.68e-10,5;UBERON:0000204,4.68e-10,5;UBERON:0010082,4.68e-10,5;UBERON:0001016,6.72e-10,75;UBERON:0002346,2.63e-08,64;UBERON:0003075,2.63e-08,64;UBERON:0007284,2.63e-08,64;UBERON:0002257,7.46e-08,3;UBERON:0004121,2.07e-07,95;UBERON:0000924,2.07e-07,95;UBERON:0006601,2.07e-07,95;UBERON:0010371,4.36e-07,73 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.935476191661768,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,1.21505344498522,0.841299845405528,1.71390590642282,1.10434270475807,0.734944795289724,0.479227355091182,0,0,1.27687338085188,0.46081959976873,0.923204014111357,1.64677758484337,3.64639359389732,2.23346399201105,0,0.763991238884051,1.47314292736834,0.854230084794618,1.3047961207771,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,1.01104889002957,0,0,0,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,1.00523481690292,0.347648640384553,0.767146371990992,0.62336413367868,0.486723789203273,0,0,0.252722758433675,0,0,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0.321101179975584,1.17211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0,0,4.50954350947352,0.299033092087958,0,0,0.258319646955462,0.337912250981556,0,0,0.104859344425711,2.65742532908607,3.45636007509439,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.515559547031063,0,0,0,0.45032120322422,0,0.51776031175182,0,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.394017929502254,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0 | |||
|short_description=p4@Eef1b2 | |||
}} |
Revision as of 20:42, 5 August 2015
Short description: | p4@Eef1b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Eef1b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -74bp_to_ENSMUST00000142062_5end |
EntrezGene: | 55949 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.67e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-21 | 23 |
neuron | 1.35e-14 | 33 |
neuronal stem cell | 1.35e-14 | 33 |
neuroblast | 1.35e-14 | 33 |
electrically signaling cell | 1.35e-14 | 33 |
electrically responsive cell | 3.81e-12 | 39 |
electrically active cell | 3.81e-12 | 39 |
neuron of the dorsal spinal cord | 2.70e-11 | 2 |
neural cell | 6.86e-11 | 43 |
ectodermal cell | 1.30e-10 | 44 |
neurectodermal cell | 1.30e-10 | 44 |
striatum neuron | 3.09e-08 | 3 |
neuron of the ventral spinal cord | 7.46e-08 | 3 |
embryonic cell | 1.70e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 7.89e-17 | 5 |
gray matter of spinal cord | 7.89e-17 | 5 |
posterior neural tube | 4.36e-15 | 12 |
chordal neural plate | 4.36e-15 | 12 |
spinal cord | 4.54e-14 | 6 |
dorsal region element | 4.54e-14 | 6 |
dorsum | 4.54e-14 | 6 |
regional part of nervous system | 3.59e-12 | 54 |
gray matter | 2.56e-11 | 34 |
dorsal horn of spinal cord | 2.70e-11 | 2 |
basal ganglion | 7.32e-11 | 8 |
nuclear complex of neuraxis | 7.32e-11 | 8 |
aggregate regional part of brain | 7.32e-11 | 8 |
collection of basal ganglia | 7.32e-11 | 8 |
cerebral subcortex | 7.32e-11 | 8 |
neural tube | 1.39e-10 | 52 |
neural rod | 1.39e-10 | 52 |
future spinal cord | 1.39e-10 | 52 |
neural keel | 1.39e-10 | 52 |
central nervous system | 3.19e-10 | 73 |
corpus striatum | 4.68e-10 | 5 |
striatum | 4.68e-10 | 5 |
ventral part of telencephalon | 4.68e-10 | 5 |
future corpus striatum | 4.68e-10 | 5 |
nervous system | 6.72e-10 | 75 |
neurectoderm | 2.63e-08 | 64 |
neural plate | 2.63e-08 | 64 |
presumptive neural plate | 2.63e-08 | 64 |
ventral horn of spinal cord | 7.46e-08 | 3 |
ectoderm-derived structure | 2.07e-07 | 95 |
ectoderm | 2.07e-07 | 95 |
presumptive ectoderm | 2.07e-07 | 95 |
ecto-epithelium | 4.36e-07 | 73 |