FFCP PHASE1:Mm9::chr1:137715387..137715411,+: Difference between revisions
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{{FFCP|EntrezGene=16763|HGNC=|MCL_coexpression_id=109|UniProt=P57016|association_with_transcript=212bp_to_ENSMUST00000038760,NM_133664,uc007ctt.1_5end|description=CAGE_peak_3_at_Lad1_5end|id=chr1:137715387..137715411,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002076,1.32e-07,15;CL:0000239,1.80e-07,6;CL:0000677,1.80e-07,6;CL:0000584,1.80e-07,6;CL:0002563,2.71e-07,9;CL:0002251,2.71e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.42e-08!59;UBERON:0000344!2.71e-08!15;UBERON:0001242!1.93e-07!13;UBERON:0000060!1.93e-07!13;UBERON:0001262!1.93e-07!13;UBERON:0004786!1.93e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.22e-18,47;UBERON:0000160,3.08e-16,31;UBERON:0000344,5.63e-10,15;UBERON:0004119,6.64e-09,118;UBERON:0000925,6.64e-09,118;UBERON:0006595,6.64e-09,118;UBERON:0001242,1.13e-08,13;UBERON:0001262,1.13e-08,13;UBERON:0004786,1.13e-08,13;UBERON:0001007,3.31e-08,116;UBERON:0001555,3.31e-08,116;UBERON:0007026,3.31e-08,116;UBERON:0004921,2.10e-07,114;UBERON:0003350,2.71e-07,9;UBERON:0004808,2.71e-07,9;UBERON:0001277,2.71e-07,9;UBERON:0000014,5.24e-07,5;UBERON:0001003,5.24e-07,5;UBERON:0002097,5.24e-07,5;UBERON:0002199,5.24e-07,5;UBERON:0007029,5.24e-07,5;UBERON:0007376,5.24e-07,5;UBERON:0002416,5.24e-07,5;UBERON:0007383,5.24e-07,5|phase1_expression=0,10.1202868215415,6.82498859084304,7.56160528267075,6.01074875935617,3.52546471014969,4.90586545250604,1.93684985162364,0.703943610758334,1.87251621057595,11.1291679346578,16.0342039580626,0.171200729931206,0,0,0.404950534779652,0,0,0.137114433605739,0,0.595303031057488,0,0,2.55987876469451,1.83527424853736,10.3361753540704,4.30761996159075,4.30942465371778,3.04037471130198,3.52842181663903,3.32595765982957,0,0,0,0.288851619751275,1.49611180822643,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,9.09262372247099,5.32055717497707,10.6160133453104,1.37020655662872,0.258937883647172,0,0,0,0.230615497256059,0,0.23517741427141,0,0.988779870937496,0,0,0,0,0,3.72783522436244,0,0,2.29911349687732,0.239630249011841,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0.20778804455956,0,0.203678727700633,0.373220911830279,1.0108910337347,1.05220927943237,0,0.229902104433473,0.720248519221397,0.30140963567143,0.680364991513279,0.768682321709099,0.187403449119458,1.03481348295606,0.431135985865684,0.378212160335639,0.879755620819744,0.657587197282725,1.94633074457919,5.92028683087683,4.11564272815887,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0.210289948564127,0,0.991256348951394,0.793351699990633,0,0,1.15980715189884,2.01683524623343,2.44615848229357,1.33157938278791,4.2707615539006,2.14108641141214,2.01068167040216,1.79060824837036,2.72949721966768,4.49409704327111,2.80979464837102,3.78368419183298,1.70701110857774,0.456994050438915,2.25415471346161,0.610953983535943,0.581857461502877,1.26244475802573,2.08680572510049,2.95220295959204,4.08196692387575,3.94870924549762,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0.585400943573396,0.157635144106191,0,0,0.983179888294428,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,1.40803024838226,1.48282449604674,0.220528398054962,9.8931751764888,8.7190790415789,6.33285711745637,10.9822556482886,11.3257220824092,1.1659233465194,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.679913719975421,0.139951452323658,0.414599921413271,1.90934123603023,0,1.01659733563424,4.10420295122845,7.52717865652087,5.45906409365444,5.52943820177765,3.88471241909079,3.40282724579238,3.11075935900303,4.97071450469541,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0.632022241256357,0.202725215290164,0.616265742988964,0.649604114888975,0.537080087002444,0.39736270956253,0.721172697119813,1.32920574457119,0.807731599585181,0.304827226619999,0.604957110821043,0.779663045918019,1.05833025804362,0.467507608726276,23.3532295123668,0.665957860122194,0.179427713218951,2.18250001273302,0.579568782096571,1.12609485270709,2.19781949120718,61.3093564166128,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0.51776031175182,0.31136204275253,0,0,0.972426868273176,0.419226325255965,1.10306105070008,0.666740183404846,0.824140228955577,0.64183841918363,2.27427490587418,0.50695859978048,1.69763707247469,1.40462261204824,0.704276676453562,0.976402972245426,0.952587382566147,1.39061191133827,1.73618298417335,0,1.47198920134397,0.342869252385415,1.24233064311536,1.1921809497366,0.436039249896986,0.658765662907314,1.60767754994185,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,1.30498519936592,0.985044823755635,2.45538625901814,1.54936841185966,2.70069255373598,1.49886346762768,1.63752125911786,1.71896843238639,0.956441660344217,1.76473135295612,0.231867835620421|short_description=p3@Lad1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16763 | |||
|HGNC= | |||
|MCL_coexpression_id=109 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P57016 | |||
|association_with_transcript=212bp_to_ENSMUST00000038760,NM_133664,uc007ctt.1_5end | |||
|cluster_id=chr1:137715387..137715411,+ | |||
|description=CAGE_peak_3_at_Lad1_5end | |||
|id=chr1:137715387..137715411,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.32e-07,15;CL:0000239,1.80e-07,6;CL:0000677,1.80e-07,6;CL:0000584,1.80e-07,6;CL:0002563,2.71e-07,9;CL:0002251,2.71e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.42e-08!59;UBERON:0000344!2.71e-08!15;UBERON:0001242!1.93e-07!13;UBERON:0000060!1.93e-07!13;UBERON:0001262!1.93e-07!13;UBERON:0004786!1.93e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.22e-18,47;UBERON:0000160,3.08e-16,31;UBERON:0000344,5.63e-10,15;UBERON:0004119,6.64e-09,118;UBERON:0000925,6.64e-09,118;UBERON:0006595,6.64e-09,118;UBERON:0001242,1.13e-08,13;UBERON:0001262,1.13e-08,13;UBERON:0004786,1.13e-08,13;UBERON:0001007,3.31e-08,116;UBERON:0001555,3.31e-08,116;UBERON:0007026,3.31e-08,116;UBERON:0004921,2.10e-07,114;UBERON:0003350,2.71e-07,9;UBERON:0004808,2.71e-07,9;UBERON:0001277,2.71e-07,9;UBERON:0000014,5.24e-07,5;UBERON:0001003,5.24e-07,5;UBERON:0002097,5.24e-07,5;UBERON:0002199,5.24e-07,5;UBERON:0007029,5.24e-07,5;UBERON:0007376,5.24e-07,5;UBERON:0002416,5.24e-07,5;UBERON:0007383,5.24e-07,5 | |||
|phase1_expression=0,10.1202868215415,6.82498859084304,7.56160528267075,6.01074875935617,3.52546471014969,4.90586545250604,1.93684985162364,0.703943610758334,1.87251621057595,11.1291679346578,16.0342039580626,0.171200729931206,0,0,0.404950534779652,0,0,0.137114433605739,0,0.595303031057488,0,0,2.55987876469451,1.83527424853736,10.3361753540704,4.30761996159075,4.30942465371778,3.04037471130198,3.52842181663903,3.32595765982957,0,0,0,0.288851619751275,1.49611180822643,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,9.09262372247099,5.32055717497707,10.6160133453104,1.37020655662872,0.258937883647172,0,0,0,0.230615497256059,0,0.23517741427141,0,0.988779870937496,0,0,0,0,0,3.72783522436244,0,0,2.29911349687732,0.239630249011841,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0.20778804455956,0,0.203678727700633,0.373220911830279,1.0108910337347,1.05220927943237,0,0.229902104433473,0.720248519221397,0.30140963567143,0.680364991513279,0.768682321709099,0.187403449119458,1.03481348295606,0.431135985865684,0.378212160335639,0.879755620819744,0.657587197282725,1.94633074457919,5.92028683087683,4.11564272815887,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0.210289948564127,0,0.991256348951394,0.793351699990633,0,0,1.15980715189884,2.01683524623343,2.44615848229357,1.33157938278791,4.2707615539006,2.14108641141214,2.01068167040216,1.79060824837036,2.72949721966768,4.49409704327111,2.80979464837102,3.78368419183298,1.70701110857774,0.456994050438915,2.25415471346161,0.610953983535943,0.581857461502877,1.26244475802573,2.08680572510049,2.95220295959204,4.08196692387575,3.94870924549762,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0.585400943573396,0.157635144106191,0,0,0.983179888294428,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,1.40803024838226,1.48282449604674,0.220528398054962,9.8931751764888,8.7190790415789,6.33285711745637,10.9822556482886,11.3257220824092,1.1659233465194,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.679913719975421,0.139951452323658,0.414599921413271,1.90934123603023,0,1.01659733563424,4.10420295122845,7.52717865652087,5.45906409365444,5.52943820177765,3.88471241909079,3.40282724579238,3.11075935900303,4.97071450469541,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0.632022241256357,0.202725215290164,0.616265742988964,0.649604114888975,0.537080087002444,0.39736270956253,0.721172697119813,1.32920574457119,0.807731599585181,0.304827226619999,0.604957110821043,0.779663045918019,1.05833025804362,0.467507608726276,23.3532295123668,0.665957860122194,0.179427713218951,2.18250001273302,0.579568782096571,1.12609485270709,2.19781949120718,61.3093564166128,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0.51776031175182,0.31136204275253,0,0,0.972426868273176,0.419226325255965,1.10306105070008,0.666740183404846,0.824140228955577,0.64183841918363,2.27427490587418,0.50695859978048,1.69763707247469,1.40462261204824,0.704276676453562,0.976402972245426,0.952587382566147,1.39061191133827,1.73618298417335,0,1.47198920134397,0.342869252385415,1.24233064311536,1.1921809497366,0.436039249896986,0.658765662907314,1.60767754994185,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,1.30498519936592,0.985044823755635,2.45538625901814,1.54936841185966,2.70069255373598,1.49886346762768,1.63752125911786,1.71896843238639,0.956441660344217,1.76473135295612,0.231867835620421 | |||
|short_description=p3@Lad1 | |||
}} |
Revision as of 21:08, 4 August 2015
Short description: | p3@Lad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:109 |
Association with transcript: | 212bp_to_ENSMUST00000038760, NM_133664, uc007ctt.1_5end |
EntrezGene: | 16763 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.32e-07 | 15 |
brush border epithelial cell | 1.80e-07 | 6 |
gut absorptive cell | 1.80e-07 | 6 |
enterocyte | 1.80e-07 | 6 |
intestinal epithelial cell | 2.71e-07 | 9 |
epithelial cell of alimentary canal | 2.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.22e-18 | 47 |
intestine | 3.08e-16 | 31 |
mucosa | 5.63e-10 | 15 |
endoderm-derived structure | 6.64e-09 | 118 |
endoderm | 6.64e-09 | 118 |
presumptive endoderm | 6.64e-09 | 118 |
intestinal mucosa | 1.13e-08 | 13 |
wall of intestine | 1.13e-08 | 13 |
gastrointestinal system mucosa | 1.13e-08 | 13 |
digestive system | 3.31e-08 | 116 |
digestive tract | 3.31e-08 | 116 |
primitive gut | 3.31e-08 | 116 |
subdivision of digestive tract | 2.10e-07 | 114 |
epithelium of mucosa | 2.71e-07 | 9 |
gastrointestinal system epithelium | 2.71e-07 | 9 |
intestinal epithelium | 2.71e-07 | 9 |
zone of skin | 5.24e-07 | 5 |
skin epidermis | 5.24e-07 | 5 |
skin of body | 5.24e-07 | 5 |
integument | 5.24e-07 | 5 |
surface | 5.24e-07 | 5 |
outer epithelium | 5.24e-07 | 5 |
integumental system | 5.24e-07 | 5 |
enveloping layer of ectoderm | 5.24e-07 | 5 |