FFCP PHASE1:Hg19::chr6:111136318..111136352,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19338 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000468997_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_CDK19_5end | |||
|id=chr6:111136318..111136352,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;6.44e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.31e-08,5;CL:0001029,4.31e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.54e-16;82!UBERON:0006241;3.15e-07;3!UBERON:0003057;3.15e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.28e-31!82;UBERON:0001049!8.83e-30!57;UBERON:0005068!8.83e-30!57;UBERON:0006241!8.83e-30!57;UBERON:0007135!8.83e-30!57;UBERON:0000073!1.05e-29!94;UBERON:0001016!1.05e-29!94;UBERON:0005743!1.37e-29!86;UBERON:0000955!3.46e-26!69;UBERON:0006238!3.46e-26!69;UBERON:0002780!8.54e-26!41;UBERON:0001890!8.54e-26!41;UBERON:0006240!8.54e-26!41;UBERON:0003080!1.24e-24!42;UBERON:0002616!1.11e-23!59;UBERON:0001893!3.05e-22!34;UBERON:0002020!3.90e-22!34;UBERON:0003528!3.90e-22!34;UBERON:0002791!1.71e-21!33;UBERON:0001869!1.15e-20!32;UBERON:0002346!2.10e-19!90;UBERON:0003075!9.73e-19!86;UBERON:0007284!9.73e-19!86;UBERON:0007023!1.24e-17!115;UBERON:0000956!1.51e-15!25;UBERON:0000203!1.51e-15!25;UBERON:0002619!3.02e-15!22;UBERON:0003056!5.16e-15!61;UBERON:0000924!6.91e-15!173;UBERON:0006601!6.91e-15!173;UBERON:0004121!3.17e-14!169;UBERON:0001950!7.62e-14!20;UBERON:0000033!7.10e-13!123;UBERON:0000153!1.39e-12!129;UBERON:0007811!1.39e-12!129;UBERON:0002308!3.86e-08!9;UBERON:0000125!3.86e-08!9;UBERON:0002420!4.47e-08!9;UBERON:0007245!4.47e-08!9;UBERON:0010009!4.47e-08!9;UBERON:0010011!4.47e-08!9;UBERON:0000454!4.47e-08!9;UBERON:0000062!5.80e-07!511;UBERON:0009663!9.93e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.44e-46;34!UBERON:0003528;3.38e-45;34!UBERON:0002020;3.38e-45;34!UBERON:0002791;1.88e-44;32!UBERON:0001869;2.51e-44;32!UBERON:0002619;2.57e-41;22!UBERON:0002780;6.87e-41;41!UBERON:0001890;6.87e-41;41!UBERON:0001950;2.19e-37;20!UBERON:0000073;2.19e-36;53!UBERON:0002616;2.19e-36;53!UBERON:0000956;9.77e-36;25!UBERON:0000203;9.77e-36;25!UBERON:0001017;3.83e-26;75!UBERON:0000955;3.85e-24;68!UBERON:0001016;5.39e-23;83!UBERON:0000125;6.99e-20;9!UBERON:0002308;6.99e-20;9!UBERON:0002420;1.03e-19;9!UBERON:0007245;1.03e-19;9!UBERON:0010009;1.03e-19;9!UBERON:0010011;1.03e-19;9!UBERON:0000454;1.03e-19;9!UBERON:0009663;5.48e-16;7!UBERON:0002298;1.34e-13;6!UBERON:0000200;3.78e-13;6!UBERON:0000349;2.13e-11;5!UBERON:0001872;3.99e-11;5!UBERON:0001871;5.20e-11;6!UBERON:0002021;7.95e-11;5!UBERON:0007023;9.00e-11;114!UBERON:0004732;5.95e-10;13!UBERON:0000369;1.42e-09;4!UBERON:0002435;1.42e-09;4!UBERON:0000204;1.42e-09;4!UBERON:0011216;2.45e-08;132!UBERON:0004733;3.04e-08;12!UBERON:0002028;3.04e-08;12!UBERON:0000988;1.10e-07;3!UBERON:0001896;1.41e-07;3!UBERON:0005290;1.41e-07;3!UBERON:0001870;1.75e-07;3!UBERON:0005383;1.87e-07;3!UBERON:0005382;1.87e-07;3!UBERON:0002240;3.15e-07;3!UBERON:0005174;3.15e-07;3!UBERON:0001137;3.15e-07;3 | |||
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| |||
|short_description=p5@CDK19 | |||
}} |
Revision as of 13:22, 22 January 2014
Short description: | p5@CDK19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDK19_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000468997_5end |
EntrezGene: | CDK19 |
HGNC: | 19338 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.31e-08 | 5 |
common dendritic progenitor | 4.31e-08 | 5 |