FFCP PHASE1:Mm9::chr19:11092516..11092530,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=76002|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=-63bp_to_NM_001251849,uc008grm.1_5end|description=CAGE_peak_2_at_Ms4a18_5end|id=chr19:11092516..11092530,-|ontology_enrichment_celltype=CL:0002563!1.99e-13!9;CL:0002251!1.99e-13!9;CL:0000239!3.16e-10!6;CL:0000677!3.16e-10!6;CL:0000212!3.16e-10!6;CL:0000584!3.16e-10!6;CL:0000075!1.36e-08!7;CL:0002076!3.71e-07!15;CL:0000066!7.23e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,1.44e-17,9;CL:0002251,1.44e-17,9;CL:0000239,2.98e-16,6;CL:0000677,2.98e-16,6;CL:0000584,2.98e-16,6;CL:0000075,8.01e-14,7;CL:0000066,7.63e-11,25;CL:0002076,5.45e-10,15;CL:0000682,2.96e-09,3;CL:0000223,3.73e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.83e-24!43;UBERON:0000344!5.70e-22!15;UBERON:0001242!4.55e-19!13;UBERON:0000060!4.55e-19!13;UBERON:0001262!4.55e-19!13;UBERON:0004786!4.55e-19!13;UBERON:0005409!5.61e-19!59;UBERON:0003350!1.99e-13!9;UBERON:0004808!1.99e-13!9;UBERON:0001277!1.99e-13!9;UBERON:0004923!5.45e-12!24;UBERON:0000485!1.45e-10!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.96e-55,31;UBERON:0005409,3.10e-34,47;UBERON:0000344,6.39e-32,15;UBERON:0001242,4.95e-27,13;UBERON:0001262,4.95e-27,13;UBERON:0004786,4.95e-27,13;UBERON:0004923,9.86e-19,24;UBERON:0003350,1.44e-17,9;UBERON:0004808,1.44e-17,9;UBERON:0001277,1.44e-17,9;UBERON:0000485,4.01e-14,11;UBERON:0001007,1.22e-12,116;UBERON:0001555,1.22e-12,116;UBERON:0007026,1.22e-12,116;UBERON:0004119,2.56e-12,118;UBERON:0000925,2.56e-12,118;UBERON:0006595,2.56e-12,118;UBERON:0002108,2.43e-11,4;UBERON:0004921,1.32e-10,114;UBERON:0000331,5.78e-09,3;UBERON:0002116,5.78e-09,3;UBERON:0001204,5.78e-09,3;UBERON:0001168,5.78e-09,3|phase1_expression=0,40.1321718785265,28.6649520815408,13.9133537201142,15.5277676283368,9.73699777088961,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1592347021341,10.5528269290898,33.8796858827862,13.3536218809313,23.4863643627619,28.3134894989997,18.3981994724749,8.64748991555688,0,0,0,0.577703239502549,1.32987716286794,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4955674843866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,7.66906643324278,0,0,4.63922860759536,4.84040459096022,3.33567065767305,3.42406127002606,10.9141684155238,5.27036655116835,4.02136334080431,3.18330355265841,5.26403035221624,12.5834717211591,11.2391785934841,7.76650965692032,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0.134864346384821,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45864030240976,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0.644613162144895,0.191288332068843,0,0|short_description=p2@Ms4a18}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76002 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-63bp_to_NM_001251849,uc008grm.1_5end | |||
|cluster_id=chr19:11092516..11092530,- | |||
|description=CAGE_peak_2_at_Ms4a18_5end | |||
|id=chr19:11092516..11092530,- | |||
|ontology_enrichment_celltype=CL:0002563!1.99e-13!9;CL:0002251!1.99e-13!9;CL:0000239!3.16e-10!6;CL:0000677!3.16e-10!6;CL:0000212!3.16e-10!6;CL:0000584!3.16e-10!6;CL:0000075!1.36e-08!7;CL:0002076!3.71e-07!15;CL:0000066!7.23e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.44e-17,9;CL:0002251,1.44e-17,9;CL:0000239,2.98e-16,6;CL:0000677,2.98e-16,6;CL:0000584,2.98e-16,6;CL:0000075,8.01e-14,7;CL:0000066,7.63e-11,25;CL:0002076,5.45e-10,15;CL:0000682,2.96e-09,3;CL:0000223,3.73e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.83e-24!43;UBERON:0000344!5.70e-22!15;UBERON:0001242!4.55e-19!13;UBERON:0000060!4.55e-19!13;UBERON:0001262!4.55e-19!13;UBERON:0004786!4.55e-19!13;UBERON:0005409!5.61e-19!59;UBERON:0003350!1.99e-13!9;UBERON:0004808!1.99e-13!9;UBERON:0001277!1.99e-13!9;UBERON:0004923!5.45e-12!24;UBERON:0000485!1.45e-10!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.96e-55,31;UBERON:0005409,3.10e-34,47;UBERON:0000344,6.39e-32,15;UBERON:0001242,4.95e-27,13;UBERON:0001262,4.95e-27,13;UBERON:0004786,4.95e-27,13;UBERON:0004923,9.86e-19,24;UBERON:0003350,1.44e-17,9;UBERON:0004808,1.44e-17,9;UBERON:0001277,1.44e-17,9;UBERON:0000485,4.01e-14,11;UBERON:0001007,1.22e-12,116;UBERON:0001555,1.22e-12,116;UBERON:0007026,1.22e-12,116;UBERON:0004119,2.56e-12,118;UBERON:0000925,2.56e-12,118;UBERON:0006595,2.56e-12,118;UBERON:0002108,2.43e-11,4;UBERON:0004921,1.32e-10,114;UBERON:0000331,5.78e-09,3;UBERON:0002116,5.78e-09,3;UBERON:0001204,5.78e-09,3;UBERON:0001168,5.78e-09,3 | |||
|phase1_expression=0,40.1321718785265,28.6649520815408,13.9133537201142,15.5277676283368,9.73699777088961,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1592347021341,10.5528269290898,33.8796858827862,13.3536218809313,23.4863643627619,28.3134894989997,18.3981994724749,8.64748991555688,0,0,0,0.577703239502549,1.32987716286794,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4955674843866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,7.66906643324278,0,0,4.63922860759536,4.84040459096022,3.33567065767305,3.42406127002606,10.9141684155238,5.27036655116835,4.02136334080431,3.18330355265841,5.26403035221624,12.5834717211591,11.2391785934841,7.76650965692032,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0.134864346384821,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45864030240976,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p2@Ms4a18 | |||
}} |
Revision as of 07:06, 6 August 2015
Short description: | p2@Ms4a18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ms4a18_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -63bp_to_NM_001251849, uc008grm.1_5end |
EntrezGene: | 76002 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.44e-17 | 9 |
epithelial cell of alimentary canal | 1.44e-17 | 9 |
brush border epithelial cell | 2.98e-16 | 6 |
gut absorptive cell | 2.98e-16 | 6 |
enterocyte | 2.98e-16 | 6 |
columnar/cuboidal epithelial cell | 8.01e-14 | 7 |
epithelial cell | 7.63e-11 | 25 |
endo-epithelial cell | 5.45e-10 | 15 |
M cell of gut | 2.96e-09 | 3 |
endodermal cell | 3.73e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.96e-55 | 31 |
gastrointestinal system | 3.10e-34 | 47 |
mucosa | 6.39e-32 | 15 |
intestinal mucosa | 4.95e-27 | 13 |
wall of intestine | 4.95e-27 | 13 |
gastrointestinal system mucosa | 4.95e-27 | 13 |
organ component layer | 9.86e-19 | 24 |
epithelium of mucosa | 1.44e-17 | 9 |
gastrointestinal system epithelium | 1.44e-17 | 9 |
intestinal epithelium | 1.44e-17 | 9 |
simple columnar epithelium | 4.01e-14 | 11 |
digestive system | 1.22e-12 | 116 |
digestive tract | 1.22e-12 | 116 |
primitive gut | 1.22e-12 | 116 |
endoderm-derived structure | 2.56e-12 | 118 |
endoderm | 2.56e-12 | 118 |
presumptive endoderm | 2.56e-12 | 118 |
small intestine | 2.43e-11 | 4 |
subdivision of digestive tract | 1.32e-10 | 114 |
ileal mucosa | 5.78e-09 | 3 |
ileum | 5.78e-09 | 3 |
mucosa of small intestine | 5.78e-09 | 3 |
wall of small intestine | 5.78e-09 | 3 |