FFCP PHASE1:Mm9::chr18:37133453..37133470,+: Difference between revisions
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{{FFCP|EntrezGene=12939|HGNC=|MCL_coexpression_id=13|UniProt=Q91Y13|association_with_transcript=-107bp_to_NM_009957,uc008epc.2_5end|description=CAGE_peak_1_at_Pcdha7_5end|id=chr18:37133453..37133470,+|ontology_enrichment_celltype=CL:0000117!5.47e-17!23;CL:0000337!5.47e-17!23;CL:0000540!6.79e-17!33;CL:0000047!6.79e-17!33;CL:0000031!6.79e-17!33;CL:0000404!6.79e-17!33;CL:0000393!2.47e-12!39;CL:0000211!2.47e-12!39;CL:0000221!2.62e-12!44;CL:0000133!2.62e-12!44;CL:0002319!4.92e-12!43;CL:0000055!1.21e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-24,23;CL:0000337,1.88e-24,23;CL:0000540,2.50e-19,33;CL:0000047,2.50e-19,33;CL:0000031,2.50e-19,33;CL:0000404,2.50e-19,33;CL:0000393,3.58e-15,39;CL:0000211,3.58e-15,39;CL:0002319,4.58e-13,43;CL:0000221,1.33e-12,44;CL:0000133,1.33e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.99e-31!71;UBERON:0003075!1.99e-31!71;UBERON:0007284!1.99e-31!71;UBERON:0004121!7.41e-31!102;UBERON:0000924!7.41e-31!102;UBERON:0006601!7.41e-31!102;UBERON:0000073!5.94e-30!75;UBERON:0001016!5.94e-30!75;UBERON:0001017!7.81e-30!73;UBERON:0005743!7.81e-30!73;UBERON:0000033!1.03e-26!63;UBERON:0001049!1.84e-25!52;UBERON:0005068!1.84e-25!52;UBERON:0006241!1.84e-25!52;UBERON:0007135!1.84e-25!52;UBERON:0003056!4.88e-24!49;UBERON:0000955!1.22e-23!50;UBERON:0006238!1.22e-23!50;UBERON:0002616!9.09e-23!49;UBERON:0002020!3.16e-22!34;UBERON:0003080!6.87e-20!40;UBERON:0002780!2.83e-19!39;UBERON:0001890!2.83e-19!39;UBERON:0006240!2.83e-19!39;UBERON:0002791!3.53e-18!29;UBERON:0003528!3.53e-18!29;UBERON:0001893!3.53e-18!29;UBERON:0007811!1.21e-13!86;UBERON:0000956!2.46e-12!21;UBERON:0001869!2.46e-12!21;UBERON:0000203!2.46e-12!21;UBERON:0000153!2.88e-11!94;UBERON:0002619!5.21e-10!17;UBERON:0002021!2.56e-09!10;UBERON:0000411!2.56e-09!10;UBERON:0001950!2.56e-09!10;UBERON:0002420!3.90e-07!8;UBERON:0007245!3.90e-07!8;UBERON:0010009!3.90e-07!8;UBERON:0010011!3.90e-07!8;UBERON:0000454!3.90e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.33e-36,64;UBERON:0003075,1.33e-36,64;UBERON:0007284,1.33e-36,64;UBERON:0000073,4.05e-36,54;UBERON:0001017,4.69e-36,73;UBERON:0001016,1.08e-34,75;UBERON:0002020,6.93e-34,34;UBERON:0001049,7.04e-34,52;UBERON:0005068,7.04e-34,52;UBERON:0006241,7.04e-34,52;UBERON:0007135,7.04e-34,52;UBERON:0004121,3.13e-31,95;UBERON:0000924,3.13e-31,95;UBERON:0006601,3.13e-31,95;UBERON:0010371,2.46e-30,73;UBERON:0000955,6.15e-28,47;UBERON:0006238,6.15e-28,47;UBERON:0003528,2.25e-27,29;UBERON:0002791,2.25e-27,29;UBERON:0001893,2.25e-27,29;UBERON:0002616,1.22e-26,46;UBERON:0003056,4.49e-26,49;UBERON:0003080,2.45e-24,40;UBERON:0002780,2.14e-23,39;UBERON:0001890,2.14e-23,39;UBERON:0006240,2.14e-23,39;UBERON:0010314,3.55e-21,92;UBERON:0000956,5.29e-18,21;UBERON:0001869,5.29e-18,21;UBERON:0000203,5.29e-18,21;UBERON:0002619,2.83e-14,17;UBERON:0002021,4.69e-14,10;UBERON:0000411,4.69e-14,10;UBERON:0001950,4.69e-14,10;UBERON:0002420,1.51e-10,8;UBERON:0007245,1.51e-10,8;UBERON:0010009,1.51e-10,8;UBERON:0010011,1.51e-10,8;UBERON:0000454,1.51e-10,8;UBERON:0003076,9.66e-10,12;UBERON:0003057,9.66e-10,12;UBERON:0000025,5.63e-09,114;UBERON:0002240,1.68e-08,6;UBERON:0005174,1.68e-08,6;UBERON:0001137,1.68e-08,6;UBERON:0000369,1.03e-07,5;UBERON:0002435,1.03e-07,5;UBERON:0000204,1.03e-07,5;UBERON:0010082,1.03e-07,5;UBERON:0004111,1.10e-07,122;UBERON:0001948,1.28e-07,5;UBERON:0002315,1.28e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,6.34789175126439,1.90149421051854,0,0,0,0,0,0.299600110518405,0,1.8664130215526,1.08004750665353,3.36519938162211,3.99911378165325,3.09215957332259,4.04219637409348,2.68367318851062,0.919218786610021,4.40463523997555,1.40456071893706,2.15049146558741,5.53922408466814,6.31264740856627,7.29278718779464,1.95428099300967,2.8138130501584,2.13917546887534,5.00868595305235,4.55589378557129,5.21918448310842,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,2.63502717310392,1.67557365450764,0,0,0,0,1.9472783122627,1.37250180845588,6.53402630986895,3.47648640384553,4.34716277461562,2.70124457927428,2.27137768294861,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,1.20563854268572,2.17716797284249,3.97152532883034,2.15513966487376,2.58703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,6.38008596751563,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.16296497644202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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12939 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91Y13 | |||
|association_with_transcript=-107bp_to_NM_009957,uc008epc.2_5end | |||
|cluster_id=chr18:37133453..37133470,+ | |||
|description=CAGE_peak_1_at_Pcdha7_5end | |||
|id=chr18:37133453..37133470,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.47e-17!23;CL:0000337!5.47e-17!23;CL:0000540!6.79e-17!33;CL:0000047!6.79e-17!33;CL:0000031!6.79e-17!33;CL:0000404!6.79e-17!33;CL:0000393!2.47e-12!39;CL:0000211!2.47e-12!39;CL:0000221!2.62e-12!44;CL:0000133!2.62e-12!44;CL:0002319!4.92e-12!43;CL:0000055!1.21e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-24,23;CL:0000337,1.88e-24,23;CL:0000540,2.50e-19,33;CL:0000047,2.50e-19,33;CL:0000031,2.50e-19,33;CL:0000404,2.50e-19,33;CL:0000393,3.58e-15,39;CL:0000211,3.58e-15,39;CL:0002319,4.58e-13,43;CL:0000221,1.33e-12,44;CL:0000133,1.33e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.99e-31!71;UBERON:0003075!1.99e-31!71;UBERON:0007284!1.99e-31!71;UBERON:0004121!7.41e-31!102;UBERON:0000924!7.41e-31!102;UBERON:0006601!7.41e-31!102;UBERON:0000073!5.94e-30!75;UBERON:0001016!5.94e-30!75;UBERON:0001017!7.81e-30!73;UBERON:0005743!7.81e-30!73;UBERON:0000033!1.03e-26!63;UBERON:0001049!1.84e-25!52;UBERON:0005068!1.84e-25!52;UBERON:0006241!1.84e-25!52;UBERON:0007135!1.84e-25!52;UBERON:0003056!4.88e-24!49;UBERON:0000955!1.22e-23!50;UBERON:0006238!1.22e-23!50;UBERON:0002616!9.09e-23!49;UBERON:0002020!3.16e-22!34;UBERON:0003080!6.87e-20!40;UBERON:0002780!2.83e-19!39;UBERON:0001890!2.83e-19!39;UBERON:0006240!2.83e-19!39;UBERON:0002791!3.53e-18!29;UBERON:0003528!3.53e-18!29;UBERON:0001893!3.53e-18!29;UBERON:0007811!1.21e-13!86;UBERON:0000956!2.46e-12!21;UBERON:0001869!2.46e-12!21;UBERON:0000203!2.46e-12!21;UBERON:0000153!2.88e-11!94;UBERON:0002619!5.21e-10!17;UBERON:0002021!2.56e-09!10;UBERON:0000411!2.56e-09!10;UBERON:0001950!2.56e-09!10;UBERON:0002420!3.90e-07!8;UBERON:0007245!3.90e-07!8;UBERON:0010009!3.90e-07!8;UBERON:0010011!3.90e-07!8;UBERON:0000454!3.90e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.33e-36,64;UBERON:0003075,1.33e-36,64;UBERON:0007284,1.33e-36,64;UBERON:0000073,4.05e-36,54;UBERON:0001017,4.69e-36,73;UBERON:0001016,1.08e-34,75;UBERON:0002020,6.93e-34,34;UBERON:0001049,7.04e-34,52;UBERON:0005068,7.04e-34,52;UBERON:0006241,7.04e-34,52;UBERON:0007135,7.04e-34,52;UBERON:0004121,3.13e-31,95;UBERON:0000924,3.13e-31,95;UBERON:0006601,3.13e-31,95;UBERON:0010371,2.46e-30,73;UBERON:0000955,6.15e-28,47;UBERON:0006238,6.15e-28,47;UBERON:0003528,2.25e-27,29;UBERON:0002791,2.25e-27,29;UBERON:0001893,2.25e-27,29;UBERON:0002616,1.22e-26,46;UBERON:0003056,4.49e-26,49;UBERON:0003080,2.45e-24,40;UBERON:0002780,2.14e-23,39;UBERON:0001890,2.14e-23,39;UBERON:0006240,2.14e-23,39;UBERON:0010314,3.55e-21,92;UBERON:0000956,5.29e-18,21;UBERON:0001869,5.29e-18,21;UBERON:0000203,5.29e-18,21;UBERON:0002619,2.83e-14,17;UBERON:0002021,4.69e-14,10;UBERON:0000411,4.69e-14,10;UBERON:0001950,4.69e-14,10;UBERON:0002420,1.51e-10,8;UBERON:0007245,1.51e-10,8;UBERON:0010009,1.51e-10,8;UBERON:0010011,1.51e-10,8;UBERON:0000454,1.51e-10,8;UBERON:0003076,9.66e-10,12;UBERON:0003057,9.66e-10,12;UBERON:0000025,5.63e-09,114;UBERON:0002240,1.68e-08,6;UBERON:0005174,1.68e-08,6;UBERON:0001137,1.68e-08,6;UBERON:0000369,1.03e-07,5;UBERON:0002435,1.03e-07,5;UBERON:0000204,1.03e-07,5;UBERON:0010082,1.03e-07,5;UBERON:0004111,1.10e-07,122;UBERON:0001948,1.28e-07,5;UBERON:0002315,1.28e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,6.34789175126439,1.90149421051854,0,0,0,0,0,0.299600110518405,0,1.8664130215526,1.08004750665353,3.36519938162211,3.99911378165325,3.09215957332259,4.04219637409348,2.68367318851062,0.919218786610021,4.40463523997555,1.40456071893706,2.15049146558741,5.53922408466814,6.31264740856627,7.29278718779464,1.95428099300967,2.8138130501584,2.13917546887534,5.00868595305235,4.55589378557129,5.21918448310842,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,2.63502717310392,1.67557365450764,0,0,0,0,1.9472783122627,1.37250180845588,6.53402630986895,3.47648640384553,4.34716277461562,2.70124457927428,2.27137768294861,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,1.20563854268572,2.17716797284249,3.97152532883034,2.15513966487376,2.58703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,6.38008596751563,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,3.21101179975584,1.87538698547525,0,0,1.26203287766503,0,1.07711698866399,0,0.445597348164788,0.283076530788832,0.404810701674894,1.75353514746787,0.395287777946524,6.10510501201433,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0,0,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,6.44455331110048,8.02053718815155,3.95262319390481,4.7955776383945,4.5323633843382,6.75022500231806,1.80128481289688,4.07828168085784,4.14208249401456,0,1.19707462020309,0.682934423016537,1.21553358534147,0.628839487883947,0.367687016900028,1.33348036680969,1.64828045791115,3.20919209591815,1.26348605881899,0.25347929989024,0.754505365544305,0.749132059759059,1.60062881012173,0.689225627467359,0,0.927074607558844,0.77163688185482,0.412085900803307,1.17759136107518,1.37147700954166,0.70990322463735,1.1921809497366,1.45346416632329,1.12931256498397,1.01537529470012,1.28049581010941,0.789209134313529,1.90125759384206,2.24456908663095,1.06771516311757,0.394017929502254,0.409231043169689,0.619747364743864,0.771626443924566,1.74867404556562,0.233931608445408,0.859484216193193,0.765153328275374,0.220591419119515,0 | |||
|short_description=p1@Pcdha7 | |||
}} |
Revision as of 17:46, 5 August 2015
Short description: | p1@Pcdha7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdha7_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -107bp_to_NM_009957, uc008epc.2_5end |
EntrezGene: | 12939 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.88e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.88e-24 | 23 |
neuron | 2.50e-19 | 33 |
neuronal stem cell | 2.50e-19 | 33 |
neuroblast | 2.50e-19 | 33 |
electrically signaling cell | 2.50e-19 | 33 |
electrically responsive cell | 3.58e-15 | 39 |
electrically active cell | 3.58e-15 | 39 |
neural cell | 4.58e-13 | 43 |
ectodermal cell | 1.33e-12 | 44 |
neurectodermal cell | 1.33e-12 | 44 |