FFCP PHASE1:Hg19::chr5:160112386..160112405,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13543 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000326831_5end | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_3_at_ATP10B_5end | |||
|id=chr5:160112386..160112405,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.01e-09;1!UBERON:0006242;1.01e-09;1!UBERON:0009143;2.17e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-19!115;UBERON:0004119!5.14e-17!169;UBERON:0000925!5.14e-17!169;UBERON:0006595!5.14e-17!169;UBERON:0004921!1.60e-15!129;UBERON:0004185!1.60e-15!129;UBERON:0001007!1.33e-13!155;UBERON:0001555!1.33e-13!155;UBERON:0007026!1.33e-13!155;UBERON:0000059!2.34e-10!11;UBERON:0000160!8.31e-10!27;UBERON:0006562!5.49e-09!11;UBERON:0000077!9.11e-09!130;UBERON:0005409!1.22e-08!35;UBERON:0001004!1.05e-07!72;UBERON:0000065!1.18e-07!53;UBERON:0003127!1.74e-07!2;UBERON:0001042!4.89e-07!10;UBERON:0009145!4.89e-07!10;UBERON:0003408!5.23e-07!10;UBERON:0003135!7.19e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.01e-37;17!UBERON:0005409;1.19e-28;22!UBERON:0000059;2.57e-27;11!UBERON:0004921;1.18e-24;33!UBERON:0003127;1.96e-17;2!UBERON:0002108;4.14e-16;4!UBERON:0001155;1.44e-15;9!UBERON:0004907;1.65e-15;5!UBERON:0006947;4.72e-12;3!UBERON:0004054;4.72e-12;3!UBERON:0001555;3.87e-10;54!UBERON:0001301;6.04e-10;1!UBERON:0001154;1.01e-09;1!UBERON:0001153;1.01e-09;1!UBERON:0009854;1.01e-09;1!UBERON:0002372;1.48e-09;1!UBERON:0001961;1.48e-09;1!UBERON:0001744;1.48e-09;1!UBERON:0001042;1.48e-09;1!UBERON:0001735;1.48e-09;1!UBERON:0001000;2.17e-09;1!UBERON:0005352;2.17e-09;1!UBERON:0005904;2.91e-09;4!UBERON:0001052;3.37e-09;4!UBERON:0001007;2.91e-08;81!UBERON:0000058;4.88e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.65e-37,17;UBERON:0000059,2.45e-27,11;UBERON:0005409,3.23e-25,25;UBERON:0003127,1.88e-17,2;UBERON:0002108,4.04e-16,4;UBERON:0001155,1.47e-15,9;UBERON:0004907,1.57e-15,5;UBERON:0006947,4.22e-12,3;UBERON:0004054,4.22e-12,3;UBERON:0004921,2.36e-11,118;UBERON:0004119,1.80e-10,160;UBERON:0000925,1.80e-10,160;UBERON:0006595,1.80e-10,160;UBERON:0001007,2.84e-10,145;UBERON:0001555,2.84e-10,145;UBERON:0007026,2.84e-10,145;UBERON:0001301,6.31e-10,1;UBERON:0001154,1.06e-09,1;UBERON:0001153,1.06e-09,1;UBERON:0001045,1.06e-09,1;UBERON:0002372,1.48e-09,1;UBERON:0001961,1.48e-09,1;UBERON:0001744,1.48e-09,1;UBERON:0001735,1.48e-09,1;UBERON:0001000,1.76e-09,1;UBERON:0005352,1.76e-09,1;UBERON:0005904,2.68e-09,4;UBERON:0001052,3.16e-09,4;UBERON:0007023,1.74e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,1.53135254993501,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3397729600055,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,8.56480138146558,0,0,0,0,0,4.47552936689023,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92789862985067,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8815482769626,19.814494448748,60.4919843484289,0,0,0,0,0,0,0,0,0,1.97292201424695,13.308978765353,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,17.472666824203,0,0,0,0,1.45483524732629,0,3.38971111170799,0,0,0,0,0,8.75157278431345,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,1.96190514319652,10.9579046461139,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.452888530700021,31.7185789823653,17.9218839613245,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0,0,0,0.917458566809082,0,0,0,0,15.870805215462,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0.267964130156178,0,0,2.55880778281177,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0.653150243690884,0.342233301085281,2.89613827962726,9.82594213879666,1.66330178273007,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@ATP10B | |||
}} |
Revision as of 08:47, 22 January 2014
Short description: | p3@ATP10B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP10B_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000326831_5end |
EntrezGene: | ATP10B |
HGNC: | 13543 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 5.65e-37 | 17 |
large intestine | 2.45e-27 | 11 |
gastrointestinal system | 3.23e-25 | 25 |
open tracheal system trachea | 1.88e-17 | 2 |
small intestine | 4.04e-16 | 4 |
colon | 1.47e-15 | 9 |
lower digestive tract | 1.57e-15 | 5 |
male genital duct | 4.22e-12 | 3 |
internal male genitalia | 4.22e-12 | 3 |
subdivision of digestive tract | 2.36e-11 | 118 |
endoderm-derived structure | 1.80e-10 | 160 |
endoderm | 1.80e-10 | 160 |
presumptive endoderm | 1.80e-10 | 160 |
digestive system | 2.84e-10 | 145 |
digestive tract | 2.84e-10 | 145 |
primitive gut | 2.84e-10 | 145 |
epididymis | 6.31e-10 | 1 |
vermiform appendix | 1.06e-09 | 1 |
caecum | 1.06e-09 | 1 |
midgut | 1.06e-09 | 1 |
tonsil | 1.48e-09 | 1 |
mucosa-associated lymphoid tissue | 1.48e-09 | 1 |
lymphoid tissue | 1.48e-09 | 1 |
tonsillar ring | 1.48e-09 | 1 |
vas deferens | 1.76e-09 | 1 |
spermatic cord | 1.76e-09 | 1 |
duct of male reproductive system | 2.68e-09 | 4 |
rectum | 3.16e-09 | 4 |
adult organism | 1.74e-08 | 114 |