FFCP PHASE1:Mm9::chr17:37004147..37004198,-: Difference between revisions
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{{FFCP|EntrezGene=69097|HGNC=|MCL_coexpression_id=12|UniProt=G3UY57,Q8R096|association_with_transcript=0bp_to_ENSMUST00000174195,NM_001177872,uc008cli.2,uc012asx.1_5end|description=CAGE_peak_2_at_Trim15_5end|id=chr17:37004147..37004198,-|ontology_enrichment_celltype=CL:0002563!6.00e-09!9;CL:0002251!6.00e-09!9;CL:0002076!8.73e-08!15;CL:0000239!9.47e-08!6;CL:0000677!9.47e-08!6;CL:0000212!9.47e-08!6;CL:0000584!9.47e-08!6|ontology_enrichment_celltype_v019_2=CL:0000239,4.00e-15,6;CL:0000677,4.00e-15,6;CL:0000584,4.00e-15,6;CL:0000075,7.44e-13,7;CL:0002563,7.94e-10,9;CL:0002251,7.94e-10,9;CL:0000066,4.88e-08,25;CL:0000682,6.51e-08,3;CL:0002076,2.96e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.05e-17!43;UBERON:0005409!2.17e-16!59;UBERON:0000344!7.82e-15!15;UBERON:0001242!4.38e-13!13;UBERON:0000060!4.38e-13!13;UBERON:0001262!4.38e-13!13;UBERON:0004786!4.38e-13!13;UBERON:0004923!1.98e-12!24;UBERON:0003350!6.00e-09!9;UBERON:0004808!6.00e-09!9;UBERON:0001277!6.00e-09!9;UBERON:0000485!7.36e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.17e-46,31;UBERON:0005409,3.67e-33,47;UBERON:0000344,7.77e-22,15;UBERON:0001242,4.03e-18,13;UBERON:0001262,4.03e-18,13;UBERON:0004786,4.03e-18,13;UBERON:0004923,4.82e-15,24;UBERON:0001007,9.56e-13,116;UBERON:0001555,9.56e-13,116;UBERON:0007026,9.56e-13,116;UBERON:0004119,2.04e-12,118;UBERON:0000925,2.04e-12,118;UBERON:0006595,2.04e-12,118;UBERON:0004921,5.98e-11,114;UBERON:0002108,3.16e-10,4;UBERON:0003350,7.94e-10,9;UBERON:0004808,7.94e-10,9;UBERON:0001277,7.94e-10,9;UBERON:0000331,4.43e-08,3;UBERON:0002116,4.43e-08,3;UBERON:0001204,4.43e-08,3;UBERON:0001168,4.43e-08,3;UBERON:0000485,6.72e-08,11|phase1_expression=0,12.563114675017,12.2849794635175,16.6355316218757,15.0268718983904,4.53274034162102,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,3.67054849707472,6.31655160526522,10.7690499039769,7.97243560937789,14.0617330397717,8.82105454159758,5.32153225572731,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.79928715803342,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,7.45567044872489,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7901523748335,15.6025834331491,0,0,0.77320476793256,2.42020229548011,7.33847544688072,8.3699275489526,12.3377556001573,10.2113351928887,10.304743560811,10.544693018181,10.3330966173134,7.19055526923377,11.4553166433588,7.76650965692032,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.938686832254841,0.42366414172764,0,0,0,0.241251699712623,0.119372344003136,0,9.03590593552537,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,1.09181281873089,0,0.165306911450672,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,2.74727436400898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,1.11123363900808,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.561849044819294,0.448176066834085,0.861532034334199,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,1.06485483695602,0.715308569841963,0.581385666529314,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.689531376628944,0.818462086339379,0.619747364743864,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p2@Trim15}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69097 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UY57,uniprot:Q8R096 | |||
|association_with_transcript=0bp_to_ENSMUST00000174195,NM_001177872,uc008cli.2,uc012asx.1_5end | |||
|cluster_id=chr17:37004147..37004198,- | |||
|description=CAGE_peak_2_at_Trim15_5end | |||
|id=chr17:37004147..37004198,- | |||
|ontology_enrichment_celltype=CL:0002563!6.00e-09!9;CL:0002251!6.00e-09!9;CL:0002076!8.73e-08!15;CL:0000239!9.47e-08!6;CL:0000677!9.47e-08!6;CL:0000212!9.47e-08!6;CL:0000584!9.47e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.00e-15,6;CL:0000677,4.00e-15,6;CL:0000584,4.00e-15,6;CL:0000075,7.44e-13,7;CL:0002563,7.94e-10,9;CL:0002251,7.94e-10,9;CL:0000066,4.88e-08,25;CL:0000682,6.51e-08,3;CL:0002076,2.96e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.05e-17!43;UBERON:0005409!2.17e-16!59;UBERON:0000344!7.82e-15!15;UBERON:0001242!4.38e-13!13;UBERON:0000060!4.38e-13!13;UBERON:0001262!4.38e-13!13;UBERON:0004786!4.38e-13!13;UBERON:0004923!1.98e-12!24;UBERON:0003350!6.00e-09!9;UBERON:0004808!6.00e-09!9;UBERON:0001277!6.00e-09!9;UBERON:0000485!7.36e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.17e-46,31;UBERON:0005409,3.67e-33,47;UBERON:0000344,7.77e-22,15;UBERON:0001242,4.03e-18,13;UBERON:0001262,4.03e-18,13;UBERON:0004786,4.03e-18,13;UBERON:0004923,4.82e-15,24;UBERON:0001007,9.56e-13,116;UBERON:0001555,9.56e-13,116;UBERON:0007026,9.56e-13,116;UBERON:0004119,2.04e-12,118;UBERON:0000925,2.04e-12,118;UBERON:0006595,2.04e-12,118;UBERON:0004921,5.98e-11,114;UBERON:0002108,3.16e-10,4;UBERON:0003350,7.94e-10,9;UBERON:0004808,7.94e-10,9;UBERON:0001277,7.94e-10,9;UBERON:0000331,4.43e-08,3;UBERON:0002116,4.43e-08,3;UBERON:0001204,4.43e-08,3;UBERON:0001168,4.43e-08,3;UBERON:0000485,6.72e-08,11 | |||
|phase1_expression=0,12.563114675017,12.2849794635175,16.6355316218757,15.0268718983904,4.53274034162102,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,3.67054849707472,6.31655160526522,10.7690499039769,7.97243560937789,14.0617330397717,8.82105454159758,5.32153225572731,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.79928715803342,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,7.45567044872489,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7901523748335,15.6025834331491,0,0,0.77320476793256,2.42020229548011,7.33847544688072,8.3699275489526,12.3377556001573,10.2113351928887,10.304743560811,10.544693018181,10.3330966173134,7.19055526923377,11.4553166433588,7.76650965692032,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.938686832254841,0.42366414172764,0,0,0,0.241251699712623,0.119372344003136,0,9.03590593552537,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,1.09181281873089,0,0.165306911450672,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,2.74727436400898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,1.11123363900808,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.561849044819294,0.448176066834085,0.861532034334199,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,1.06485483695602,0.715308569841963,0.581385666529314,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.689531376628944,0.818462086339379,0.619747364743864,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p2@Trim15 | |||
}} |
Revision as of 20:48, 4 August 2015
Short description: | p2@Trim15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trim15_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000174195, NM_001177872, uc008cli.2, uc012asx.1_5end |
EntrezGene: | 69097 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.00e-15 | 6 |
gut absorptive cell | 4.00e-15 | 6 |
enterocyte | 4.00e-15 | 6 |
columnar/cuboidal epithelial cell | 7.44e-13 | 7 |
intestinal epithelial cell | 7.94e-10 | 9 |
epithelial cell of alimentary canal | 7.94e-10 | 9 |
epithelial cell | 4.88e-08 | 25 |
M cell of gut | 6.51e-08 | 3 |
endo-epithelial cell | 2.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.17e-46 | 31 |
gastrointestinal system | 3.67e-33 | 47 |
mucosa | 7.77e-22 | 15 |
intestinal mucosa | 4.03e-18 | 13 |
wall of intestine | 4.03e-18 | 13 |
gastrointestinal system mucosa | 4.03e-18 | 13 |
organ component layer | 4.82e-15 | 24 |
digestive system | 9.56e-13 | 116 |
digestive tract | 9.56e-13 | 116 |
primitive gut | 9.56e-13 | 116 |
endoderm-derived structure | 2.04e-12 | 118 |
endoderm | 2.04e-12 | 118 |
presumptive endoderm | 2.04e-12 | 118 |
subdivision of digestive tract | 5.98e-11 | 114 |
small intestine | 3.16e-10 | 4 |
epithelium of mucosa | 7.94e-10 | 9 |
gastrointestinal system epithelium | 7.94e-10 | 9 |
intestinal epithelium | 7.94e-10 | 9 |
ileal mucosa | 4.43e-08 | 3 |
ileum | 4.43e-08 | 3 |
mucosa of small intestine | 4.43e-08 | 3 |
wall of small intestine | 4.43e-08 | 3 |
simple columnar epithelium | 6.72e-08 | 11 |