FFCP PHASE1:Mm9::chr17:35479244..35479275,+: Difference between revisions
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{{FFCP|EntrezGene=15013|HGNC=|MCL_coexpression_id=217|UniProt=Q4KN81|association_with_transcript=-2bp_to_NM_010392,uc008chl.1_5end|description=CAGE_peak_1_at_H2-Q2_5end|id=chr17:35479244..35479275,+|ontology_enrichment_celltype=CL:0002563!6.61e-07!9;CL:0002251!6.61e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.10e-09,9;CL:0002251,3.10e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.08e-18!43;UBERON:0005409!2.73e-16!59;UBERON:0001007!6.01e-11!128;UBERON:0001555!6.01e-11!128;UBERON:0007026!6.01e-11!128;UBERON:0000344!9.26e-11!15;UBERON:0004119!1.08e-10!130;UBERON:0000925!1.08e-10!130;UBERON:0006595!1.08e-10!130;UBERON:0004921!4.44e-10!126;UBERON:0004185!4.44e-10!126;UBERON:0001242!1.34e-09!13;UBERON:0000060!1.34e-09!13;UBERON:0001262!1.34e-09!13;UBERON:0004786!1.34e-09!13;UBERON:0003350!6.61e-07!9;UBERON:0004808!6.61e-07!9;UBERON:0001277!6.61e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.50e-27,31;UBERON:0005409,4.52e-22,47;UBERON:0000344,9.46e-15,15;UBERON:0001242,4.36e-13,13;UBERON:0001262,4.36e-13,13;UBERON:0004786,4.36e-13,13;UBERON:0003350,3.10e-09,9;UBERON:0004808,3.10e-09,9;UBERON:0001277,3.10e-09,9;UBERON:0004923,3.09e-08,24;UBERON:0000485,4.46e-07,11|phase1_expression=0,173.789753004402,135.134774098692,187.527811010235,274.991755740545,4.53274034162102,5.13947809310157,0,0,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,13.759348360233,21.7938817013812,84.412098724908,88.3062092126103,66.5806108999397,71.8288525545093,72.0806171113402,28.8249663851896,0,0,0,33.7956395108991,37.0703259149438,35.5254679896522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0,0,0,1.10115880999389,0.383062014255563,0.46081959976873,0,0,0,0.279182999001381,1.12552522006336,0.30559649555362,0,0.427115042397309,0,0.075726193333184,0,0,2.58127163094416,3.39985666853875,0,0.649776417447669,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,6.8510327831436,0,0,0,0,0,0,0,1.0053327306374,1.48316980640624,0,0,0,0,0,39.1422698558057,0,0,421.248684038967,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0,0,0.62336413367868,0.811206315338788,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0,0,0.462801338662135,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,1416.17490386856,369.701892195635,0.426576501070468,0.464473343720877,8.89185483122444,46.3872106633688,70.9385959865136,144.95192709777,562.791466991791,231.731429296683,283.757450735504,295.052448037027,244.874893421615,418.849844432867,414.552779659664,508.208529345145,0.379335801906163,0,0,0.407302655690628,0.969762435838129,1.1221731182451,5.56481526693464,1.32849133181642,2.35498091762062,0.987177311374404,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.810676133875177,0,1.43768206527355,0.744281895337007,1.5601883655728,0.252578877947112,1.4351793081753,0.482443521363367,0.184753190166605,1.13694847062291,0.977789858652155,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.956728611944923,0.491589944147214,0,0,0,0,0.491764273019036,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,1.21390318077491,0.604647113929502,1.13163047853539,0,0.307435147943927,90.1914743157092,2.54473610634254,1.42598951353889,0.316036757935816,0,0,11.234506989875,0,0.129358683782755,0.857348140126369,1.95074257006501,2.31879462882692,1.48094118541909,1.8267896946876,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0,0,459.956760201904,0.370850604021019,0,0,0,0,0,0,0,0,0,2.86401185404534,0.316335993581135,0.406638934253697,4.96824567780286,2.71814784818809,16.8139174084557,0.269728692769641,1.98368293740806,0,186.645561540182,0,0,0,0,0,0,0,0,0.2604087696879,0.314578033277133,0,0,1.58005560314089,0,0,0.25984164595559,0.179026695667481,0.596044064343795,0.240390899039938,0.443068581523732,0.403865799792591,0.914481679859998,1.00826185136841,0.779663045918019,0.865906574762965,0.584384510907845,0,0,0,0,0.19318959403219,0.375364950902364,0,0,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,1.10306105070008,7.3341420174533,4.73880631649457,7.06022261101994,3.03236654116557,3.04175159868288,5.09291121742406,6.74218853783153,5.95433917365284,6.37533705407307,4.76293691283074,6.2577536010222,5.40145817298374,6.1812885120496,3.82717192349433,3.42869252385415,4.08194354166476,7.39152188836695,3.19762116591123,4.23492211868988,5.58456412085065,5.12198324043763,4.47218509444333,8.55565917228929,2.24456908663095,5.10130577933949,7.09232273104057,0.818462086339379,5.42278944150881,2.12197272079256,0,5.6143586026898,12.8922632428979,0,0,0|short_description=p1@H2-Q2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15013 | |||
|HGNC= | |||
|MCL_coexpression_id=217 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q4KN81 | |||
|association_with_transcript=-2bp_to_NM_010392,uc008chl.1_5end | |||
|cluster_id=chr17:35479244..35479275,+ | |||
|description=CAGE_peak_1_at_H2-Q2_5end | |||
|id=chr17:35479244..35479275,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.61e-07!9;CL:0002251!6.61e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.10e-09,9;CL:0002251,3.10e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.08e-18!43;UBERON:0005409!2.73e-16!59;UBERON:0001007!6.01e-11!128;UBERON:0001555!6.01e-11!128;UBERON:0007026!6.01e-11!128;UBERON:0000344!9.26e-11!15;UBERON:0004119!1.08e-10!130;UBERON:0000925!1.08e-10!130;UBERON:0006595!1.08e-10!130;UBERON:0004921!4.44e-10!126;UBERON:0004185!4.44e-10!126;UBERON:0001242!1.34e-09!13;UBERON:0000060!1.34e-09!13;UBERON:0001262!1.34e-09!13;UBERON:0004786!1.34e-09!13;UBERON:0003350!6.61e-07!9;UBERON:0004808!6.61e-07!9;UBERON:0001277!6.61e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.50e-27,31;UBERON:0005409,4.52e-22,47;UBERON:0000344,9.46e-15,15;UBERON:0001242,4.36e-13,13;UBERON:0001262,4.36e-13,13;UBERON:0004786,4.36e-13,13;UBERON:0003350,3.10e-09,9;UBERON:0004808,3.10e-09,9;UBERON:0001277,3.10e-09,9;UBERON:0004923,3.09e-08,24;UBERON:0000485,4.46e-07,11 | |||
|phase1_expression=0,173.789753004402,135.134774098692,187.527811010235,274.991755740545,4.53274034162102,5.13947809310157,0,0,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,13.759348360233,21.7938817013812,84.412098724908,88.3062092126103,66.5806108999397,71.8288525545093,72.0806171113402,28.8249663851896,0,0,0,33.7956395108991,37.0703259149438,35.5254679896522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0,0,0,1.10115880999389,0.383062014255563,0.46081959976873,0,0,0,0.279182999001381,1.12552522006336,0.30559649555362,0,0.427115042397309,0,0.075726193333184,0,0,2.58127163094416,3.39985666853875,0,0.649776417447669,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,6.8510327831436,0,0,0,0,0,0,0,1.0053327306374,1.48316980640624,0,0,0,0,0,39.1422698558057,0,0,421.248684038967,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0,0,0.62336413367868,0.811206315338788,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0,0,0.462801338662135,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,1416.17490386856,369.701892195635,0.426576501070468,0.464473343720877,8.89185483122444,46.3872106633688,70.9385959865136,144.95192709777,562.791466991791,231.731429296683,283.757450735504,295.052448037027,244.874893421615,418.849844432867,414.552779659664,508.208529345145,0.379335801906163,0,0,0.407302655690628,0.969762435838129,1.1221731182451,5.56481526693464,1.32849133181642,2.35498091762062,0.987177311374404,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.810676133875177,0,1.43768206527355,0.744281895337007,1.5601883655728,0.252578877947112,1.4351793081753,0.482443521363367,0.184753190166605,1.13694847062291,0.977789858652155,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.956728611944923,0.491589944147214,0,0,0,0,0.491764273019036,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,1.21390318077491,0.604647113929502,1.13163047853539,0,0.307435147943927,90.1914743157092,2.54473610634254,1.42598951353889,0.316036757935816,0,0,11.234506989875,0,0.129358683782755,0.857348140126369,1.95074257006501,2.31879462882692,1.48094118541909,1.8267896946876,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0,0,459.956760201904,0.370850604021019,0,0,0,0,0,0,0,0,0,2.86401185404534,0.316335993581135,0.406638934253697,4.96824567780286,2.71814784818809,16.8139174084557,0.269728692769641,1.98368293740806,0,186.645561540182,0,0,0,0,0,0,0,0,0.2604087696879,0.314578033277133,0,0,1.58005560314089,0,0,0.25984164595559,0.179026695667481,0.596044064343795,0.240390899039938,0.443068581523732,0.403865799792591,0.914481679859998,1.00826185136841,0.779663045918019,0.865906574762965,0.584384510907845,0,0,0,0,0.19318959403219,0.375364950902364,0,0,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,1.10306105070008,7.3341420174533,4.73880631649457,7.06022261101994,3.03236654116557,3.04175159868288,5.09291121742406,6.74218853783153,5.95433917365284,6.37533705407307,4.76293691283074,6.2577536010222,5.40145817298374,6.1812885120496,3.82717192349433,3.42869252385415,4.08194354166476,7.39152188836695,3.19762116591123,4.23492211868988,5.58456412085065,5.12198324043763,4.47218509444333,8.55565917228929,2.24456908663095,5.10130577933949,7.09232273104057,0.818462086339379,5.42278944150881,2.12197272079256,0,5.6143586026898,12.8922632428979,0,0,0 | |||
|short_description=p1@H2-Q2 | |||
}} |
Revision as of 19:33, 4 August 2015
Short description: | p1@H2-Q2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2-Q2_5end |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | -2bp_to_NM_010392, uc008chl.1_5end |
EntrezGene: | 15013 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.10e-09 | 9 |
epithelial cell of alimentary canal | 3.10e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.50e-27 | 31 |
gastrointestinal system | 4.52e-22 | 47 |
mucosa | 9.46e-15 | 15 |
intestinal mucosa | 4.36e-13 | 13 |
wall of intestine | 4.36e-13 | 13 |
gastrointestinal system mucosa | 4.36e-13 | 13 |
epithelium of mucosa | 3.10e-09 | 9 |
gastrointestinal system epithelium | 3.10e-09 | 9 |
intestinal epithelium | 3.10e-09 | 9 |
organ component layer | 3.09e-08 | 24 |
simple columnar epithelium | 4.46e-07 | 11 |