FFCP PHASE1:Mm9::chr17:34686319..34686322,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34686319..34686322,-|id=chr17:34686319..34686322,-|ontology_enrichment_celltype=CL:0000239!6.20e-11!6;CL:0000677!6.20e-11!6;CL:0000212!6.20e-11!6;CL:0000584!6.20e-11!6;CL:0000075!2.59e-09!7;CL:0000473!3.10e-08!3;CL:0000627!3.10e-08!3;CL:0000682!3.10e-08!3;CL:0002563!3.76e-07!9;CL:0002251!3.76e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-13,6;CL:0000677,1.12e-13,6;CL:0000584,1.12e-13,6;CL:0000075,9.44e-12,7;CL:0002563,3.54e-09,9;CL:0002251,3.54e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.58e-27!43;UBERON:0000344!1.07e-18!15;UBERON:0005409!3.04e-18!59;UBERON:0001242!9.11e-15!13;UBERON:0000060!9.11e-15!13;UBERON:0001262!9.11e-15!13;UBERON:0004786!9.11e-15!13;UBERON:0004923!8.38e-11!24;UBERON:0000331!6.77e-08!3;UBERON:0002116!6.77e-08!3;UBERON:0001204!6.77e-08!3;UBERON:0001168!6.77e-08!3;UBERON:0003350!3.76e-07!9;UBERON:0004808!3.76e-07!9;UBERON:0001277!3.76e-07!9;UBERON:0001007!4.65e-07!128;UBERON:0001555!4.65e-07!128;UBERON:0007026!4.65e-07!128;UBERON:0004119!7.27e-07!130;UBERON:0000925!7.27e-07!130;UBERON:0006595!7.27e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.30e-44,31;UBERON:0005409,3.51e-28,47;UBERON:0001242,1.09e-13,13;UBERON:0001262,1.09e-13,13;UBERON:0004786,1.09e-13,13;UBERON:0000344,8.30e-12,15;UBERON:0004921,2.90e-10,114;UBERON:0001007,4.80e-10,116;UBERON:0001555,4.80e-10,116;UBERON:0007026,4.80e-10,116;UBERON:0004119,7.81e-10,118;UBERON:0000925,7.81e-10,118;UBERON:0006595,7.81e-10,118;UBERON:0003350,3.54e-09,9;UBERON:0004808,3.54e-09,9;UBERON:0001277,3.54e-09,9;UBERON:0000485,1.56e-07,11;UBERON:0004923,3.33e-07,24|phase1_expression=0,1.39590163055744,1.81999695755814,4.23449895829562,5.50985302940982,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,2.8711598205751,0.430761996159075,0.861884930743556,0.190023419456374,2.01624103807945,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,2.11560453330835,0,0,0,0.403367049246685,0,1.14135375667535,4.74529061544512,1.4822905925161,0.502670417600539,3.58121649674071,1.9496408711912,1.79763881730844,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr17:34686319..34686322,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:34686319..34686322,- | |||
|description=CAGE_peak_at_chr17:34686319..34686322,- | |||
|id=chr17:34686319..34686322,- | |||
|ontology_enrichment_celltype=CL:0000239!6.20e-11!6;CL:0000677!6.20e-11!6;CL:0000212!6.20e-11!6;CL:0000584!6.20e-11!6;CL:0000075!2.59e-09!7;CL:0000473!3.10e-08!3;CL:0000627!3.10e-08!3;CL:0000682!3.10e-08!3;CL:0002563!3.76e-07!9;CL:0002251!3.76e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-13,6;CL:0000677,1.12e-13,6;CL:0000584,1.12e-13,6;CL:0000075,9.44e-12,7;CL:0002563,3.54e-09,9;CL:0002251,3.54e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.58e-27!43;UBERON:0000344!1.07e-18!15;UBERON:0005409!3.04e-18!59;UBERON:0001242!9.11e-15!13;UBERON:0000060!9.11e-15!13;UBERON:0001262!9.11e-15!13;UBERON:0004786!9.11e-15!13;UBERON:0004923!8.38e-11!24;UBERON:0000331!6.77e-08!3;UBERON:0002116!6.77e-08!3;UBERON:0001204!6.77e-08!3;UBERON:0001168!6.77e-08!3;UBERON:0003350!3.76e-07!9;UBERON:0004808!3.76e-07!9;UBERON:0001277!3.76e-07!9;UBERON:0001007!4.65e-07!128;UBERON:0001555!4.65e-07!128;UBERON:0007026!4.65e-07!128;UBERON:0004119!7.27e-07!130;UBERON:0000925!7.27e-07!130;UBERON:0006595!7.27e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.30e-44,31;UBERON:0005409,3.51e-28,47;UBERON:0001242,1.09e-13,13;UBERON:0001262,1.09e-13,13;UBERON:0004786,1.09e-13,13;UBERON:0000344,8.30e-12,15;UBERON:0004921,2.90e-10,114;UBERON:0001007,4.80e-10,116;UBERON:0001555,4.80e-10,116;UBERON:0007026,4.80e-10,116;UBERON:0004119,7.81e-10,118;UBERON:0000925,7.81e-10,118;UBERON:0006595,7.81e-10,118;UBERON:0003350,3.54e-09,9;UBERON:0004808,3.54e-09,9;UBERON:0001277,3.54e-09,9;UBERON:0000485,1.56e-07,11;UBERON:0004923,3.33e-07,24 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,4.23449895829562,5.50985302940982,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,2.8711598205751,0.430761996159075,0.861884930743556,0.190023419456374,2.01624103807945,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,2.11560453330835,0,0,0,0.403367049246685,0,1.14135375667535,4.74529061544512,1.4822905925161,0.502670417600539,3.58121649674071,1.9496408711912,1.79763881730844,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:34686319..34686322,- | |||
}} |
Latest revision as of 17:27, 4 August 2015
Short description: | p@chr17:34686319..34686322, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34686319..34686322, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.12e-13 | 6 |
gut absorptive cell | 1.12e-13 | 6 |
enterocyte | 1.12e-13 | 6 |
columnar/cuboidal epithelial cell | 9.44e-12 | 7 |
intestinal epithelial cell | 3.54e-09 | 9 |
epithelial cell of alimentary canal | 3.54e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.30e-44 | 31 |
gastrointestinal system | 3.51e-28 | 47 |
intestinal mucosa | 1.09e-13 | 13 |
wall of intestine | 1.09e-13 | 13 |
gastrointestinal system mucosa | 1.09e-13 | 13 |
mucosa | 8.30e-12 | 15 |
subdivision of digestive tract | 2.90e-10 | 114 |
digestive system | 4.80e-10 | 116 |
digestive tract | 4.80e-10 | 116 |
primitive gut | 4.80e-10 | 116 |
endoderm-derived structure | 7.81e-10 | 118 |
endoderm | 7.81e-10 | 118 |
presumptive endoderm | 7.81e-10 | 118 |
epithelium of mucosa | 3.54e-09 | 9 |
gastrointestinal system epithelium | 3.54e-09 | 9 |
intestinal epithelium | 3.54e-09 | 9 |
simple columnar epithelium | 1.56e-07 | 11 |
organ component layer | 3.33e-07 | 24 |