FFCP PHASE1:Hg19::chr5:149829244..149829255,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10387 | |||
|TSSclassifier=strong | |||
|UniProt=P62263 | |||
|association_with_transcript=3bp_to_ENST00000312037_5end | |||
|description=CAGE_peak_4_at_RPS14_5end | |||
|id=chr5:149829244..149829255,- | |||
|ontology_enrichment_celltype=CL:0002321!3.31e-28!248;CL:0000220!3.64e-27!246;CL:0000066!1.12e-22!254;CL:0000222!1.82e-18!119;CL:0000548!1.30e-16!679;CL:0000004!1.30e-16!679;CL:0000255!1.30e-16!679;CL:0000012!1.99e-16!682;CL:0000393!3.24e-11!60;CL:0000211!3.24e-11!60;CL:0000055!2.15e-10!180;CL:0000183!4.58e-10!59;CL:0000680!1.34e-09!57;CL:0000056!1.34e-09!57;CL:0000355!1.34e-09!57;CL:0000187!2.78e-09!54;CL:0000144!4.88e-09!625;CL:0000003!1.06e-08!722;CL:0000213!1.71e-08!57;CL:0000215!1.71e-08!57;CL:0000359!3.34e-08!32;CL:0000071!4.26e-08!18;CL:0002546!4.26e-08!18;CL:0000076!9.21e-08!62;CL:0002078!1.12e-07!44;CL:0000192!1.12e-07!42;CL:0000514!1.12e-07!42;CL:0002139!5.90e-07!24;CL:0000115!6.72e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000071;9.66e-09;18!CL:0000359;8.75e-08;32!CL:0002139;2.59e-07;24!CL:0000115;2.95e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.08e-26,250;CL:0000066,7.20e-22,253;CL:0000222,1.10e-18,121;CL:0000393,1.77e-10,61;CL:0000211,1.77e-10,61;CL:0000213,2.35e-09,58;CL:0000215,2.35e-09,58;CL:0002078,7.45e-09,45;CL:0000680,7.97e-09,58;CL:0000056,7.97e-09,58;CL:0000355,7.97e-09,58;CL:0000071,8.98e-09,18;CL:0002546,8.98e-09,18;CL:0000187,1.82e-08,55;CL:0000115,2.68e-08,36;CL:0000359,3.30e-08,32;CL:0000192,2.58e-07,43;CL:0000514,2.58e-07,43;CL:0002139,3.00e-07,24;CL:0000076,9.64e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;9.66e-09;18 | |||
|ontology_enrichment_disease=DOID:14566!7.43e-15!239;DOID:162!1.18e-14!235;DOID:0050687!1.00e-08!143;DOID:305!1.38e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.46e-13,235;DOID:14566,7.98e-13,239;DOID:0050687,4.16e-08,143;DOID:305,3.70e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.06e-14!118;UBERON:0000490!1.13e-13!138;UBERON:0003104!1.85e-12!238;UBERON:0009142!1.85e-12!238;UBERON:0002049!1.88e-12!79;UBERON:0007798!1.88e-12!79;UBERON:0004872!8.72e-12!84;UBERON:0001981!2.39e-11!60;UBERON:0007500!2.39e-11!60;UBERON:0004537!2.39e-11!60;UBERON:0006965!2.39e-11!60;UBERON:0001637!3.23e-11!42;UBERON:0003509!3.23e-11!42;UBERON:0004572!3.23e-11!42;UBERON:0002100!6.98e-11!216;UBERON:0000486!7.19e-11!82;UBERON:0000055!9.28e-11!69;UBERON:0000119!2.65e-10!312;UBERON:0005256!4.31e-10!143;UBERON:0004290!4.39e-10!70;UBERON:0000483!1.03e-09!309;UBERON:0000914!8.79e-09!83;UBERON:0002329!8.79e-09!83;UBERON:0003077!8.79e-09!83;UBERON:0003059!8.79e-09!83;UBERON:0007282!8.79e-09!83;UBERON:0009618!8.79e-09!83;UBERON:0007285!8.79e-09!83;UBERON:0000487!1.93e-08!22;UBERON:0006914!3.08e-08!25;UBERON:0001986!4.26e-08!18;UBERON:0004638!4.26e-08!18;UBERON:0004852!4.26e-08!18;UBERON:0004535!4.76e-08!110;UBERON:0001009!6.66e-08!113;UBERON:0004573!8.20e-08!33;UBERON:0004571!8.20e-08!33;UBERON:0001134!9.24e-08!61;UBERON:0002036!9.24e-08!61;UBERON:0003082!9.24e-08!61;UBERON:0002385!6.72e-07!63;UBERON:0001015!6.72e-07!63;UBERON:0000383!6.72e-07!63;UBERON:0000481!9.72e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;2.73e-09;33!UBERON:0000487;3.80e-09;22!UBERON:0006914;4.69e-09;25!UBERON:0004638;9.66e-09;18!UBERON:0001986;9.66e-09;18!UBERON:0004852;9.66e-09;18!UBERON:0001637;1.78e-08;42!UBERON:0003509;1.78e-08;42!UBERON:0004572;1.78e-08;42!UBERON:0003914;2.75e-08;74!UBERON:0007500;2.02e-07;56!UBERON:0001981;2.02e-07;56!UBERON:0004537;2.02e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.38e-14,148;UBERON:0003914,4.99e-14,117;UBERON:0007503,3.64e-12,78;UBERON:0002049,4.57e-12,78;UBERON:0007798,4.57e-12,78;UBERON:0007500,1.38e-11,59;UBERON:0001981,1.38e-11,59;UBERON:0004537,1.38e-11,59;UBERON:0006965,1.38e-11,59;UBERON:0004872,3.62e-11,83;UBERON:0001637,5.97e-11,42;UBERON:0003509,5.97e-11,42;UBERON:0004572,5.97e-11,42;UBERON:0000486,1.51e-10,83;UBERON:0002100,2.20e-10,199;UBERON:0000055,3.19e-10,68;UBERON:0002329,5.88e-10,71;UBERON:0003059,5.88e-10,71;UBERON:0007282,5.88e-10,71;UBERON:0004290,5.88e-10,71;UBERON:0009618,5.88e-10,71;UBERON:0003077,7.43e-10,72;UBERON:0007285,7.43e-10,72;UBERON:0007524,8.15e-10,73;UBERON:0000487,3.76e-09,22;UBERON:0006914,6.30e-09,25;UBERON:0004638,8.98e-09,18;UBERON:0001986,8.98e-09,18;UBERON:0004852,8.98e-09,18;UBERON:0005256,9.04e-09,122;UBERON:0004535,1.20e-08,109;UBERON:0001009,2.59e-08,112;UBERON:0003104,3.68e-08,160;UBERON:0009142,3.68e-08,160;UBERON:0000119,1.00e-07,309;UBERON:0001134,1.70e-07,62;UBERON:0002036,1.70e-07,62;UBERON:0003082,1.70e-07,62;UBERON:0004573,2.52e-07,33;UBERON:0004571,2.52e-07,33;UBERON:0000483,3.38e-07,306;UBERON:0002385,9.06e-07,64;UBERON:0001015,9.06e-07,64;UBERON:0000383,9.06e-07,64 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,1.0007329835313,2.68176656656373,3.48935409640147,0,3.79031924056099,1.04474251279935,5.16041266653169,47.4504794221251,2.83973783769224,3.16520373874144,0,0.662794751455832,2.01697543935533,5.42425075221579,3.65155045193687,3.41552959153355,2.95490539384291,7.75202626728161,1.56727360739044,0,5.33810257784248,2.00868223351684,2.36881557818649,4.51553241974702,3.46327437780189,0,0.383829398097213,0,45.0516399994674,24.6988853398165,4.06729411183466,2.55641761914995,2.27470771979874,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0,1.32171328579026,0,1.31692042387539,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.390178042679635,0.328875809207352,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.434473211648397,7.31420598941885,3.35350429851818,3.19656404608826,2.1686349143074,2.00535164254356,0.289693037921647,0.795285947051099,1.45990461090791,0.945348171640679,3.99112915432615,3.33772185633879,0.458426764241994,1.45718115317017,5.56176664176644,0,0.174129737299267,0.930705723632056,0,0,0.371457501329565,3.9752481473341,12.9035189265919,10.0670745466202,6.78369530308812,5.87299210693868,7.97842321626196,9.19577852761967,1.55050055501597,0.71153252537342,1.00416183829401,1.61131726843659,6.84244895146661,1.22031028774085,8.45625084795498,6.48113558305408,2.23249320710199,7.18493992403743,4.27923625836624,22.9974956198825,7.59412527654503,6.77846452542507,0,0,1.74437620857014,1.49091585508596,2.27934920996244,0.662045904066094,0.860509862246441,2.12801029319014,10.6528744027038,6.4049397437823,5.92002116201184,0.311211035399766,3.63718814588158,6.21155231831143,1.36221684880438,1.72852777344,2.57753575017176,5.30672130611545,9.12754914471119,2.09228152772521,4.22764195117554,5.50368010851647,5.75848307479219,0.816616685019573,2.33385202892359,0.826606249406124,0,0,0.910161361938026,3.59309070908119,0.336672227908132,2.37725187756732,0.831192346452549,0.438977620880838,1.83892677479412,0.45071417671979,8.50741373700158,0.358779271377724,0.213557388818567,0.635795703478686,0.900273288253207,1.03052529238439,1.03056216018252,0.744467425326359,1.18143432568886,1.16924406193438,1.00973509697646,0.368199594569197,0,1.06502877754984,0.705264687593482,1.3564847384839,4.05847791642923,4.63668405004419,7.1701148847251,11.9534232007003,16.0361019668997,9.76029120103954,11.19539394166,18.6717429647965,20.4387321082465,3.12899064659632,1.92972281457866,17.9575397758225,0.464367928031979,0,5.44211280183282,4.72037132218685,4.57920956778616,4.41175890929576,4.13970943775572,5.69449485866632,4.98875840192608,5.101758093259,3.07797725557112,2.21446636387394,4.20725321410337,2.057870056657,1.47008711385542,1.26755034821831,2.94848165003288,0.590789906681404,0.882926198829301,2.7057456479485,5.31860211925429,2.19500570817251,6.74410519545717,4.2222168412885,0.462942225792648,0.977424915930974,7.27954349695705,10.1031939417691,0.34779121492523,4.81375646366869,1.44366447761074,3.70388410061289,1.14152491340759,5.53143078571493,4.29243081047436,0.246217006087397,0.468008530278475,0.445893486866185,4.68669169933885,1.84780341018745,4.53680311175637,1.25381931783988,1.45316969256981,10.7347150166259,0,0.264145302039678,0,0,0,1.46045156871989,0.763976851116555,0,6.84289784090821,2.05654985406647,2.10240140490742,0,2.91540819297938,7.84728123899904,3.59357600522655,0,0,5.917119267892,0.531876233169741,1.04007436911366,2.05765899409714,15.6034045225606,3.46348832720929,0.285955987316295,0.542621605391443,2.46972101034231,4.88604276440603,0.355391948742546,5.543663110534,1.20575750823834,3.48613383440118,1.89948683245908,0,0,0,2.63587341040741,1.14861935834114,5.70547620162874,2.75084482668401,2.05476322550383,2.86497541183833,0.896681151948218,0,0,0.256686072559497,0.508189248444927,0,5.41302168944387,2.34522771468088,1.91381625495949,0,0,0,0.12269149171914,0,2.44138521329762,1.03985430765404,0.713715955188647,0.946214490203608,0.937131319941706,1.50473049863859,0,2.0694614258501,1.99267679560631,3.68738337083406,1.04260337361699,0.783204629850962,2.05886054286514,0,0,0.106727557803444,6.66880657181771,3.32870879020994,4.83824469327489,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,1.02341449813341,2.2519548960105,8.90508398669946,3.39261326365842,4.6166048581413,1.64254312027618,0.519254429183621,4.99704627377825,5.31781578203138,4.61164881697555,0.552485933615378,2.29628896329214,0.910455840033585,0.917870904715969,2.25599806453706,0.847168708148562,2.35304930753057,16.0753147118587,0.633309773357254,3.4120015221269,7.82431044271972,8.42072072798343,1.54227252690289,3.52230368807009,5.51858751240339,3.3133915495855,9.97291210714469,4.253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| |||
|short_description=p4@RPS14 | |||
}} |
Revision as of 08:20, 22 January 2014
Short description: | p4@RPS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPS14_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000312037_5end |
EntrezGene: | RPS14 |
HGNC: | 10387 |
UniProt: | P62263 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.08e-26 | 250 |
epithelial cell | 7.20e-22 | 253 |
mesodermal cell | 1.10e-18 | 121 |
electrically responsive cell | 1.77e-10 | 61 |
electrically active cell | 1.77e-10 | 61 |
lining cell | 2.35e-09 | 58 |
barrier cell | 2.35e-09 | 58 |
meso-epithelial cell | 7.45e-09 | 45 |
muscle precursor cell | 7.97e-09 | 58 |
myoblast | 7.97e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.97e-09 | 58 |
blood vessel endothelial cell | 8.98e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.98e-09 | 18 |
muscle cell | 1.82e-08 | 55 |
endothelial cell | 2.68e-08 | 36 |
vascular associated smooth muscle cell | 3.30e-08 | 32 |
smooth muscle cell | 2.58e-07 | 43 |
smooth muscle myoblast | 2.58e-07 | 43 |
endothelial cell of vascular tree | 3.00e-07 | 24 |
squamous epithelial cell | 9.64e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.46e-13 | 235 |
disease of cellular proliferation | 7.98e-13 | 239 |
cell type cancer | 4.16e-08 | 143 |
carcinoma | 3.70e-07 | 106 |