FFCP PHASE1:Mm9::chr17:13185054..13185092,-: Difference between revisions
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{{FFCP|EntrezGene=60532|HGNC=|UniProt=Q9ER69|association_with_transcript=0bp_to_ENSMUST00000159986_5end|description=CAGE_peak_1_at_Wtap_5end|id=chr17:13185054..13185092,-|ontology_enrichment_celltype=CL:0000988!2.22e-08!32;CL:0002032!2.22e-08!32;CL:0000037!2.22e-08!32;CL:0000566!2.22e-08!32;CL:0000837!2.22e-08!32;CL:0000542!6.82e-08!13;CL:0000051!6.82e-08!13;CL:0000838!1.52e-07!12;CL:0000084!6.56e-07!11;CL:0000827!6.56e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,2.22e-08,32;CL:0002032,2.22e-08,32;CL:0000037,2.22e-08,32;CL:0000837,2.22e-08,32;CL:0000542,6.82e-08,13;CL:0000051,6.82e-08,13;CL:0000838,1.52e-07,12;CL:0000084,6.56e-07,11;CL:0000827,6.56e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.51e-09!29;UBERON:0000065!2.21e-09!41;UBERON:0001004!2.24e-09!42;UBERON:0002390!2.76e-09!45;UBERON:0003061!2.76e-09!45;UBERON:0002193!6.69e-09!48;UBERON:0003081!3.29e-08!88;UBERON:0002370!6.34e-08!23;UBERON:0000974!6.34e-08!23;UBERON:0004807!6.34e-08!23;UBERON:0005058!6.34e-08!23;UBERON:0003351!6.34e-08!23;UBERON:0009113!6.34e-08!23;UBERON:0003295!6.34e-08!23;UBERON:0009722!6.34e-08!23;UBERON:0005562!6.34e-08!23;UBERON:0007690!6.34e-08!23;UBERON:0003408!7.36e-08!24;UBERON:0006562!3.84e-07!24;UBERON:0001557!3.84e-07!24;UBERON:0001042!3.84e-07!24;UBERON:0008814!3.84e-07!24;UBERON:0009145!3.84e-07!24;UBERON:0000072!6.17e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.51e-09,29;UBERON:0005057,1.51e-09,29;UBERON:0000065,2.21e-09,41;UBERON:0001004,2.24e-09,42;UBERON:0002390,2.76e-09,45;UBERON:0003061,2.76e-09,45;UBERON:0002193,6.69e-09,48;UBERON:0002405,6.69e-09,48;UBERON:0000153,2.61e-08,43;UBERON:0002370,6.34e-08,23;UBERON:0000974,6.34e-08,23;UBERON:0004807,6.34e-08,23;UBERON:0005058,6.34e-08,23;UBERON:0003351,6.34e-08,23;UBERON:0009113,6.34e-08,23;UBERON:0003295,6.34e-08,23;UBERON:0009722,6.34e-08,23;UBERON:0005562,6.34e-08,23;UBERON:0007690,6.34e-08,23;UBERON:0003408,7.36e-08,24;UBERON:0003081,8.85e-08,87;UBERON:0000077,1.06e-07,35;UBERON:0007811,2.70e-07,36;UBERON:0006562,3.84e-07,24;UBERON:0001557,3.84e-07,24;UBERON:0001042,3.84e-07,24;UBERON:0008814,3.84e-07,24;UBERON:0009145,3.84e-07,24;UBERON:0000072,6.17e-07,27|phase1_expression=43.7206352596087,24.7772539423946,27.7549536027617,29.6414927080693,20.5367249278002,33.9116129262017,30.1360306368228,69.0809780412433,60.398361803065,50.3238731592286,48.9683389124944,44.0342317654257,62.6594671548213,69.2369587158459,44.9698178451145,47.9866383713888,35.6776557845355,65.4583993118343,68.4201023692636,56.443823689138,21.2608225377674,51.4327127220586,45.7099630993137,29.1186209484,27.7585230091276,29.860062133981,27.1380057580217,26.7184328530502,27.7434192406306,30.4956457009516,27.4945833212578,27.9413496322238,19.6820732027062,0,38.7061170466708,31.750817263472,39.6088551148996,56.9203017802195,60.1628215283326,80.6226565719649,59.4113802911324,75.135003345429,63.6018562470811,38.1467358465999,39.4356262443912,37.0764439366597,16.4302182313088,6.97680500417429,14.9386604259441,16.5265414213141,16.5183977517928,7.18762821824858,64.931868544344,55.8528849348735,45.0365690850902,43.476844690075,42.9800159908135,42.2851115667503,28.5266209812033,28.5655128806898,22.1840991227163,14.2314703469035,8.00365316500025,11.6986963246582,16.8107281636386,10.6572017241915,8.68840320503374,12.2949857702897,43.5496371695606,35.3715558429029,37.2275181591946,16.2821061110168,26.7250934551452,45.321595709533,34.7919059796198,31.2534387447407,17.6185409599022,26.3035916455487,32.8717981168361,30.0700736024842,24.5186884854458,37.5057626800867,27.9182999001381,26.449842671489,32.0876320331301,33.2930301585245,35.7352918805748,31.1287074528252,32.6379893266023,29.3973368815396,53.3350659211087,24.0918685554788,34.6785380190953,17.2705021324101,25.3412802804591,25.0895056774508,25.8417733042423,30.8478883866285,30.1351765339328,29.6805242588686,44.7882074889844,56.4636500622998,30.5766287647975,28.4426681261332,33.5561113567382,35.4703811665138,38.9253822661383,28.0892344108888,67.5827876319118,26.7195850316685,32.2682707785013,31.9688752227748,24.4452427091422,31.953199797156,32.9248379979973,29.1546491884847,42.2703394825779,38.1742302268567,26.5383165584962,31.3827688897974,32.0220201767571,32.4866419600599,26.0948465705371,24.8863677459815,24.5052646971742,26.3120766864849,49.3638312964392,44.3928020935122,61.5019899033633,15.8778077769112,23.33253074375,24.6282530141214,24.6830534673033,23.5258220743904,29.5059023274575,18.8199865158599,47.2534648265468,36.4512423887573,41.4465323831227,30.0931853917658,44.7614323791701,42.5318893201925,44.835470321532,40.0874815443002,31.0926801121568,34.975045637764,33.6389191169427,28.7160741520307,40.3112146784415,51.247747725479,40.2928074335443,35.9481001181223,42.2631818822909,35.521720985261,39.7159523267331,38.0155449623322,45.6438571753603,38.3448381600926,51.4335933906023,32.7258720606093,34.9443829371833,32.7712951859047,33.3810077175146,36.007854409774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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:60532 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ER69 | |||
|association_with_transcript=0bp_to_ENSMUST00000159986_5end | |||
|cluster_id=chr17:13185054..13185092,- | |||
|description=CAGE_peak_1_at_Wtap_5end | |||
|id=chr17:13185054..13185092,- | |||
|ontology_enrichment_celltype=CL:0000988!2.22e-08!32;CL:0002032!2.22e-08!32;CL:0000037!2.22e-08!32;CL:0000566!2.22e-08!32;CL:0000837!2.22e-08!32;CL:0000542!6.82e-08!13;CL:0000051!6.82e-08!13;CL:0000838!1.52e-07!12;CL:0000084!6.56e-07!11;CL:0000827!6.56e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.22e-08,32;CL:0002032,2.22e-08,32;CL:0000037,2.22e-08,32;CL:0000837,2.22e-08,32;CL:0000542,6.82e-08,13;CL:0000051,6.82e-08,13;CL:0000838,1.52e-07,12;CL:0000084,6.56e-07,11;CL:0000827,6.56e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.51e-09!29;UBERON:0000065!2.21e-09!41;UBERON:0001004!2.24e-09!42;UBERON:0002390!2.76e-09!45;UBERON:0003061!2.76e-09!45;UBERON:0002193!6.69e-09!48;UBERON:0003081!3.29e-08!88;UBERON:0002370!6.34e-08!23;UBERON:0000974!6.34e-08!23;UBERON:0004807!6.34e-08!23;UBERON:0005058!6.34e-08!23;UBERON:0003351!6.34e-08!23;UBERON:0009113!6.34e-08!23;UBERON:0003295!6.34e-08!23;UBERON:0009722!6.34e-08!23;UBERON:0005562!6.34e-08!23;UBERON:0007690!6.34e-08!23;UBERON:0003408!7.36e-08!24;UBERON:0006562!3.84e-07!24;UBERON:0001557!3.84e-07!24;UBERON:0001042!3.84e-07!24;UBERON:0008814!3.84e-07!24;UBERON:0009145!3.84e-07!24;UBERON:0000072!6.17e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.51e-09,29;UBERON:0005057,1.51e-09,29;UBERON:0000065,2.21e-09,41;UBERON:0001004,2.24e-09,42;UBERON:0002390,2.76e-09,45;UBERON:0003061,2.76e-09,45;UBERON:0002193,6.69e-09,48;UBERON:0002405,6.69e-09,48;UBERON:0000153,2.61e-08,43;UBERON:0002370,6.34e-08,23;UBERON:0000974,6.34e-08,23;UBERON:0004807,6.34e-08,23;UBERON:0005058,6.34e-08,23;UBERON:0003351,6.34e-08,23;UBERON:0009113,6.34e-08,23;UBERON:0003295,6.34e-08,23;UBERON:0009722,6.34e-08,23;UBERON:0005562,6.34e-08,23;UBERON:0007690,6.34e-08,23;UBERON:0003408,7.36e-08,24;UBERON:0003081,8.85e-08,87;UBERON:0000077,1.06e-07,35;UBERON:0007811,2.70e-07,36;UBERON:0006562,3.84e-07,24;UBERON:0001557,3.84e-07,24;UBERON:0001042,3.84e-07,24;UBERON:0008814,3.84e-07,24;UBERON:0009145,3.84e-07,24;UBERON:0000072,6.17e-07,27 | |||
|phase1_expression=43.7206352596087,24.7772539423946,27.7549536027617,29.6414927080693,20.5367249278002,33.9116129262017,30.1360306368228,69.0809780412433,60.398361803065,50.3238731592286,48.9683389124944,44.0342317654257,62.6594671548213,69.2369587158459,44.9698178451145,47.9866383713888,35.6776557845355,65.4583993118343,68.4201023692636,56.443823689138,21.2608225377674,51.4327127220586,45.7099630993137,29.1186209484,27.7585230091276,29.860062133981,27.1380057580217,26.7184328530502,27.7434192406306,30.4956457009516,27.4945833212578,27.9413496322238,19.6820732027062,0,38.7061170466708,31.750817263472,39.6088551148996,56.9203017802195,60.1628215283326,80.6226565719649,59.4113802911324,75.135003345429,63.6018562470811,38.1467358465999,39.4356262443912,37.0764439366597,16.4302182313088,6.97680500417429,14.9386604259441,16.5265414213141,16.5183977517928,7.18762821824858,64.931868544344,55.8528849348735,45.0365690850902,43.476844690075,42.9800159908135,42.2851115667503,28.5266209812033,28.5655128806898,22.1840991227163,14.2314703469035,8.00365316500025,11.6986963246582,16.8107281636386,10.6572017241915,8.68840320503374,12.2949857702897,43.5496371695606,35.3715558429029,37.2275181591946,16.2821061110168,26.7250934551452,45.321595709533,34.7919059796198,31.2534387447407,17.6185409599022,26.3035916455487,32.8717981168361,30.0700736024842,24.5186884854458,37.5057626800867,27.9182999001381,26.449842671489,32.0876320331301,33.2930301585245,35.7352918805748,31.1287074528252,32.6379893266023,29.3973368815396,53.3350659211087,24.0918685554788,34.6785380190953,17.2705021324101,25.3412802804591,25.0895056774508,25.8417733042423,30.8478883866285,30.1351765339328,29.6805242588686,44.7882074889844,56.4636500622998,30.5766287647975,28.4426681261332,33.5561113567382,35.4703811665138,38.9253822661383,28.0892344108888,67.5827876319118,26.7195850316685,32.2682707785013,31.9688752227748,24.4452427091422,31.953199797156,32.9248379979973,29.1546491884847,42.2703394825779,38.1742302268567,26.5383165584962,31.3827688897974,32.0220201767571,32.4866419600599,26.0948465705371,24.8863677459815,24.5052646971742,26.3120766864849,49.3638312964392,44.3928020935122,61.5019899033633,15.8778077769112,23.33253074375,24.6282530141214,24.6830534673033,23.5258220743904,29.5059023274575,18.8199865158599,47.2534648265468,36.4512423887573,41.4465323831227,30.0931853917658,44.7614323791701,42.5318893201925,44.835470321532,40.0874815443002,31.0926801121568,34.975045637764,33.6389191169427,28.7160741520307,40.3112146784415,51.247747725479,40.2928074335443,35.9481001181223,42.2631818822909,35.521720985261,39.7159523267331,38.0155449623322,45.6438571753603,38.3448381600926,51.4335933906023,32.7258720606093,34.9443829371833,32.7712951859047,33.3810077175146,36.0078544097749,33.3216963836737,26.9739375910473,30.8514411609562,29.7751623036282,30.2790123840804,36.7735119537173,28.6172897696871,24.8539978623065,29.8588156795829,24.0229489581065,23.131894342054,31.2830021633025,25.1118275067686,21.6849464664106,45.2171091134696,45.2861510127855,41.1087201617478,32.0676804151115,34.4685967959549,25.3000082729704,27.9972146311262,29.645811850322,27.1442025504291,33.026774358831,31.7791462004166,24.268124033664,25.9365659849633,29.6720497149007,42.4856098134903,44.7854169430137,50.7184810528862,42.1558248639801,44.9969770228892,38.5045651197849,37.119847291939,28.3411484120836,31.399745568275,28.5047448659359,19.2694207606647,37.5401487861212,28.8941722816408,29.232074610031,35.7033813643765,27.4941962117755,29.7912246584261,29.3450060199827,30.9678283140318,24.7105271869273,44.5681440234799,29.7712758134803,24.6509761760503,18.9434158460334,24.0392534119362,21.2275149399882,38.0591571743206,42.6355676483591,43.837578662905,41.0783107575955,40.8361032021994,37.6889079244085,39.2772007461923,42.1488679372845,43.1920294850963,41.1924322746721,40.3420564703442,40.4742387347873,40.0629157928878,41.0803326371493,69.3639906120652,76.6907014184381,33.4399705652945,42.4942589309288,16.6972613587304,18.4022347949759,60.4919948439932,19.9452032491455,53.6363973007636,51.9283529914529,51.0553452626733,52.0951979536563,51.6892923871154,52.6522347267228,50.1965270076869,47.9299606974552,54.9450011345668,24.0990987316355,33.7817402795679,24.2169220987467,39.2557572042118,32.664084348562,33.1862845849907,37.1454373317122,25.6975023420038,33.0058889572822,20.9664343945349,37.8145231971031,40.3148137342425,37.0804404067056,37.4322247303957,30.6555655197742,36.8965130012496,40.2228618667929,36.7674774214091,44.6551513197649,29.3644212186853,42.2243959012237,42.5616560741457,38.8844022372514,33.8970982440369,32.8822145043767,32.384695712792,31.774810629573,26.6839361646504,39.4078144530137,36.3294960065787,36.2480678818217,28.4106178727465,30.5302073525814,26.8162369699463,20.5822085231666,42.5468493186653,44.3731766120928,44.6318810961005,41.6294289980367,44.0155413261701,43.0102965628263,47.2540035382918,46.3239307191308,43.9475916698068,25.7761066864081,41.9145191495004,38.63069875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| |||
|short_description=p1@Wtap | |||
}} |
Revision as of 07:53, 4 August 2015
Short description: | p1@Wtap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wtap_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000159986_5end |
EntrezGene: | 60532 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.22e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.22e-08 | 32 |
hematopoietic stem cell | 2.22e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.22e-08 | 32 |
lymphocyte | 6.82e-08 | 13 |
common lymphoid progenitor | 6.82e-08 | 13 |
lymphoid lineage restricted progenitor cell | 1.52e-07 | 12 |
T cell | 6.56e-07 | 11 |
pro-T cell | 6.56e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.51e-09 | 29 |
immune organ | 1.51e-09 | 29 |
respiratory tract | 2.21e-09 | 41 |
respiratory system | 2.24e-09 | 42 |
hematopoietic system | 2.76e-09 | 45 |
blood island | 2.76e-09 | 45 |
hemolymphoid system | 6.69e-09 | 48 |
immune system | 6.69e-09 | 48 |
anterior region of body | 2.61e-08 | 43 |
thymus | 6.34e-08 | 23 |
neck | 6.34e-08 | 23 |
respiratory system epithelium | 6.34e-08 | 23 |
hemolymphoid system gland | 6.34e-08 | 23 |
pharyngeal epithelium | 6.34e-08 | 23 |
thymic region | 6.34e-08 | 23 |
pharyngeal gland | 6.34e-08 | 23 |
entire pharyngeal arch endoderm | 6.34e-08 | 23 |
thymus primordium | 6.34e-08 | 23 |
early pharyngeal endoderm | 6.34e-08 | 23 |
gland of gut | 7.36e-08 | 24 |
lateral plate mesoderm | 8.85e-08 | 87 |
mixed endoderm/mesoderm-derived structure | 1.06e-07 | 35 |
craniocervical region | 2.70e-07 | 36 |
pharynx | 3.84e-07 | 24 |
upper respiratory tract | 3.84e-07 | 24 |
chordate pharynx | 3.84e-07 | 24 |
pharyngeal arch system | 3.84e-07 | 24 |
pharyngeal region of foregut | 3.84e-07 | 24 |
segment of respiratory tract | 6.17e-07 | 27 |